BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1767.p (452 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778061.1| isovaleryl-CoA dehydrogenase [Herbaspirillum... 771 0.0 ref|YP_004754913.1| isovaleryl-CoA dehydrogenase [Collimonas fun... 713 0.0 ref|ZP_08272804.1| Isovaleryl-CoA dehydrogenase [Oxalobacteracea... 705 0.0 ref|ZP_01913850.1| acyl-CoA dehydrogenase domain protein [Limnob... 654 0.0 ref|ZP_02381764.1| acyl-CoA dehydrogenase domain protein [Burkho... 650 0.0 >ref|YP_003778061.1| isovaleryl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ66153.1| isovaleryl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 394 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 388/394 (98%), Positives = 392/394 (99%) Query: 59 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 118 MIHLPGL+FDHGEDIAALREAVAAFA +EIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT Sbjct: 1 MIHLPGLSFDHGEDIAALREAVAAFAHSEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 60 Query: 119 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 178 V EEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLP+L Sbjct: 61 VSEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPRL 120 Query: 179 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 238 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL Sbjct: 121 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 180 Query: 239 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 298 +AGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV Sbjct: 181 EAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 240 Query: 299 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 358 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA Sbjct: 241 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 300 Query: 359 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 418 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP Sbjct: 301 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 360 Query: 419 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL 452 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL Sbjct: 361 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL 394 >ref|YP_004754913.1| isovaleryl-CoA dehydrogenase [Collimonas fungivorans Ter331] gb|AEK64090.1| Isovaleryl-CoA dehydrogenase [Collimonas fungivorans Ter331] Length = 394 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 355/393 (90%), Positives = 373/393 (94%) Query: 59 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 118 MIHLPGL FDHGEDIAALR A+ FA EI PRAAEIDRSDQFPMDLWKK+GDLG+LGIT Sbjct: 1 MIHLPGLTFDHGEDIAALRSAIQEFAAAEITPRAAEIDRSDQFPMDLWKKMGDLGLLGIT 60 Query: 119 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 178 EEYGG+G+GYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGN EQK KYLPKL Sbjct: 61 AEEEYGGSGMGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNAEQKAKYLPKL 120 Query: 179 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 238 ISGD IGALAMSEPNAGSDVVSMKLRA+ KGDR+VLNG+KMWITNGPDADVLVVYAKTDL Sbjct: 121 ISGDHIGALAMSEPNAGSDVVSMKLRAELKGDRWVLNGTKMWITNGPDADVLVVYAKTDL 180 Query: 239 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 298 +AGARGMTAFL+EK +KGFSVAQKLDKLGMRGSHTGELVFQDCEVP ENVLGG+G+GVNV Sbjct: 181 EAGARGMTAFLIEKSFKGFSVAQKLDKLGMRGSHTGELVFQDCEVPAENVLGGLGQGVNV 240 Query: 299 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 358 LMSGLD+ERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQ+IGEFQLMQGKLADMYSTMMA Sbjct: 241 LMSGLDYERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQSIGEFQLMQGKLADMYSTMMA 300 Query: 359 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 418 CKAYVYAVGQACDRA + RALRKDAAGAILYSAEKATWMAGEAIQ+LGGNGYINEYP Sbjct: 301 CKAYVYAVGQACDRAKTPAAARALRKDAAGAILYSAEKATWMAGEAIQALGGNGYINEYP 360 Query: 419 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADT 451 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFA+T Sbjct: 361 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFAET 393 >ref|ZP_08272804.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33735.1| Isovaleryl-CoA dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 394 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 346/393 (88%), Positives = 372/393 (94%) Query: 59 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 118 M+HLPGL FDHG+DIAALR+ ++ FA EIAPRA EIDR+DQFPMDLW+K+GDLGVLGIT Sbjct: 1 MLHLPGLTFDHGDDIAALRDTISQFAAAEIAPRAGEIDRTDQFPMDLWRKMGDLGVLGIT 60 Query: 119 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 178 VGEEYGG G+GYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNG+ EQK KYLPKL Sbjct: 61 VGEEYGGTGMGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGSAEQKAKYLPKL 120 Query: 179 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 238 +SG++IGALAMSEPNAGSDVVSMKLRAD KGDR+VLNG+KMWITNGPDADVLVVYAK DL Sbjct: 121 VSGEYIGALAMSEPNAGSDVVSMKLRADWKGDRWVLNGTKMWITNGPDADVLVVYAKNDL 180 Query: 239 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 298 +AGARGMTAFL+EK +KGFSVAQKLDKLGMRGSHTGELVF+DCEVP ENVLGG+G+GVNV Sbjct: 181 EAGARGMTAFLIEKDFKGFSVAQKLDKLGMRGSHTGELVFRDCEVPAENVLGGLGKGVNV 240 Query: 299 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 358 LMSGLD+ER+VLSGGPLGIMQACMDV VPYVHDRKQFGQ IGEFQLMQGKLADMYSTMMA Sbjct: 241 LMSGLDYERAVLSGGPLGIMQACMDVAVPYVHDRKQFGQPIGEFQLMQGKLADMYSTMMA 300 Query: 359 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 418 CKAYVYAVGQACDRA S + VRALRKDAAGAILYSAEKATWMAGE IQ+LGGNGYINEYP Sbjct: 301 CKAYVYAVGQACDRAASPEAVRALRKDAAGAILYSAEKATWMAGETIQALGGNGYINEYP 360 Query: 419 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADT 451 GRLWRDAKLYEIGAGTSEIRRMLIGRELF +T Sbjct: 361 AGRLWRDAKLYEIGAGTSEIRRMLIGRELFNET 393 >ref|ZP_01913850.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105] gb|EDM84911.1| acyl-CoA dehydrogenase domain protein [Limnobacter sp. MED105] Length = 393 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 320/394 (81%), Positives = 361/394 (91%), Gaps = 1/394 (0%) Query: 59 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 118 M++LPGL FD GEDI ALR+AV FAQ EIAP AAE+D++DQFPM LW+K+GD+G+LG+T Sbjct: 1 MLNLPGLQFDLGEDIDALRDAVQTFAQAEIAPLAAEMDKTDQFPMHLWRKMGDMGLLGLT 60 Query: 119 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 178 V EE GG+G+GYLAHI+AMEEISRASASV LSYGAHSNLCVNQI+RNG + Q++ +LPKL Sbjct: 61 VEEELGGSGMGYLAHIVAMEEISRASASVALSYGAHSNLCVNQIRRNGTDWQRKTFLPKL 120 Query: 179 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 238 ISG+ IGALAMSEP AGSDVVSM+LRADKKGD+YVLNG+KMWITNGPDADVLVVYAKTDL Sbjct: 121 ISGEHIGALAMSEPGAGSDVVSMQLRADKKGDKYVLNGNKMWITNGPDADVLVVYAKTDL 180 Query: 239 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 298 AG G+TAFL+EK +KGFS+AQKLDKLGMRGSHTGELVF+DCEVPE +VLG VGRGVNV Sbjct: 181 AAGPHGITAFLIEKNFKGFSIAQKLDKLGMRGSHTGELVFEDCEVPETHVLGKVGRGVNV 240 Query: 299 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 358 LMSGLDFER+VLSGGPLGIM A MDVVVPYVHDRKQFGQ+IGEFQL+QGKLADMYSTMMA Sbjct: 241 LMSGLDFERAVLSGGPLGIMAAAMDVVVPYVHDRKQFGQSIGEFQLIQGKLADMYSTMMA 300 Query: 359 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 418 +AYVY VG+ACD+A + + VR LRKD AGAILYSAEKATWMAGE+IQ LGGNGYINEYP Sbjct: 301 TRAYVYQVGKACDKA-TPETVRKLRKDCAGAILYSAEKATWMAGESIQILGGNGYINEYP 359 Query: 419 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL 452 GRLWRDAKLYEIGAGTSEIRRMLIGRELF++T+ Sbjct: 360 CGRLWRDAKLYEIGAGTSEIRRMLIGRELFSETM 393 >ref|ZP_02381764.1| acyl-CoA dehydrogenase domain protein [Burkholderia ubonensis Bu] Length = 393 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 319/394 (80%), Positives = 354/394 (89%), Gaps = 1/394 (0%) Query: 59 MIHLPGLNFDHGEDIAALREAVAAFAQTEIAPRAAEIDRSDQFPMDLWKKLGDLGVLGIT 118 MI+LPG+ F GEDI LR+AVA FA EIAPRAAE+DR+DQFPMDLWKK GDLGVLG+T Sbjct: 1 MINLPGVQFMLGEDIEMLRDAVANFAAKEIAPRAAEVDRTDQFPMDLWKKFGDLGVLGMT 60 Query: 119 VGEEYGGAGLGYLAHIIAMEEISRASASVGLSYGAHSNLCVNQIKRNGNEEQKRKYLPKL 178 V EEYGGA +GY AH++AMEEISRASAS+GLSYGAHSNLCVNQI RNG E QKRKYLPKL Sbjct: 61 VSEEYGGANMGYTAHMVAMEEISRASASIGLSYGAHSNLCVNQIHRNGTEAQKRKYLPKL 120 Query: 179 ISGDFIGALAMSEPNAGSDVVSMKLRADKKGDRYVLNGSKMWITNGPDADVLVVYAKTDL 238 +SG+ IGALAMSEPNAGSDVVSMKLRADK+GDRYVLNG+KMWITNGPD D LVVYAKTD+ Sbjct: 121 VSGEHIGALAMSEPNAGSDVVSMKLRADKRGDRYVLNGTKMWITNGPDCDTLVVYAKTDI 180 Query: 239 DAGARGMTAFLVEKGYKGFSVAQKLDKLGMRGSHTGELVFQDCEVPEENVLGGVGRGVNV 298 +AG RG+TAF+VEKG KGFSVAQKLDKLGMRGSHTGELVF+D EVPEEN+LG + GV V Sbjct: 181 EAGPRGITAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFEDVEVPEENILGQLNGGVKV 240 Query: 299 LMSGLDFERSVLSGGPLGIMQACMDVVVPYVHDRKQFGQAIGEFQLMQGKLADMYSTMMA 358 LMSGLD+ER+VLSGGP GIM AC+D VVPY+HDRKQFGQAIGEFQL+QGK+ADMY+T A Sbjct: 241 LMSGLDYERAVLSGGPTGIMAACLDAVVPYIHDRKQFGQAIGEFQLIQGKVADMYTTFQA 300 Query: 359 CKAYVYAVGQACDRADSADKVRALRKDAAGAILYSAEKATWMAGEAIQSLGGNGYINEYP 418 C+AY+YAVG+ D A S D +R +RKD AG ILY+AEKATWMAGEAIQ LGGNGYINEYP Sbjct: 301 CRAYLYAVGRHLDSAGS-DHIRQVRKDCAGVILYTAEKATWMAGEAIQILGGNGYINEYP 359 Query: 419 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFADTL 452 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFA+TL Sbjct: 360 VGRLWRDAKLYEIGAGTSEIRRMLIGRELFAETL 393