BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1770.p (544 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778064.1| acetyl/propionyl-CoA carboxylase subunit bet... 1070 0.0 ref|YP_004754905.1| methylcrotonyl-CoA carboxylase carboxyl tran... 963 0.0 ref|ZP_08275368.1| Methylcrotonyl-CoA carboxylase carboxyl trans... 934 0.0 emb|CAQ56560.1| acetyl-coa carboxylase, carboxyltransferase (sub... 931 0.0 ref|ZP_00943496.1| Methylcrotonyl-CoA carboxylase carboxyl trans... 931 0.0 >ref|YP_003778064.1| acetyl/propionyl-CoA carboxylase subunit beta [Herbaspirillum seropedicae SmR1] gb|ADJ66156.1| acetyl/propionyl-CoA carboxylase, beta subunit, protein [Herbaspirillum seropedicae SmR1] Length = 544 Score = 1070 bits (2767), Expect = 0.0, Method: Composition-based stats. Identities = 524/544 (96%), Positives = 535/544 (98%) Query: 1 MPQIESKLNPRSEEFQHNRDAMQRIVDDLRQKVAAIAEGGGQAAREKHVARGKLLPRDRV 60 MPQIESKLNPRSE+FQ+NR AMQRIVDDLR+K+AAIAEGGGQAAREKH+ARGKLLPRDRV Sbjct: 1 MPQIESKLNPRSEDFQNNRAAMQRIVDDLREKIAAIAEGGGQAAREKHLARGKLLPRDRV 60 Query: 61 QMLLDPGTPFLEFSQLAAYGMYREKDREGNLKDAAPSAGIITGIGRVAGQECVIVCNDAT 120 QMLLDPGTPFLEFSQLAAYGMYREKDR+G KDAAPSAGIITGIGRVAGQECVIVCNDAT Sbjct: 61 QMLLDPGTPFLEFSQLAAYGMYREKDRDGQPKDAAPSAGIITGIGRVAGQECVIVCNDAT 120 Query: 121 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 180 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA Sbjct: 121 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 180 Query: 181 NLSARGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQATIFLAGPPLVKAATGEVVTAEE 240 NLSA+GI QIAVVMGSCTAGGAYVPAMSDESIIVK+QATIFLAGPPLVKAATGEVV+AEE Sbjct: 181 NLSAKGIAQIAVVMGSCTAGGAYVPAMSDESIIVKDQATIFLAGPPLVKAATGEVVSAEE 240 Query: 241 LGGGDVHTRLSGVADHLAQDDTHALAIARNIVSHLNRRKPQQLALRESVEPKYPAQELYG 300 LGGGDVHTRLSGVADHLAQDDTHALAIARNIV HLNRRKPQ LALRES+EP+YPAQELYG Sbjct: 241 LGGGDVHTRLSGVADHLAQDDTHALAIARNIVGHLNRRKPQPLALRESIEPRYPAQELYG 300 Query: 301 VIPTDTRKPFDVREVIARIVDGSEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE 360 VIPTDTRKPFDVREVIARIVD SEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE Sbjct: 301 VIPTDTRKPFDVREVIARIVDASEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE 360 Query: 361 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKKAENEGIARHGAKMVTAVSTAKVPKLTV 420 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKK ENEGIARHGAKMVTAVSTAKVPKLTV Sbjct: 361 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKKYENEGIARHGAKMVTAVSTAKVPKLTV 420 Query: 421 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIETRGGSWSA 480 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIE RGGSWSA Sbjct: 421 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIEARGGSWSA 480 Query: 481 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG 540 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG Sbjct: 481 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG 540 Query: 541 VFRI 544 VFRI Sbjct: 541 VFRI 544 >ref|YP_004754905.1| methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Collimonas fungivorans Ter331] gb|AEK64082.1| Methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Collimonas fungivorans Ter331] Length = 540 Score = 963 bits (2490), Expect = 0.0, Method: Composition-based stats. Identities = 466/544 (85%), Positives = 506/544 (93%), Gaps = 4/544 (0%) Query: 1 MPQIESKLNPRSEEFQHNRDAMQRIVDDLRQKVAAIAEGGGQAAREKHVARGKLLPRDRV 60 MPQ+ESKLNPRSEEFQ N +A+ +VDDLRQKVA IAEGGG+AAR KHVARGKLLPR+RV Sbjct: 1 MPQLESKLNPRSEEFQQNANALNLLVDDLRQKVAQIAEGGGEAARNKHVARGKLLPRERV 60 Query: 61 QMLLDPGTPFLEFSQLAAYGMYREKDREGNLKDAAPSAGIITGIGRVAGQECVIVCNDAT 120 QMLLDPGTPF+EFSQLAAY +Y++KD DAAP+AG+ITGIGR+AGQECV+VCNDAT Sbjct: 61 QMLLDPGTPFMEFSQLAAYHVYKDKDGS----DAAPAAGVITGIGRIAGQECVVVCNDAT 116 Query: 121 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 180 VKGGTYYP++ KKHLRAQEIAE N+LPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA Sbjct: 117 VKGGTYYPLSVKKHLRAQEIAEQNNLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 176 Query: 181 NLSARGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQATIFLAGPPLVKAATGEVVTAEE 240 NLSA+GIPQIAVVMGSCTAGGAYVPAMSDESIIVK Q TIFLAGPPLVKAATGEVV+AE+ Sbjct: 177 NLSAKGIPQIAVVMGSCTAGGAYVPAMSDESIIVKNQGTIFLAGPPLVKAATGEVVSAED 236 Query: 241 LGGGDVHTRLSGVADHLAQDDTHALAIARNIVSHLNRRKPQQLALRESVEPKYPAQELYG 300 LGGGDVHTRLSGVADHLAQ+D HAL++AR IVS+LNR+KPQ LR EPKYPAQELYG Sbjct: 237 LGGGDVHTRLSGVADHLAQNDMHALSLARTIVSNLNRQKPQGPLLRPVAEPKYPAQELYG 296 Query: 301 VIPTDTRKPFDVREVIARIVDGSEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE 360 VIP DTRKPFDVREVIARIVDGSEFDEFKARYGTTL+CGFAH++GMPVGI+ANNGILFSE Sbjct: 297 VIPLDTRKPFDVREVIARIVDGSEFDEFKARYGTTLICGFAHIYGMPVGIVANNGILFSE 356 Query: 361 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKKAENEGIARHGAKMVTAVSTAKVPKLTV 420 AA KGTHFIELC QRKIPL+FLQNITGFMVG++ ENEGIAR+GAKMVTAV+T VPKLTV Sbjct: 357 AALKGTHFIELCSQRKIPLVFLQNITGFMVGRRYENEGIARNGAKMVTAVATTAVPKLTV 416 Query: 421 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIETRGGSWSA 480 IIGGSFGAGNYGMCGRA+SPRFLWMWPNARISVMGGEQAA VLATVKRDGIE +GGSWSA Sbjct: 417 IIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGEQAAGVLATVKRDGIEGKGGSWSA 476 Query: 481 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG 540 EEE AFK+PIR QYE QGHPYYASARLWDDGVIDPADTR+VL LGLSAALNAPI ET+FG Sbjct: 477 EEEEAFKKPIRDQYEHQGHPYYASARLWDDGVIDPADTRKVLGLGLSAALNAPIAETKFG 536 Query: 541 VFRI 544 VFR+ Sbjct: 537 VFRM 540 >ref|ZP_08275368.1| Methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF31160.1| Methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Oxalobacteraceae bacterium IMCC9480] Length = 534 Score = 934 bits (2414), Expect = 0.0, Method: Composition-based stats. Identities = 449/541 (82%), Positives = 491/541 (90%), Gaps = 9/541 (1%) Query: 4 IESKLNPRSEEFQHNRDAMQRIVDDLRQKVAAIAEGGGQAAREKHVARGKLLPRDRVQML 63 +ESKLNPR+++F+ N A+Q +VDDLR+ V IA GG AR KHV RGKLLPRDRV ML Sbjct: 3 LESKLNPRADDFKANAAAIQAVVDDLRRTVEKIALGGSDDARAKHVGRGKLLPRDRVMML 62 Query: 64 LDPGTPFLEFSQLAAYGMYREKDREGNLKDAAPSAGIITGIGRVAGQECVIVCNDATVKG 123 LDPGTPFLEFSQLAA+ +Y + APSAGIITGIGRV+G ECVIVCNDATVKG Sbjct: 63 LDPGTPFLEFSQLAAHNVY---------DNVAPSAGIITGIGRVSGLECVIVCNDATVKG 113 Query: 124 GTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQANLS 183 GTYYP+T KKHLRAQE+A+ N+LPCIYLVDSGGANLPNQD+VFPDRDHFGRIF+NQA LS Sbjct: 114 GTYYPLTVKKHLRAQEVADQNNLPCIYLVDSGGANLPNQDDVFPDRDHFGRIFFNQATLS 173 Query: 184 ARGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQATIFLAGPPLVKAATGEVVTAEELGG 243 A+GIPQ+AVVMGSCTAGGAYVPAMSDESIIVK Q TIFL GPPLVKAATGEVV+AE+LGG Sbjct: 174 AKGIPQVAVVMGSCTAGGAYVPAMSDESIIVKNQGTIFLGGPPLVKAATGEVVSAEDLGG 233 Query: 244 GDVHTRLSGVADHLAQDDTHALAIARNIVSHLNRRKPQQLALRESVEPKYPAQELYGVIP 303 GDVHTRLSGV DHLAQ+D HAL++AR IVS+LNRRKP+QLALR SVEPKYPA+ELYGVIP Sbjct: 234 GDVHTRLSGVVDHLAQNDLHALSLARTIVSNLNRRKPEQLALRASVEPKYPAEELYGVIP 293 Query: 304 TDTRKPFDVREVIARIVDGSEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSEAAE 363 DTRKPFD+ EVIARIVDGSEFDEFKARYGTTLVCGFAH+HGMPVGIIANNGILFSE+A Sbjct: 294 LDTRKPFDINEVIARIVDGSEFDEFKARYGTTLVCGFAHIHGMPVGIIANNGILFSESAL 353 Query: 364 KGTHFIELCCQRKIPLIFLQNITGFMVGKKAENEGIARHGAKMVTAVSTAKVPKLTVIIG 423 KG HFIELCCQRKIPL+FLQNITGFMVG+K ENEGIAR+GAKMVTAV+TA VPK TVIIG Sbjct: 354 KGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIARNGAKMVTAVATAAVPKFTVIIG 413 Query: 424 GSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIETRGGSWSAEEE 483 GSFGAGNYGMCGRAFSPRFLWMWPNARISVMGG+QAASVLATVKRDGIE +GG+WSA EE Sbjct: 414 GSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGDQAASVLATVKRDGIEGKGGAWSAAEE 473 Query: 484 AAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFGVFR 543 AFK+PIR QYE QGHPYYASARLWDDGVIDPADTR+VLALGLSAALNAPI ET+FGVFR Sbjct: 474 DAFKQPIRDQYEQQGHPYYASARLWDDGVIDPADTRKVLALGLSAALNAPIAETKFGVFR 533 Query: 544 I 544 + Sbjct: 534 M 534 >emb|CAQ56560.1| acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein [Ralstonia solanacearum MolK2] Length = 535 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 451/544 (82%), Positives = 490/544 (90%), Gaps = 9/544 (1%) Query: 1 MPQIESKLNPRSEEFQHNRDAMQRIVDDLRQKVAAIAEGGGQAAREKHVARGKLLPRDRV 60 MP +E+KLNPR+++F+ N DAM+ +V DLR KVA IA+GGG AR KH+ARGKLLPRDRV Sbjct: 1 MPTLETKLNPRADDFKANADAMRVLVADLRDKVARIAQGGGDDARAKHLARGKLLPRDRV 60 Query: 61 QMLLDPGTPFLEFSQLAAYGMYREKDREGNLKDAAPSAGIITGIGRVAGQECVIVCNDAT 120 Q LLDPGTPFLEFSQLAA+GMY DAAP AGIITGIGR+AGQECVIVCNDAT Sbjct: 61 QQLLDPGTPFLEFSQLAAHGMY---------DDAAPGAGIITGIGRIAGQECVIVCNDAT 111 Query: 121 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 180 VKGGTYYPMT KKHLRAQE+AE NHLPC+YLVDSGGANLPNQD+VFPDRDHFGRIFYNQA Sbjct: 112 VKGGTYYPMTVKKHLRAQEVAEQNHLPCVYLVDSGGANLPNQDDVFPDRDHFGRIFYNQA 171 Query: 181 NLSARGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQATIFLAGPPLVKAATGEVVTAEE 240 NLS++GIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQ TIFLAGPPLVKAATGEVV+AE+ Sbjct: 172 NLSSKGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQGTIFLAGPPLVKAATGEVVSAED 231 Query: 241 LGGGDVHTRLSGVADHLAQDDTHALAIARNIVSHLNRRKPQQLALRESVEPKYPAQELYG 300 LGG DVHTRLSGVAD+ A DD HALA AR IV+HLNRRKP+Q+ + VEP+YPA+ELYG Sbjct: 232 LGGADVHTRLSGVADYFANDDAHALAQARGIVAHLNRRKPEQVQIHAPVEPRYPAEELYG 291 Query: 301 VIPTDTRKPFDVREVIARIVDGSEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE 360 VIPTDTRKPFDVREVIARIVD S FDEFKARYGTTLVCGFA + G PVGI+ANNGILFSE Sbjct: 292 VIPTDTRKPFDVREVIARIVDDSAFDEFKARYGTTLVCGFARIWGYPVGIVANNGILFSE 351 Query: 361 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKKAENEGIARHGAKMVTAVSTAKVPKLTV 420 AA KG HFIELCCQRKIPL+FLQNITGFMVG+K ENEGIA++GAKMVTAV+TA+VPK TV Sbjct: 352 AALKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIAKNGAKMVTAVATAQVPKFTV 411 Query: 421 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIETRGGSWSA 480 IIGGSFGAGNYGMCGRA+SPRFLWMWPNARISVMGGEQAASVLATV+RDGIE RGG WSA Sbjct: 412 IIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGEQAASVLATVRRDGIEARGGQWSA 471 Query: 481 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG 540 +EEAAFK PIR QYE QGHPYYASARLWDDGVIDPADTR VL LGLSA+LNAPI E FG Sbjct: 472 DEEAAFKAPIREQYERQGHPYYASARLWDDGVIDPADTRSVLGLGLSASLNAPIGEMNFG 531 Query: 541 VFRI 544 VFR+ Sbjct: 532 VFRM 535 >ref|ZP_00943496.1| Methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Ralstonia solanacearum UW551] ref|YP_002258499.1| acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein [Ralstonia solanacearum IPO1609] gb|EAP74111.1| Methylcrotonyl-CoA carboxylase carboxyl transferase subunit [Ralstonia solanacearum UW551] emb|CAQ60421.1| acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein [Ralstonia solanacearum IPO1609] Length = 535 Score = 931 bits (2405), Expect = 0.0, Method: Composition-based stats. Identities = 451/544 (82%), Positives = 490/544 (90%), Gaps = 9/544 (1%) Query: 1 MPQIESKLNPRSEEFQHNRDAMQRIVDDLRQKVAAIAEGGGQAAREKHVARGKLLPRDRV 60 MP +E+KLNPR+++F+ N DAM+ +V DLR KVA IA+GGG AR KH+ARGKLLPRDRV Sbjct: 1 MPTLETKLNPRADDFKANADAMRALVADLRDKVARIAQGGGDDARAKHLARGKLLPRDRV 60 Query: 61 QMLLDPGTPFLEFSQLAAYGMYREKDREGNLKDAAPSAGIITGIGRVAGQECVIVCNDAT 120 Q LLDPGTPFLEFSQLAA+GMY DAAP AGIITGIGR+AGQECVIVCNDAT Sbjct: 61 QQLLDPGTPFLEFSQLAAHGMY---------DDAAPGAGIITGIGRIAGQECVIVCNDAT 111 Query: 121 VKGGTYYPMTAKKHLRAQEIAEFNHLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFYNQA 180 VKGGTYYPMT KKHLRAQE+AE NHLPC+YLVDSGGANLPNQD+VFPDRDHFGRIFYNQA Sbjct: 112 VKGGTYYPMTVKKHLRAQEVAEQNHLPCVYLVDSGGANLPNQDDVFPDRDHFGRIFYNQA 171 Query: 181 NLSARGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQATIFLAGPPLVKAATGEVVTAEE 240 NLS++GIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQ TIFLAGPPLVKAATGEVV+AE+ Sbjct: 172 NLSSKGIPQIAVVMGSCTAGGAYVPAMSDESIIVKEQGTIFLAGPPLVKAATGEVVSAED 231 Query: 241 LGGGDVHTRLSGVADHLAQDDTHALAIARNIVSHLNRRKPQQLALRESVEPKYPAQELYG 300 LGG DVHTRLSGVAD+ A DD HALA AR IV+HLNRRKP+Q+ + VEP+YPA+ELYG Sbjct: 232 LGGADVHTRLSGVADYFANDDAHALAQARGIVAHLNRRKPEQVQIHAPVEPRYPAEELYG 291 Query: 301 VIPTDTRKPFDVREVIARIVDGSEFDEFKARYGTTLVCGFAHLHGMPVGIIANNGILFSE 360 VIPTDTRKPFDVREVIARIVD S FDEFKARYGTTLVCGFA + G PVGI+ANNGILFSE Sbjct: 292 VIPTDTRKPFDVREVIARIVDDSAFDEFKARYGTTLVCGFARIWGYPVGIVANNGILFSE 351 Query: 361 AAEKGTHFIELCCQRKIPLIFLQNITGFMVGKKAENEGIARHGAKMVTAVSTAKVPKLTV 420 AA KG HFIELCCQRKIPL+FLQNITGFMVG+K ENEGIA++GAKMVTAV+TA+VPK TV Sbjct: 352 AALKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIAKNGAKMVTAVATAQVPKFTV 411 Query: 421 IIGGSFGAGNYGMCGRAFSPRFLWMWPNARISVMGGEQAASVLATVKRDGIETRGGSWSA 480 IIGGSFGAGNYGMCGRA+SPRFLWMWPNARISVMGGEQAASVLATV+RDGIE RGG WSA Sbjct: 412 IIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGEQAASVLATVRRDGIEARGGQWSA 471 Query: 481 EEEAAFKEPIRAQYETQGHPYYASARLWDDGVIDPADTRQVLALGLSAALNAPIEETRFG 540 +EEAAFK PIR QYE QGHPYYASARLWDDGVIDPADTR VL LGLSA+LNAPI E FG Sbjct: 472 DEEAAFKAPIREQYERQGHPYYASARLWDDGVIDPADTRSVLGLGLSASLNAPIGEMNFG 531 Query: 541 VFRI 544 VFR+ Sbjct: 532 VFRM 535