BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1749.p (339 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001099831.1| hypothetical protein HEAR1539 [Herminiimonas... 401 e-110 ref|YP_001099878.1| putative resolvase [Herminiimonas arsenicoxy... 393 e-107 ref|ZP_05619835.1| cointegrate resolution protein S [Enhydrobact... 392 e-107 ref|YP_001353447.1| cointegrate resolution protein S [Janthinoba... 391 e-107 ref|YP_003811596.1| cointegrate resolution protein S [gamma prot... 387 e-105 >ref|YP_001099831.1| hypothetical protein HEAR1539 [Herminiimonas arsenicoxydans] emb|CAL61704.1| Putative cointegrate resolution protein S (TnpS protein) [Herminiimonas arsenicoxydans] Length = 332 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 192/318 (60%), Positives = 242/318 (76%), Gaps = 7/318 (2%) Query: 1 MIQIDDYLRAATRDNTRKSYRAAVNHFEIEWGGFLPATADSILRYLAAYAGVLAHNTLKQ 60 M +ID Y+ AATR NTR+SY++A++H+E+EW G+LPATA+S+ RYLA YA LA NTL+ Sbjct: 1 MDKIDQYIHAATRQNTRRSYQSAIHHYEVEWRGYLPATAESVARYLADYAETLAINTLRH 60 Query: 61 RISALGQWHVDQGFPDPTKVPVVRKMLRGIQELHPAQEKRAKPLQLEALEQTCTWLEQQC 120 R++ALGQWH+DQGFPDPTK P+VRK+ RGIQ+LHP QEKRAKPLQLE LEQ TWL+ Sbjct: 61 RLAALGQWHIDQGFPDPTKAPIVRKVFRGIQQLHPVQEKRAKPLQLEQLEQVTTWLDGAI 120 Query: 121 EQARQQGHFGDLLRLTRDKALLLIGFWRGFRSDELARLEIDRIEAVAGEGMTIYLPRTKT 180 A + LR TRDKAL+LIGFWRGFR DELARLE+ + A+ GEGMT YLP+TK Sbjct: 121 VAAGAEHDSAAQLRHTRDKALVLIGFWRGFRGDELARLEVQYVAALPGEGMTCYLPQTKG 180 Query: 181 DRSLKGTTYKTGKCLPMPALSRLCPVAAYLDWLAISGLKSGGVIRGIDRWGTISEGAVNA 240 DR KG+T+K PALSRLCPVAAY W+ +SGL+SG V R I+RWG + + +N Sbjct: 181 DRQFKGSTFKA------PALSRLCPVAAYQAWVDLSGLESGAVFRSINRWGKLGDTGLNP 234 Query: 241 ASIIPLFRRILKAAGVTDVHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNVSSASRY 300 ASIIPL R + AG+ D YS+HSLRRGFA+WA++NGW+++ LMEYVGWKN+ SA RY Sbjct: 235 ASIIPLLRSLFAQAGILDADEYSAHSLRRGFANWATSNGWDLKTLMEYVGWKNIQSAMRY 294 Query: 301 VDSPDPYHREMLER-LLP 317 +D DP+ ++ +E LLP Sbjct: 295 IDGADPFGKKRIEAGLLP 312 >ref|YP_001099878.1| putative resolvase [Herminiimonas arsenicoxydans] emb|CAL61751.1| putative cointegrate resolution protein S (TnpS protein) [Herminiimonas arsenicoxydans] Length = 322 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 188/330 (56%), Positives = 238/330 (72%), Gaps = 8/330 (2%) Query: 1 MIQIDDYLRAATRDNTRKSYRAAVNHFEIEWGGFLPATADSILRYLAAYAGVLAHNTLKQ 60 M +D Y+ AATRDNTR+SY++AV HFE+EWGGFLPATADS+ RYL +A L+ NTLKQ Sbjct: 1 MTTLDTYIHAATRDNTRRSYQSAVRHFEVEWGGFLPATADSLARYLVDHAKSLSINTLKQ 60 Query: 61 RISALGQWHVDQGFPDPTKVPVVRKMLRGIQELHPAQEKRAKPLQLEALEQTCTWLEQQC 120 R++AL QWH+DQGFPDPTK PVVRK+LRGIQ LHPAQEKRA+PLQ+E LEQ L+Q Sbjct: 61 RLAALAQWHIDQGFPDPTKAPVVRKVLRGIQALHPAQEKRARPLQIEQLEQVTQSLDQTI 120 Query: 121 EQARQQGHFGDLLRLTRDKALLLIGFWRGFRSDELARLEIDRIEAVAGEGMTIYLPRTKT 180 + GH LR TRDKALLL+GFWRGFR DEL L++ I+ V GEGMT +LP+TK Sbjct: 121 AASVHAGHRPAQLRHTRDKALLLLGFWRGFRGDELTNLQVQYIKVVPGEGMTCFLPQTKG 180 Query: 181 DRSLKGTTYKTGKCLPMPALSRLCPVAAYLDWLAISGLKSGGVIRGIDRWGTISEGAVNA 240 DR GTT+K P L++LCPV AYLDW++++G+ G V RG+DRWG + E ++ Sbjct: 181 DRLGHGTTFKA------PELAKLCPVTAYLDWISLAGITEGAVFRGVDRWGHVGESGLHI 234 Query: 241 ASIIPLFRRILKAAGVTDVHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNVSSASRY 300 S++PL R + AG+ YS HSLRRGFA+WA++N W+++ LMEYVGWKNV SA RY Sbjct: 235 NSLVPLLRSLFAGAGIAFAEQYSGHSLRRGFANWATSNDWDIKTLMEYVGWKNVQSAMRY 294 Query: 301 VDSPDPYHREMLERLLPKTPPALNQPSSTR 330 VD DP+ ++ + R L P L P + R Sbjct: 295 VDGADPFGKDRIGRALSTVTPQL--PDTER 322 >ref|ZP_05619835.1| cointegrate resolution protein S [Enhydrobacter aerosaccus SK60] gb|EEV23037.1| cointegrate resolution protein S [Enhydrobacter aerosaccus SK60] Length = 320 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 179/325 (55%), Positives = 238/325 (73%), Gaps = 6/325 (1%) Query: 1 MIQIDDYLRAATRDNTRKSYRAAVNHFEIEWGGFLPATADSILRYLAAYAGVLAHNTLKQ 60 M ++D Y+ AATRDNTR+SY++A+ HFE EWGGFLPATAD + RYL + G+L+ NTL+Q Sbjct: 1 MTKLDQYVHAATRDNTRRSYQSAIRHFETEWGGFLPATADGVARYLVDHVGLLSINTLRQ 60 Query: 61 RISALGQWHVDQGFPDPTKVPVVRKMLRGIQELHPAQEKRAKPLQLEALEQTCTWLEQQC 120 R++AL QWH+DQGFPDPTK P+VRK+ RGIQ LHPAQEKRAKP Q+E L WL+Q Sbjct: 61 RLAALAQWHLDQGFPDPTKAPIVRKVFRGIQTLHPAQEKRAKPFQIEQLRLVINWLDQSI 120 Query: 121 EQARQQGHFGDLLRLTRDKALLLIGFWRGFRSDELARLEIDRIEAVAGEGMTIYLPRTKT 180 E AR GD+LR TR+K++LL+GFWRGFR DEL RL ++ +E V EGM + P+TK Sbjct: 121 ESARLTDSHGDVLRHTRNKSMLLLGFWRGFRGDELTRLHVEHVEIVPNEGMICFFPQTKG 180 Query: 181 DRSLKGTTYKTGKCLPMPALSRLCPVAAYLDWLAISGLKSGGVIRGIDRWGTISEGAVNA 240 DR LKGT +K PALS+LCPV AY DW+ +SGL SG V R +++WG I + ++ Sbjct: 181 DRQLKGTRFKA------PALSQLCPVTAYTDWIEVSGLTSGAVFRSVNQWGHIGQNRLHE 234 Query: 241 ASIIPLFRRILKAAGVTDVHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNVSSASRY 300 S+IPL R + A + LYS+HSLRRGFA+WA++NGW+++ LMEYVGWKN++SA RY Sbjct: 235 DSLIPLLRSLFTEAKIDSPMLYSAHSLRRGFANWATSNGWDLKMLMEYVGWKNINSAMRY 294 Query: 301 VDSPDPYHREMLERLLPKTPPALNQ 325 ++S DP+ + +E +L + + Q Sbjct: 295 LESVDPFAQHRIESMLTPSEQLVTQ 319 >ref|YP_001353447.1| cointegrate resolution protein S [Janthinobacterium sp. Marseille] gb|ABR91740.1| cointegrate resolution protein S [Janthinobacterium sp. Marseille] Length = 324 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 189/316 (59%), Positives = 235/316 (74%), Gaps = 6/316 (1%) Query: 1 MIQIDDYLRAATRDNTRKSYRAAVNHFEIEWGGFLPATADSILRYLAAYAGVLAHNTLKQ 60 M +D Y+ AATRDNTR+SYR+A+ HFEIEWGGFLPAT DSI RYL A+A LA NTL+ Sbjct: 1 MTTLDHYIHAATRDNTRESYRSAIRHFEIEWGGFLPATTDSIARYLVAHAETLAVNTLRH 60 Query: 61 RISALGQWHVDQGFPDPTKVPVVRKMLRGIQELHPAQEKRAKPLQLEALEQTCTWLEQQC 120 R++AL QWH+DQGFPDPTK PVVR++LRGIQ LHPA EKRAKPLQLE LEQ WL+ Sbjct: 61 RLAALAQWHIDQGFPDPTKAPVVRQVLRGIQALHPAVEKRAKPLQLEHLEQVVQWLDATT 120 Query: 121 EQARQQGHFGDLLRLTRDKALLLIGFWRGFRSDELARLEIDRIEAVAGEGMTIYLPRTKT 180 AR LR R+KA+LL+GFWRGFR DEL RL+I+ +E V GEGMT Y P+TK Sbjct: 121 SAARSASDRAAELRHARNKAILLLGFWRGFRGDELTRLQIEHVEVVPGEGMTCYFPQTKG 180 Query: 181 DRSLKGTTYKTGKCLPMPALSRLCPVAAYLDWLAISGLKSGGVIRGIDRWGTISEGAVNA 240 DR+ +GT++K PALSRLCPV AYL+W+A+S L+ G R ++RWG + E ++ Sbjct: 181 DRTYQGTSFKA------PALSRLCPVDAYLEWMAVSHLREGPAFRAVNRWGHLGETGMHT 234 Query: 241 ASIIPLFRRILKAAGVTDVHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNVSSASRY 300 S+ PL R +L AG+ LYSSHSLRRGFA+WA++NGW+++ LMEYVGWKNV SA RY Sbjct: 235 DSLAPLLRTMLAEAGIASAELYSSHSLRRGFANWATSNGWDLKTLMEYVGWKNVQSAMRY 294 Query: 301 VDSPDPYHREMLERLL 316 VDS DP+ + +ER + Sbjct: 295 VDSADPFAKHRIERAI 310 >ref|YP_003811596.1| cointegrate resolution protein S [gamma proteobacterium HdN1] emb|CBL45953.1| cointegrate resolution protein S [gamma proteobacterium HdN1] Length = 345 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 188/324 (58%), Positives = 238/324 (73%), Gaps = 6/324 (1%) Query: 4 IDDYLRAATRDNTRKSYRAAVNHFEIEWGGFLPATADSILRYLAAYAGVLAHNTLKQRIS 63 +D YL+AATRDNT++SY+ A+ HFE+ WGGFLPATADSI RYLA +A LA NTLKQR++ Sbjct: 26 LDRYLQAATRDNTQRSYQTAIEHFEVSWGGFLPATADSIARYLADHADTLALNTLKQRLA 85 Query: 64 ALGQWHVDQGFPDPTKVPVVRKMLRGIQELHPAQEKRAKPLQLEALEQTCTWLEQQCEQA 123 AL QWH DQGFPDPTK P+V+K+L+GI+ELHP QEKRA+PLQL+ + Q W+E A Sbjct: 86 ALAQWHNDQGFPDPTKAPIVKKVLKGIRELHPVQEKRARPLQLDQMTQLIRWIEASLAIA 145 Query: 124 RQQGHFGDLLRLTRDKALLLIGFWRGFRSDELARLEIDRIEAVAGEGMTIYLPRTKTDRS 183 G G L R++AL+L+GFWRGFRSDEL+RL ++ I + GEGMTIYLPRTK DR Sbjct: 146 ESTGDKGAQLTHARNRALVLVGFWRGFRSDELSRLNVENIHVIPGEGMTIYLPRTKGDRL 205 Query: 184 LKGTTYKTGKCLPMPALSRLCPVAAYLDWLAISGLKSGGVIRGIDRWGTISEGAVNAASI 243 +G TYK P L RLCPV AY DW+A++GLK G V R I+RWG +++ +N SI Sbjct: 206 NRGATYKA------PVLRRLCPVGAYQDWIALAGLKGGPVFRRINRWGQLADAPLNPNSI 259 Query: 244 IPLFRRILKAAGVTDVHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNVSSASRYVDS 303 I L RR+ AAG+ + YSSHSLRRGFA+WA+AN W+++ALMEYVGWK++ SA RY+DS Sbjct: 260 IALLRRLFAAAGLAEPERYSSHSLRRGFATWANANQWDVKALMEYVGWKDIKSAIRYIDS 319 Query: 304 PDPYHREMLERLLPKTPPALNQPS 327 DPY + ++ L P L PS Sbjct: 320 ADPYGQYRIDSALGIPPKTLTSPS 343