BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1759.p (878 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778051.1| DNA topoisomerase III protein [Herbaspirillu... 1650 0.0 ref|YP_004754749.1| DNA topoisomerase III [Collimonas fungivoran... 1504 0.0 ref|YP_001351829.1| DNA topoisomerase III [Janthinobacterium sp.... 1459 0.0 ref|YP_001098479.1| DNA topoisomerase III [Herminiimonas arsenic... 1457 0.0 ref|ZP_08275976.1| DNA topoisomerase III [Oxalobacteraceae bacte... 1449 0.0 >ref|YP_003778051.1| DNA topoisomerase III protein [Herbaspirillum seropedicae SmR1] gb|ADJ66143.1| DNA topoisomerase III protein [Herbaspirillum seropedicae SmR1] Length = 892 Score = 1650 bits (4274), Expect = 0.0, Method: Composition-based stats. Identities = 819/825 (99%), Positives = 824/825 (99%) Query: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYILSSAVGHLLEIAVPEEYDVKRGK 60 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESD+YILSSAVGHLLEIAVPEEYDVKRGK Sbjct: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDQYILSSAVGHLLEIAVPEEYDVKRGK 60 Query: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY Sbjct: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 Query: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA Sbjct: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 Query: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK Sbjct: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 Query: 241 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA 300 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA Sbjct: 241 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA 300 Query: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS 360 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS Sbjct: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS 360 Query: 361 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA 420 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA Sbjct: 361 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA 420 Query: 421 EFQVTTRFTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGSGNLVAVAPGEKVKT 480 EFQVTTR+TEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEG GNLVAVAPGEKVKT Sbjct: 421 EFQVTTRYTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGGGNLVAVAPGEKVKT 480 Query: 481 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL 540 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL Sbjct: 481 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL 540 Query: 541 NEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM 600 NEKYL+REGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM Sbjct: 541 NEKYLIREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM 600 Query: 601 REIAQMTQIIVKRAKEYDNDTIPGDYATLQTPCPNCGGVVKENYRRFACTKCEFSMSKVP 660 REIAQMTQIIVKRAKEYDNDTIPGDYATL+TPCPNCGGVVKENYRRFACTKCEFSMSKVP Sbjct: 601 REIAQMTQIIVKRAKEYDNDTIPGDYATLKTPCPNCGGVVKENYRRFACTKCEFSMSKVP 660 Query: 661 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQAD 720 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQA+ Sbjct: 661 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQAE 720 Query: 721 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE 780 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE Sbjct: 721 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE 780 Query: 781 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEER 825 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEER Sbjct: 781 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEER 825 >ref|YP_004754749.1| DNA topoisomerase III [Collimonas fungivorans Ter331] gb|AEK63926.1| DNA topoisomerase III [Collimonas fungivorans Ter331] Length = 880 Score = 1504 bits (3895), Expect = 0.0, Method: Composition-based stats. Identities = 750/846 (88%), Positives = 788/846 (93%), Gaps = 1/846 (0%) Query: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYILSSAVGHLLEIAVPEEYDVKRGK 60 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEY+LSSAVGHLLEIAVPEEYDVKRGK Sbjct: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYVLSSAVGHLLEIAVPEEYDVKRGK 60 Query: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 W+FTHLPMIPPHFALNPIAKTESRLKVL+KLIKRKDVT LINACDAGREGELIFRLIAQY Sbjct: 61 WTFTHLPMIPPHFALNPIAKTESRLKVLNKLIKRKDVTALINACDAGREGELIFRLIAQY 120 Query: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 TKAKQPVKRLWLQSMTPGAIR+GF HLR+D++MLPLA+AARCRSEADWLIGINGTRAMTA Sbjct: 121 TKAKQPVKRLWLQSMTPGAIRDGFTHLREDKDMLPLADAARCRSEADWLIGINGTRAMTA 180 Query: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRD+WEV AEFVCAAGIY+GRWLD Sbjct: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDFWEVRAEFVCAAGIYEGRWLDT 240 Query: 241 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA 300 HKKDE DPEKR ERLWSKAAA+SIVAACR K G V EESKPTT M+P LFDLTSLQREA Sbjct: 241 AHKKDENDPEKRAERLWSKAAAESIVAACRGKMGAVREESKPTTSMAPALFDLTSLQREA 300 Query: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS 360 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDY++TVK +E ++ENNNY QF+ Sbjct: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYLSTVKQALETVSENNNYQQFA 360 Query: 361 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA 420 QIL +GWVKPNKRIFDNTKISDHFAIIPTTQ PKNLSEPEQKLYDLVTRRFMAVFFP A Sbjct: 361 AQILNKGWVKPNKRIFDNTKISDHFAIIPTTQAPKNLSEPEQKLYDLVTRRFMAVFFPAA 420 Query: 421 EFQVTTRFTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGSGNLVAVAPGEKVKT 480 EFQVTTR+TEVSGHQFK+EGKVM NPGWLAIYGK+ D+KD E SG LVAVA EKVKT Sbjct: 421 EFQVTTRYTEVSGHQFKTEGKVMTNPGWLAIYGKEA-ADEKDPENSGTLVAVAKDEKVKT 479 Query: 481 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL 540 DK+TANGLVTKPPARYTEATLLSAMEGAGKL+D ELREAMAGKGLGTPATRAA IEGLL Sbjct: 480 DKITANGLVTKPPARYTEATLLSAMEGAGKLLDDGELREAMAGKGLGTPATRAATIEGLL 539 Query: 541 NEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM 600 EKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKL+Q+ERG ISR+EFM Sbjct: 540 YEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLSQIERGTISREEFM 599 Query: 601 REIAQMTQIIVKRAKEYDNDTIPGDYATLQTPCPNCGGVVKENYRRFACTKCEFSMSKVP 660 REIAQ+TQIIVKRAKEYDNDTIPGDYATL PCPNCG VVKENYRRFACTKCEFSMSK P Sbjct: 600 REIAQLTQIIVKRAKEYDNDTIPGDYATLLAPCPNCGSVVKENYRRFACTKCEFSMSKTP 659 Query: 661 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQAD 720 G RQFEI+EVEELL RTIGPLQGFRSKMGRPFAAILKISRDEEIKN+KLEFDFGQ+ + Sbjct: 660 GSRQFEISEVEELLTKRTIGPLQGFRSKMGRPFAAILKISRDEEIKNYKLEFDFGQNDDE 719 Query: 721 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE 780 GE GE VDF+ QT LG CPKCG+GVYEMGLAYVCEK VAKPKACDFRS RIILQQEILPE Sbjct: 720 GEDGEGVDFTGQTALGPCPKCGNGVYEMGLAYVCEKAVAKPKACDFRSGRIILQQEILPE 779 Query: 781 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEERKAKAPAKGKAAAAAA 840 QM KLLNDGKTDLLPGFISQRTRRPFKAFLV+GKDGK+SFEFEERKAKAP KGKA AAA Sbjct: 780 QMVKLLNDGKTDLLPGFISQRTRRPFKAFLVKGKDGKVSFEFEERKAKAPPKGKAKAAAV 839 Query: 841 DDGADE 846 + DE Sbjct: 840 EGEEDE 845 >ref|YP_001351829.1| DNA topoisomerase III [Janthinobacterium sp. Marseille] gb|ABR88783.1| DNA topoisomerase III [Janthinobacterium sp. Marseille] Length = 881 Score = 1459 bits (3776), Expect = 0.0, Method: Composition-based stats. Identities = 717/825 (86%), Positives = 766/825 (92%), Gaps = 2/825 (0%) Query: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYILSSAVGHLLEIAVPEEYDVKRGK 60 M+KTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEY+LSSAVGHL+EI VPEEYDVKRGK Sbjct: 1 MTKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYVLSSAVGHLVEITVPEEYDVKRGK 60 Query: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 W+FTHLPMIPPHFALNPIAKTESRLKVL+KLIKRKDVT LINACDAGREGELIFRLIAQY Sbjct: 61 WTFTHLPMIPPHFALNPIAKTESRLKVLNKLIKRKDVTGLINACDAGREGELIFRLIAQY 120 Query: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 TKAKQP+KRLWLQSMTPGAIRE F +LR D+EMLPLA+AARCRSEADWLIGINGTRAMTA Sbjct: 121 TKAKQPIKRLWLQSMTPGAIREAFKNLRSDDEMLPLADAARCRSEADWLIGINGTRAMTA 180 Query: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEV AEF+CAAGIY+GRWLD Sbjct: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVRAEFICAAGIYQGRWLDT 240 Query: 241 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA 300 KKDE DPE+R ERLWSKAAA+SIVAACR K GNVTEESKPTT M+P LFDLTSLQREA Sbjct: 241 AFKKDETDPERRAERLWSKAAAESIVAACRGKQGNVTEESKPTTSMAPALFDLTSLQREA 300 Query: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS 360 N+RFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDY+ TV T++ +AENNNYHQF+ Sbjct: 301 NARFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYLPTVLQTLDVIAENNNYHQFA 360 Query: 361 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA 420 KQI WVKPNKRIFDNTKISDHFAIIPTTQ PKNLSEPEQKLYDLVTRRFMA+FFP A Sbjct: 361 KQITDNKWVKPNKRIFDNTKISDHFAIIPTTQAPKNLSEPEQKLYDLVTRRFMAIFFPAA 420 Query: 421 EFQVTTRFTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGSGNLVAVAPGEKVKT 480 EFQVTTRFTEVSGHQFK+EGKVM NPGWLA+YGK+V D+KD E SG LV VA GEKVKT Sbjct: 421 EFQVTTRFTEVSGHQFKTEGKVMTNPGWLAVYGKEV-IDEKDPENSGTLVPVAKGEKVKT 479 Query: 481 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL 540 + V ANGLVTKPPARY+EATLLSAMEGAGKL+D+D LR+AMAGKGLGTPATRAAIIEGLL Sbjct: 480 ESVVANGLVTKPPARYSEATLLSAMEGAGKLIDNDGLRDAMAGKGLGTPATRAAIIEGLL 539 Query: 541 NEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM 600 NEKYLLREGREM+PTAKAFQLMTLL GLGV+ELT PELTGEWE+KL++MERGKISR+EFM Sbjct: 540 NEKYLLREGREMIPTAKAFQLMTLLRGLGVNELTAPELTGEWEYKLSEMERGKISREEFM 599 Query: 601 REIAQMTQIIVKRAKEYDNDTIPGDYATLQTPCPNCGGVVKENYRRFACTKCEFSMSKVP 660 REIAQMTQ+IVKRAKEYDNDTIPGDYATL+TPCPNCGGVVKENYRRFACTKCEFSMSK P Sbjct: 600 REIAQMTQVIVKRAKEYDNDTIPGDYATLKTPCPNCGGVVKENYRRFACTKCEFSMSKTP 659 Query: 661 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQAD 720 G RQFEIAEVEELL N+TIGPLQGFRSKMGRPFAA+LKISRDEEIKN+KLEFDFGQ+ D Sbjct: 660 GSRQFEIAEVEELLTNKTIGPLQGFRSKMGRPFAAVLKISRDEEIKNYKLEFDFGQND-D 718 Query: 721 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE 780 E E VDFS QT LG CPKC GVYE+ L+YVCE +VAKPK CDFRS RIILQQEILPE Sbjct: 719 DENAEAVDFSGQTSLGPCPKCAGGVYELPLSYVCENSVAKPKTCDFRSGRIILQQEILPE 778 Query: 781 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEER 825 QM+KLLN+GKTDLLPGF+SQRTRR FKA+LVRGKDGK SFEFE R Sbjct: 779 QMSKLLNEGKTDLLPGFVSQRTRRAFKAYLVRGKDGKTSFEFEPR 823 >ref|YP_001098479.1| DNA topoisomerase III [Herminiimonas arsenicoxydans] emb|CAL60350.1| putative Bacterial DNA topoisomerase [Herminiimonas arsenicoxydans] Length = 878 Score = 1457 bits (3772), Expect = 0.0, Method: Composition-based stats. Identities = 720/835 (86%), Positives = 770/835 (92%), Gaps = 4/835 (0%) Query: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYILSSAVGHLLEIAVPEEYDVKRGK 60 M+KTLIIAEKPSVANDIAKTLGGFTKHD+YFESDEY+LSSAVGHL+EI+VPEEYDVKRGK Sbjct: 1 MTKTLIIAEKPSVANDIAKTLGGFTKHDDYFESDEYVLSSAVGHLVEISVPEEYDVKRGK 60 Query: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 WSF HLPMIPP+FALNPIAKTESRLKVL+KLIKRKDVT LINACDAGREGELIFRLIAQY Sbjct: 61 WSFAHLPMIPPYFALNPIAKTESRLKVLNKLIKRKDVTGLINACDAGREGELIFRLIAQY 120 Query: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 KAKQP+KRLWLQSMTPGAIRE F +LR DEEML LA+AAR RSEADWLIGINGTRAMTA Sbjct: 121 AKAKQPIKRLWLQSMTPGAIREAFKNLRSDEEMLSLADAARSRSEADWLIGINGTRAMTA 180 Query: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEV AEF+CAAGIY+GRWLD Sbjct: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVRAEFICAAGIYQGRWLDT 240 Query: 241 GHKKDEADPEKRPERLWSKAAADSIVAACR-DKPGNVTEESKPTTQMSPGLFDLTSLQRE 299 KKDE DPE+RPERLWSKAAA+SIVAACR KPGNVTEESKPTT M+P LFDLTSLQRE Sbjct: 241 AFKKDETDPERRPERLWSKAAAESIVAACRGGKPGNVTEESKPTTSMAPALFDLTSLQRE 300 Query: 300 ANSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQF 359 AN+RFGFSAKNTLGLAQALYE+HKVLTYPRTDSRHLPEDY+ TV +T+E +AENNNYHQF Sbjct: 301 ANARFGFSAKNTLGLAQALYERHKVLTYPRTDSRHLPEDYLPTVLETLEVVAENNNYHQF 360 Query: 360 SKQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPP 419 +KQIL WVKPNKRIFDNTKISDHFAIIPTT PKNLSEPEQKLYDLVTRRFMA+FFP Sbjct: 361 AKQILNSKWVKPNKRIFDNTKISDHFAIIPTTLAPKNLSEPEQKLYDLVTRRFMAIFFPA 420 Query: 420 AEFQVTTRFTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGSGNLVAVAPGEKVK 479 AEFQVTTRFTEVSGHQFK+EGKVM NPGWLA+YGK+V D+KD E SG LV VA GEKV+ Sbjct: 421 AEFQVTTRFTEVSGHQFKTEGKVMTNPGWLAVYGKEV-IDEKDPENSGTLVPVAKGEKVQ 479 Query: 480 TDKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGL 539 T+ V ANGLVTKPPARYTEATLLSAMEGAGKL+D +LR AM GKGLGTPATRAAIIEGL Sbjct: 480 TESVVANGLVTKPPARYTEATLLSAMEGAGKLIDDSDLRVAMTGKGLGTPATRAAIIEGL 539 Query: 540 LNEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEF 599 L EKYLLREGREMMPTAKAFQLMTLL GLGV+ELT PELTGEWE+KL++MERGKISR+EF Sbjct: 540 LTEKYLLREGREMMPTAKAFQLMTLLRGLGVNELTAPELTGEWEYKLSEMERGKISREEF 599 Query: 600 MREIAQMTQIIVKRAKEYDNDTIPGDYATLQTPCPNCGGVVKENYRRFACTKCEFSMSKV 659 MREIAQMTQ+IVKRAKEYDNDTIPGDYATL+TPCPNCG VVKENYRRFACTKCEFSMSK Sbjct: 600 MREIAQMTQVIVKRAKEYDNDTIPGDYATLKTPCPNCGSVVKENYRRFACTKCEFSMSKT 659 Query: 660 PGGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQA 719 PG RQFE+AEVEELL N+TIGPLQGFRSKMGRPFAA+LKISRDEEIKN+KLEFDFGQ+ Sbjct: 660 PGSRQFEVAEVEELLTNKTIGPLQGFRSKMGRPFAAVLKISRDEEIKNYKLEFDFGQN-- 717 Query: 720 DGEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILP 779 D E EPVDFS+QTPLG CPKC GVYEM L+YVCE +VAKPK CDFRS RIILQQEILP Sbjct: 718 DDENAEPVDFSDQTPLGPCPKCAGGVYEMPLSYVCENSVAKPKTCDFRSGRIILQQEILP 777 Query: 780 EQMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEERKAKAPAKGK 834 EQM+KLLN+GKTDLLPGF+SQRTRR FKA+LVRGKDGK SFEFE RK K P KGK Sbjct: 778 EQMSKLLNEGKTDLLPGFVSQRTRRAFKAYLVRGKDGKTSFEFEPRKEKVPGKGK 832 >ref|ZP_08275976.1| DNA topoisomerase III [Oxalobacteraceae bacterium IMCC9480] gb|EGF30557.1| DNA topoisomerase III [Oxalobacteraceae bacterium IMCC9480] Length = 884 Score = 1449 bits (3752), Expect = 0.0, Method: Composition-based stats. Identities = 724/843 (85%), Positives = 781/843 (92%), Gaps = 1/843 (0%) Query: 1 MSKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYILSSAVGHLLEIAVPEEYDVKRGK 60 M+KTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEY+LSSAVGHLLEIAVPEE+D+KRGK Sbjct: 1 MTKTLIIAEKPSVANDIAKTLGGFTKHDEYFESDEYVLSSAVGHLLEIAVPEEFDIKRGK 60 Query: 61 WSFTHLPMIPPHFALNPIAKTESRLKVLSKLIKRKDVTTLINACDAGREGELIFRLIAQY 120 WSF HLPMIPP+FAL PIAKTE+RLKVL++LIKRKDVT LINACDAGREGELIFRLIAQ Sbjct: 61 WSFAHLPMIPPYFALTPIAKTEARLKVLNRLIKRKDVTALINACDAGREGELIFRLIAQN 120 Query: 121 TKAKQPVKRLWLQSMTPGAIREGFAHLRDDEEMLPLANAARCRSEADWLIGINGTRAMTA 180 KAKQP+KRLWLQSMTPGAIRE F +LRDD EMLPLA+AARCRSEADWLIGINGTRAMTA Sbjct: 121 AKAKQPIKRLWLQSMTPGAIREAFTNLRDDAEMLPLADAARCRSEADWLIGINGTRAMTA 180 Query: 181 FNSKEGGFYLTTVGRVQTPTLSIVVEREEKIKKFVPRDYWEVHAEFVCAAGIYKGRWLDK 240 FNSKEGGFYLTTVGRVQTPTLSIVV REEKIKKFV RD+WEV A+FVCAAG+Y+GRWLD Sbjct: 181 FNSKEGGFYLTTVGRVQTPTLSIVVLREEKIKKFVARDFWEVRADFVCAAGVYEGRWLDT 240 Query: 241 GHKKDEADPEKRPERLWSKAAADSIVAACRDKPGNVTEESKPTTQMSPGLFDLTSLQREA 300 KKDE DPEKR ERLWSKAAA+SIVAACR K GNVTEESKPTT M+PGLFDLTSLQREA Sbjct: 241 KFKKDETDPEKRAERLWSKAAAESIVAACRTKQGNVTEESKPTTSMAPGLFDLTSLQREA 300 Query: 301 NSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYINTVKDTMEALAENNNYHQFS 360 N+RFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYI+TVK+T+E ++ENNNY+QF+ Sbjct: 301 NARFGFSAKNTLGLAQALYEKHKVLTYPRTDSRHLPEDYISTVKETLETVSENNNYYQFA 360 Query: 361 KQILKQGWVKPNKRIFDNTKISDHFAIIPTTQVPKNLSEPEQKLYDLVTRRFMAVFFPPA 420 QIL WVKPNKRIFDNTKISDHFAIIPTTQ PKNLSEPEQKLYDLVTRRF+A+FFP A Sbjct: 361 AQILNGNWVKPNKRIFDNTKISDHFAIIPTTQAPKNLSEPEQKLYDLVTRRFLAIFFPAA 420 Query: 421 EFQVTTRFTEVSGHQFKSEGKVMINPGWLAIYGKQVEEDDKDKEGSGNLVAVAPGEKVKT 480 EFQVTTRFTEVSGHQFK+EGKVM+NPGWLA+YGK V D K +G G LVAVA GEKV+T Sbjct: 421 EFQVTTRFTEVSGHQFKTEGKVMVNPGWLAVYGKDV-VDPKAADGDGTLVAVAKGEKVQT 479 Query: 481 DKVTANGLVTKPPARYTEATLLSAMEGAGKLVDSDELREAMAGKGLGTPATRAAIIEGLL 540 D + ANGLVTKPPARYTEATLLSAMEGAGKL+D +ELR+AMAGKGLGTPATRAA IEGL+ Sbjct: 480 DTIVANGLVTKPPARYTEATLLSAMEGAGKLIDDEELRDAMAGKGLGTPATRAATIEGLI 539 Query: 541 NEKYLLREGREMMPTAKAFQLMTLLHGLGVDELTEPELTGEWEHKLAQMERGKISRDEFM 600 NE+YLLREGREM+PTAKAFQLMTLL GLGV+ELT PELTGEWE+KL+QMERGKISR+EFM Sbjct: 540 NERYLLREGREMIPTAKAFQLMTLLRGLGVNELTAPELTGEWEYKLSQMERGKISREEFM 599 Query: 601 REIAQMTQIIVKRAKEYDNDTIPGDYATLQTPCPNCGGVVKENYRRFACTKCEFSMSKVP 660 REIAQMTQIIVKRAKEYDN TIPGDY TL+TPCPNCG VVKENYRRFACTKCEFSMSK P Sbjct: 600 REIAQMTQIIVKRAKEYDNVTIPGDYTTLKTPCPNCGAVVKENYRRFACTKCEFSMSKTP 659 Query: 661 GGRQFEIAEVEELLQNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNFKLEFDFGQDQAD 720 G RQFEI EVEELL NRTIGPLQGFRSKMGRPFAAILKISRDEEIKN KLEFDFGQ+ + Sbjct: 660 GSRQFEIPEVEELLTNRTIGPLQGFRSKMGRPFAAILKISRDEEIKNCKLEFDFGQNDEE 719 Query: 721 GEGGEPVDFSEQTPLGACPKCGSGVYEMGLAYVCEKTVAKPKACDFRSSRIILQQEILPE 780 GE GE VDF+ QT LG CPKC +GV+E+GLAYVCEK+VAKPK CDFRS RIILQQEILPE Sbjct: 720 GENGEGVDFTGQTALGPCPKCANGVFELGLAYVCEKSVAKPKECDFRSGRIILQQEILPE 779 Query: 781 QMAKLLNDGKTDLLPGFISQRTRRPFKAFLVRGKDGKISFEFEERKAKAPAKGKAAAAAA 840 QM KLLN+GKTDL+PGF+SQRTRRPFKAFLV+GKDGK+SFEFEERKAKAPAKGKAAA A Sbjct: 780 QMVKLLNEGKTDLMPGFVSQRTRRPFKAFLVKGKDGKVSFEFEERKAKAPAKGKAAAVDA 839 Query: 841 DDG 843 D+G Sbjct: 840 DEG 842