BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1760.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003778052.1| hypothetical protein Hsero_4678 [Herbaspiril...   291   2e-77
ref|YP_001351830.1| Smg protein [Janthinobacterium sp. Marseille...   248   2e-64
ref|YP_004754750.1| hypothetical protein CFU_4105 [Collimonas fu...   233   7e-60
sp|A4G1G4|SMG_HERAR RecName: Full=Protein smg homolog >gi|193222...   233   7e-60
ref|ZP_08275975.1| hypothetical protein IMCC9480_1259 [Oxalobact...   231   2e-59

>ref|YP_003778052.1| hypothetical protein Hsero_4678 [Herbaspirillum seropedicae SmR1]
 gb|ADJ66144.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 158

 Score =  291 bits (745), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 152/158 (96%), Positives = 155/158 (98%)

Query: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60
           MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP
Sbjct: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60

Query: 61  RQTAFSFGTRIYATQESDILGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPITLE 120
           RQTAFSFGTRIYA QESD+LGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAP+ LE
Sbjct: 61  RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120

Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEDDTEPRLLH 158
           KLKVIVLMVLWSQGKEPDGLMFEELFLDE+D EPRLLH
Sbjct: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158


>ref|YP_001351830.1| Smg protein [Janthinobacterium sp. Marseille]
 sp|A6SU83|SMG_JANMA RecName: Full=Protein smg homolog
 gb|ABR90299.1| Smg protein [Janthinobacterium sp. Marseille]
          Length = 158

 Score =  248 bits (634), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 123/158 (77%), Positives = 144/158 (91%)

Query: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60
           MFDVLVYLYETYYRPDACP+ EALVKKLSAIGFEE+EI++ALGWLT L    +E +D+YP
Sbjct: 1   MFDVLVYLYETYYRPDACPDSEALVKKLSAIGFEEEEIAKALGWLTALAETTNELSDSYP 60

Query: 61  RQTAFSFGTRIYATQESDILGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPITLE 120
            QTAFSFG RIYATQE D+LG  A+GFIQFLESAK+++P+QREIVIERALAAGE+PI+LE
Sbjct: 61  HQTAFSFGIRIYATQEMDVLGTPAVGFIQFLESAKLINPVQREIVIERALAAGESPISLE 120

Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEDDTEPRLLH 158
           KLKVIVLMVLWSQGKEPDGL+F+ELF+D++D  PR+LH
Sbjct: 121 KLKVIVLMVLWSQGKEPDGLIFDELFVDDEDAPPRMLH 158


>ref|YP_004754750.1| hypothetical protein CFU_4105 [Collimonas fungivorans Ter331]
 gb|AEK63927.1| Protein of unknown function Smg [Collimonas fungivorans Ter331]
          Length = 159

 Score =  233 bits (594), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 131/159 (82%), Positives = 143/159 (89%), Gaps = 1/159 (0%)

Query: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60
           MF+VLVYLYETYYRPDACPEPEALVKKLSAIGFEE+EI++ALGWLTDL   NHEFAD YP
Sbjct: 1   MFEVLVYLYETYYRPDACPEPEALVKKLSAIGFEEEEIAKALGWLTDLAETNHEFADKYP 60

Query: 61  RQTAFSFGTRIYATQESDILGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPITLE 120
           +QTAFSFG RIYA QE D+LG+ AIGFIQFLESAKML+P+QREIVIERAL   E P+ L+
Sbjct: 61  QQTAFSFGIRIYAQQEIDVLGIPAIGFIQFLESAKMLNPVQREIVIERALTVSETPVPLD 120

Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEDDT-EPRLLH 158
           KLKVIVLMVLWSQGKEPDGLMF+ELFLDEDD  EPR LH
Sbjct: 121 KLKVIVLMVLWSQGKEPDGLMFDELFLDEDDDPEPRQLH 159


>sp|A4G1G4|SMG_HERAR RecName: Full=Protein smg homolog
 emb|CAL60351.2| conserved hypothetical protein; putative smg protein [Herminiimonas
           arsenicoxydans]
          Length = 158

 Score =  233 bits (594), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 123/158 (77%), Positives = 144/158 (91%)

Query: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60
           MFDVLVYLYETYYRPDACP+ EALVKKLSA+GFEE+EI++ALGWLT L    +E +D+YP
Sbjct: 1   MFDVLVYLYETYYRPDACPDSEALVKKLSAVGFEEEEITKALGWLTALAETTNELSDSYP 60

Query: 61  RQTAFSFGTRIYATQESDILGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPITLE 120
            QTAFSFGTRIY +QE+D+LG  A+GFIQFLE+AK+++PIQREIVIERALAAGE PI+LE
Sbjct: 61  HQTAFSFGTRIYVSQETDVLGTPAVGFIQFLEAAKLINPIQREIVIERALAAGETPISLE 120

Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEDDTEPRLLH 158
           KLKVIVLMVLWSQGKEPDGL+F+ELFLD+DD  PR+LH
Sbjct: 121 KLKVIVLMVLWSQGKEPDGLIFDELFLDDDDAAPRILH 158


>ref|ZP_08275975.1| hypothetical protein IMCC9480_1259 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30556.1| hypothetical protein IMCC9480_1259 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 158

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/158 (74%), Positives = 131/158 (82%)

Query: 1   MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60
           MFDVLVYLYETYYRPDACP P ALVKKLSAIGF++DEI+ AL WLTDL       A  YP
Sbjct: 1   MFDVLVYLYETYYRPDACPPPAALVKKLSAIGFDDDEITSALDWLTDLAQTTTTLAGQYP 60

Query: 61  RQTAFSFGTRIYATQESDILGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPITLE 120
           +Q AFSFGTRIY  QE D LG  A+GFIQFLE+AK+L+P+QREIVIERALA     I+L+
Sbjct: 61  QQAAFSFGTRIYVQQEMDALGTAAVGFIQFLEAAKLLNPVQREIVIERALAVSGTLISLD 120

Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEDDTEPRLLH 158
           KLKVIVLMVLWSQGKEPDGLMF+ELFLD+D+ EPR LH
Sbjct: 121 KLKVIVLMVLWSQGKEPDGLMFDELFLDDDEPEPRQLH 158