BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1732.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_585143.1| putative major facilitator superfamily permese ... 323 1e-86 ref|YP_002231618.1| hypothetical protein BCAL2493 [Burkholderia ... 319 3e-85 ref|ZP_08273415.1| integral membrane protein (Rhomboid family) [... 318 4e-85 ref|ZP_03268708.1| protein of unknown function DUF347 [Burkholde... 316 2e-84 ref|YP_285507.1| hypothetical protein Daro_2301 [Dechloromonas a... 311 6e-83 >ref|YP_585143.1| putative major facilitator superfamily permese [Cupriavidus metallidurans CH34] ref|YP_586173.1| permease MFS [Cupriavidus metallidurans CH34] ref|YP_587112.1| permease MFS [Cupriavidus metallidurans CH34] ref|YP_001109882.1| hypothetical protein Bcep1808_7221 [Burkholderia vietnamiensis G4] ref|ZP_04763694.1| protein of unknown function DUF347 [Acidovorax delafieldii 2AN] gb|ABF09874.1| putative permease MFS (Tn6048) [Cupriavidus metallidurans CH34] gb|ABF10904.1| putative permease MFS (Tn6048) [Cupriavidus metallidurans CH34] gb|ABF11843.1| putative permease MFS (Tn6048) [Cupriavidus metallidurans CH34] gb|ABO60101.1| protein of unknown function DUF347 [Burkholderia vietnamiensis G4] gb|EER59505.1| protein of unknown function DUF347 [Acidovorax delafieldii 2AN] gb|ACT97189.1| MmfC2 [Synthetic plasmid pMOL98] Length = 260 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 184/244 (75%), Positives = 207/244 (84%) Query: 13 MNKVPEIGLSFWIIKIMSTTVGETGADFLAFNVGWGQAITSAIMATILAIILFAQLKTRR 72 +NKVPE+ LSFWIIKIMSTTVGETGADFLA N GWGQ +T +MA +LA LF QL+TRR Sbjct: 13 LNKVPEVALSFWIIKIMSTTVGETGADFLAVNAGWGQGVTRTVMAALLAAALFMQLRTRR 72 Query: 73 HIPWLYWMSVILVSIVGTQITDLMTDSLGISLYISTGIFSVLLALIFFVWYRVEHSLSIH 132 + PW+YW++V+LVS+VGTQITDL+TD LG+SLYIST F+V LA IFFVWYR+E +LSIH Sbjct: 73 YTPWIYWLTVVLVSVVGTQITDLLTDGLGVSLYISTSAFAVALAAIFFVWYRIERTLSIH 132 Query: 133 HIVSRRRELFYWAAILCTFALGTAAGDLATEALGLGFAWGAMTFGTLIAITYLAWRRGGN 192 IV+R RELFYWAAILCTFALGTAAGDLATEALGLGF WGA+ FG LI ITY AWR GGN Sbjct: 133 DIVTRSRELFYWAAILCTFALGTAAGDLATEALGLGFTWGAVAFGVLIGITYTAWRMGGN 192 Query: 193 AVSSFWIGYILTRPFGAALGDLLTQNKADGGLGMGTMWISALFLAVIIMLVAAAQVGTCR 252 AV +FWI YILTRPFGAALGDLLTQ K GGLGMG MW SALFL VI+MLVA AQ+G Sbjct: 193 AVLTFWIAYILTRPFGAALGDLLTQAKTYGGLGMGAMWTSALFLTVIVMLVAVAQIGMNG 252 Query: 253 QRSA 256 +RSA Sbjct: 253 RRSA 256 >ref|YP_002231618.1| hypothetical protein BCAL2493 [Burkholderia cenocepacia J2315] emb|CAR52798.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 260 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 184/244 (75%), Positives = 206/244 (84%) Query: 13 MNKVPEIGLSFWIIKIMSTTVGETGADFLAFNVGWGQAITSAIMATILAIILFAQLKTRR 72 +NKVPE+ LSFWIIKIMSTTVGETGADFLA N G+GQ +T +M +LA+ LF QL+TRR Sbjct: 13 LNKVPEVTLSFWIIKIMSTTVGETGADFLAVNAGFGQGLTRTVMGALLAVALFTQLRTRR 72 Query: 73 HIPWLYWMSVILVSIVGTQITDLMTDSLGISLYISTGIFSVLLALIFFVWYRVEHSLSIH 132 + PW+YW+SV+LVS+VGTQITDL+TD LG+SLYIST F+V LA IFFVWYRVE +LSIH Sbjct: 73 YTPWIYWLSVVLVSVVGTQITDLLTDGLGVSLYISTSAFAVALAAIFFVWYRVERTLSIH 132 Query: 133 HIVSRRRELFYWAAILCTFALGTAAGDLATEALGLGFAWGAMTFGTLIAITYLAWRRGGN 192 IV RRRELFYW+AILCTFALGTAAGDLATEALGLGF WGA+ FG LI ITY AWR GGN Sbjct: 133 DIVKRRRELFYWSAILCTFALGTAAGDLATEALGLGFTWGAVAFGALIGITYAAWRMGGN 192 Query: 193 AVSSFWIGYILTRPFGAALGDLLTQNKADGGLGMGTMWISALFLAVIIMLVAAAQVGTCR 252 AV +FWIGYILTRPFGAALGDLLTQ K GGLGMG MW SALFL+VI+MLVA AQ Sbjct: 193 AVLTFWIGYILTRPFGAALGDLLTQAKTYGGLGMGAMWTSALFLSVIVMLVAVAQFSMNA 252 Query: 253 QRSA 256 RSA Sbjct: 253 GRSA 256 >ref|ZP_08273415.1| integral membrane protein (Rhomboid family) [Oxalobacteraceae bacterium IMCC9480] gb|EGF33110.1| integral membrane protein (Rhomboid family) [Oxalobacteraceae bacterium IMCC9480] Length = 263 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 177/243 (72%), Positives = 208/243 (85%) Query: 13 MNKVPEIGLSFWIIKIMSTTVGETGADFLAFNVGWGQAITSAIMATILAIILFAQLKTRR 72 +NKVP++ L+FW+IKI+STTVGETGAD+LA + G G +T +MA +LAI LF QL+TRR Sbjct: 16 LNKVPQVTLAFWVIKILSTTVGETGADYLAVDAGLGHGVTRVMMAVLLAIALFNQLRTRR 75 Query: 73 HIPWLYWMSVILVSIVGTQITDLMTDSLGISLYISTGIFSVLLALIFFVWYRVEHSLSIH 132 + PW YW++V+LVSIVGTQITDL+TD LG+SL +ST F+VLLA I+ W+RVE SLS+H Sbjct: 76 YTPWAYWLTVVLVSIVGTQITDLLTDGLGVSLTVSTCAFAVLLAAIYATWFRVERSLSMH 135 Query: 133 HIVSRRRELFYWAAILCTFALGTAAGDLATEALGLGFAWGAMTFGTLIAITYLAWRRGGN 192 IVSRRRELFYW AILCTFALGTAAGDLATEA+GLGFAWG ++FGTLI ITY AWR GGN Sbjct: 136 DIVSRRRELFYWLAILCTFALGTAAGDLATEAVGLGFAWGVVSFGTLILITYAAWRLGGN 195 Query: 193 AVSSFWIGYILTRPFGAALGDLLTQNKADGGLGMGTMWISALFLAVIIMLVAAAQVGTCR 252 AV +FWIGYILTRPFGAALGDLLTQ ++DGGLGMGTMW SALFL+VI+MLVA AQVG Sbjct: 196 AVLTFWIGYILTRPFGAALGDLLTQARSDGGLGMGTMWTSALFLSVIVMLVALAQVGAGS 255 Query: 253 QRS 255 RS Sbjct: 256 SRS 258 >ref|ZP_03268708.1| protein of unknown function DUF347 [Burkholderia sp. H160] gb|EDZ99703.1| protein of unknown function DUF347 [Burkholderia sp. H160] Length = 260 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 182/244 (74%), Positives = 204/244 (83%) Query: 13 MNKVPEIGLSFWIIKIMSTTVGETGADFLAFNVGWGQAITSAIMATILAIILFAQLKTRR 72 +NKVPE+ LSFWIIKIMSTTVGETGADFLA N G GQ +T A MA +LA LF QL+TRR Sbjct: 13 LNKVPEVTLSFWIIKIMSTTVGETGADFLAVNAGLGQGVTRAGMAALLAAALFTQLRTRR 72 Query: 73 HIPWLYWMSVILVSIVGTQITDLMTDSLGISLYISTGIFSVLLALIFFVWYRVEHSLSIH 132 PW+YW++V+LVS+VGTQITDL+TD LG+SLY+ST +F+V LA IFFVWYRVE +LSIH Sbjct: 73 FTPWIYWLTVVLVSVVGTQITDLLTDGLGVSLYVSTAVFAVALAAIFFVWYRVERTLSIH 132 Query: 133 HIVSRRRELFYWAAILCTFALGTAAGDLATEALGLGFAWGAMTFGTLIAITYLAWRRGGN 192 IV+R ELFYWAAILCTFALGTAAGDLATEALGLGFAWGA+ FG LI ITY AWR GGN Sbjct: 133 DIVTRSCELFYWAAILCTFALGTAAGDLATEALGLGFAWGALAFGALIGITYAAWRMGGN 192 Query: 193 AVSSFWIGYILTRPFGAALGDLLTQNKADGGLGMGTMWISALFLAVIIMLVAAAQVGTCR 252 AV +FWIGYILTRPFGAALGDLLTQ + GGLGMG MW SA FL VI+ LVA AQ+G Sbjct: 193 AVLTFWIGYILTRPFGAALGDLLTQARTYGGLGMGAMWTSASFLLVIVTLVAVAQIGMNA 252 Query: 253 QRSA 256 RSA Sbjct: 253 NRSA 256 >ref|YP_285507.1| hypothetical protein Daro_2301 [Dechloromonas aromatica RCB] gb|AAZ47037.1| Protein of unknown function DUF347 [Dechloromonas aromatica RCB] Length = 260 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 174/244 (71%), Positives = 206/244 (84%) Query: 13 MNKVPEIGLSFWIIKIMSTTVGETGADFLAFNVGWGQAITSAIMATILAIILFAQLKTRR 72 +NKVPE+ LSFW+IKIMSTTVGETGADFLA N G+GQ +T +M +LA+ LF QL+TRR Sbjct: 13 LNKVPEVTLSFWVIKIMSTTVGETGADFLAVNAGFGQGMTRTVMGALLAVALFMQLRTRR 72 Query: 73 HIPWLYWMSVILVSIVGTQITDLMTDSLGISLYISTGIFSVLLALIFFVWYRVEHSLSIH 132 + PW+YW++V+LVS+VGTQITDL+TD LG+SLY+ST F++ LA IF VW+ VE SLSIH Sbjct: 73 YTPWIYWLTVVLVSVVGTQITDLLTDGLGVSLYVSTSAFALALAGIFAVWFWVERSLSIH 132 Query: 133 HIVSRRRELFYWAAILCTFALGTAAGDLATEALGLGFAWGAMTFGTLIAITYLAWRRGGN 192 I +RRRELFYW+AILCTFALGTAAGDLATEALGLGF WGA++FGTLIA+T+ A+R GGN Sbjct: 133 EIFTRRRELFYWSAILCTFALGTAAGDLATEALGLGFTWGAVSFGTLIALTFAAFRLGGN 192 Query: 193 AVSSFWIGYILTRPFGAALGDLLTQNKADGGLGMGTMWISALFLAVIIMLVAAAQVGTCR 252 AV +FWI YILTRPFGAALGDLLTQ K GGLGMG MW SALFL VI+MLVA AQ R Sbjct: 193 AVLTFWISYILTRPFGAALGDLLTQAKTYGGLGMGAMWTSALFLTVIVMLVAVAQFSVGR 252 Query: 253 QRSA 256 + +A Sbjct: 253 RMNA 256