BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1754.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777810.1| cobalt-zinc-cadmium resistance cation efflux...   191   4e-47
ref|YP_003846723.1| outer membrane efflux protein [Gallionella c...   135   2e-30
ref|YP_001099899.1| cobalt-zinc-cadmium resistance protein CzcC ...   134   3e-30
ref|YP_001353484.1| cobalt-zinc-cadmium outer membrane resistanc...   134   4e-30
ref|YP_001353462.1| cobalt-zinc-cadmium outer membrane resistanc...   126   1e-27

>ref|YP_003777810.1| cobalt-zinc-cadmium resistance cation efflux system outer membrane
           protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65902.1| cobalt-zinc-cadmium resistance cation efflux system outer membrane
           protein [Herbaspirillum seropedicae SmR1]
          Length = 428

 Score =  191 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 100/109 (91%), Positives = 103/109 (94%)

Query: 1   MWVVGISVPIPVFDSNKGNELEALKRVDKARDELSVVEVQMQSEAAQSFERLRNARDEAA 60
           MWVVG SVPIPV DSNKGNELEALKRVD ARDELS+VEVQMQSEAAQSFERLRNAR+EA 
Sbjct: 298 MWVVGFSVPIPVLDSNKGNELEALKRVDIARDELSIVEVQMQSEAAQSFERLRNAREEAV 357

Query: 61  ALRGEIVPGAQSAYQAARTGFELGKFGYLDVLDAQRTFFQAKAQYWKAL 109
           ALR EIVPGAQSAYQAARTGFELGKF YLDVLDAQRT+FQAKAQYWKAL
Sbjct: 358 ALRNEIVPGAQSAYQAARTGFELGKFAYLDVLDAQRTYFQAKAQYWKAL 406


>ref|YP_003846723.1| outer membrane efflux protein [Gallionella capsiferriformans ES-2]
 gb|ADL54959.1| outer membrane efflux protein [Gallionella capsiferriformans ES-2]
          Length = 436

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/107 (63%), Positives = 88/107 (82%)

Query: 3   VVGISVPIPVFDSNKGNELEALKRVDKARDELSVVEVQMQSEAAQSFERLRNARDEAAAL 62
           +VG+S+PIP+FD N+GN LEAL+R DK+RDELSV E+++ +E AQ+ ERL  AR E  +L
Sbjct: 302 IVGVSIPIPMFDRNQGNLLEALRRTDKSRDELSVTEIRLSNELAQTHERLNTARQEVRSL 361

Query: 63  RGEIVPGAQSAYQAARTGFELGKFGYLDVLDAQRTFFQAKAQYWKAL 109
           + +I+PGAQSAY AA  GFELGKF +L+VLDAQRT FQAK+QY +AL
Sbjct: 362 QRDILPGAQSAYDAATKGFELGKFSFLEVLDAQRTSFQAKSQYLRAL 408


>ref|YP_001099899.1| cobalt-zinc-cadmium resistance protein CzcC [Herminiimonas
           arsenicoxydans]
 emb|CAL61774.1| Cobalt-zinc-cadmium resistance protein CzcC precursor (Cation
           efflux system protein CzcC) [Herminiimonas
           arsenicoxydans]
          Length = 435

 Score =  134 bits (338), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/124 (55%), Positives = 92/124 (74%)

Query: 3   VVGISVPIPVFDSNKGNELEALKRVDKARDELSVVEVQMQSEAAQSFERLRNARDEAAAL 62
           VVG+S+P P+FD N+GN LEAL+R DKARDEL+  E+++  E AQ++ +L+NAR E   L
Sbjct: 302 VVGLSIPFPLFDRNQGNMLEALRRTDKARDELAASEIRLDGELAQAWTQLKNARQETQVL 361

Query: 63  RGEIVPGAQSAYQAARTGFELGKFGYLDVLDAQRTFFQAKAQYWKALFXRIPCKEEPNPI 122
           + EI+PGAQSAY+AA  GFE GKF +LDVL+AQRTF QA+AQY ++LF       E + +
Sbjct: 362 QNEILPGAQSAYEAATKGFEFGKFNFLDVLEAQRTFLQARAQYLRSLFEAHRAAAEIDRL 421

Query: 123 LQFP 126
           L  P
Sbjct: 422 LGTP 425


>ref|YP_001353484.1| cobalt-zinc-cadmium outer membrane resistance protein
           [Janthinobacterium sp. Marseille]
 gb|ABR90234.1| cobalt-zinc-cadmium outer membrane resistance protein
           [Janthinobacterium sp. Marseille]
          Length = 424

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/124 (56%), Positives = 89/124 (71%)

Query: 3   VVGISVPIPVFDSNKGNELEALKRVDKARDELSVVEVQMQSEAAQSFERLRNARDEAAAL 62
           VVG+S+P P+FD N+GN LEAL+RVDKARDEL+  E+++  E AQ++ERL   R EA  L
Sbjct: 295 VVGLSIPFPMFDRNQGNILEALRRVDKARDELNATEIRLDGELAQAYERLNTTRIEADTL 354

Query: 63  RGEIVPGAQSAYQAARTGFELGKFGYLDVLDAQRTFFQAKAQYWKALFXRIPCKEEPNPI 122
           + +I+PGAQSAY AA TGFE GKF +LDVLDAQRT  QA++QY + L        E + I
Sbjct: 355 QRDILPGAQSAYDAATTGFEFGKFNFLDVLDAQRTLLQARSQYLRTLAEAHSAAAEIDRI 414

Query: 123 LQFP 126
           L  P
Sbjct: 415 LGAP 418


>ref|YP_001353462.1| cobalt-zinc-cadmium outer membrane resistance protein czcC
           [Janthinobacterium sp. Marseille]
 gb|ABR91594.1| cobalt-zinc-cadmium outer membrane resistance protein czcC
           [Janthinobacterium sp. Marseille]
          Length = 429

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/107 (57%), Positives = 81/107 (75%)

Query: 3   VVGISVPIPVFDSNKGNELEALKRVDKARDELSVVEVQMQSEAAQSFERLRNARDEAAAL 62
           VVG+S+P+P+FD N+GN LEAL+R DKARD+L+  EV +  E  Q+  RL  +  EA  L
Sbjct: 300 VVGLSIPLPLFDRNQGNILEALRRTDKARDDLTTTEVSLNRELGQTHGRLSTSITEAEML 359

Query: 63  RGEIVPGAQSAYQAARTGFELGKFGYLDVLDAQRTFFQAKAQYWKAL 109
           + E+VP AQ AY+A   GFELGKF +L+VLDAQRTFFQAK+QY ++L
Sbjct: 360 KSEVVPAAQRAYEATTKGFELGKFSFLEVLDAQRTFFQAKSQYLRSL 406