BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1731.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001900071.1| hypothetical protein Rpic_2507 [Ralstonia pi... 317 1e-84 ref|ZP_07676371.1| membrane protein [Ralstonia sp. 5_7_47FAA] >g... 317 1e-84 ref|YP_002982062.1| hypothetical protein Rpic12D_2113 [Ralstonia... 312 3e-83 ref|YP_004752727.1| integral membrane protein [Collimonas fungiv... 305 3e-81 ref|ZP_03268710.1| protein of unknown function DUF347 [Burkholde... 304 8e-81 >ref|YP_001900071.1| hypothetical protein Rpic_2507 [Ralstonia pickettii 12J] gb|ACD27639.1| protein of unknown function DUF347 [Ralstonia pickettii 12J] Length = 252 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 201/252 (79%), Positives = 224/252 (88%) Query: 1 MKTYSENVLAKVPEVTLGFWLIKIAATTLGETGGDAASMSMNLGYLTSTGIFAAFFVIAV 60 MKT +E+ LAKVPEVTL FWL+KIAATTLGETGGDA SMSMNLGYL TGIFAA F+++V Sbjct: 1 MKTSTEHALAKVPEVTLAFWLLKIAATTLGETGGDAVSMSMNLGYLVGTGIFAAVFLVSV 60 Query: 61 AYQIKSKNFHPLIYWITIIATTTVGTTLADFSDRSLGIGYTGGTTLLSALLLASLLLWKR 120 A QIK+K FHPL+YW TIIATTTVGTTLADF+DRSLGIGY GG+TLL ALLL SL W R Sbjct: 61 AAQIKAKGFHPLLYWTTIIATTTVGTTLADFADRSLGIGYAGGSTLLLALLLGSLFAWYR 120 Query: 121 TLGSVSVNTVSSPRAEMFYWITIMFSQTLGTALGDWTADSAGMGYTGAAAIFGGLLALLV 180 TLGSVSV+TV SPRAE FYW+TIMFSQTLGTALGDWTAD+AG+GYTGAA +FG LLAL++ Sbjct: 121 TLGSVSVSTVHSPRAEAFYWVTIMFSQTLGTALGDWTADTAGLGYTGAAVVFGALLALII 180 Query: 181 LAYYGTKISRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYGASIALLAFMLCAM 240 +AYY T++SRTLLFWAAFILTRPLGAVVGDFLDKP SAGGLALSRY AS ALLAF+L M Sbjct: 181 VAYYWTRVSRTLLFWAAFILTRPLGAVVGDFLDKPHSAGGLALSRYSASAALLAFILTGM 240 Query: 241 LVFRQRAATASH 252 L+FRQRAA +H Sbjct: 241 LLFRQRAARVAH 252 >ref|ZP_07676371.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|EFP65275.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 253 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 201/252 (79%), Positives = 224/252 (88%) Query: 1 MKTYSENVLAKVPEVTLGFWLIKIAATTLGETGGDAASMSMNLGYLTSTGIFAAFFVIAV 60 MKT +E+ LAKVPEVTL FWL+KIAATTLGETGGDA SMSMNLGYL TGIFAA F+++V Sbjct: 2 MKTSTEHALAKVPEVTLAFWLLKIAATTLGETGGDAVSMSMNLGYLVGTGIFAAVFLVSV 61 Query: 61 AYQIKSKNFHPLIYWITIIATTTVGTTLADFSDRSLGIGYTGGTTLLSALLLASLLLWKR 120 A QIK+K FHPL+YW TIIATTTVGTTLADF+DRSLGIGY GG+TLL ALLL SL W R Sbjct: 62 AAQIKAKGFHPLLYWTTIIATTTVGTTLADFADRSLGIGYAGGSTLLLALLLGSLFAWYR 121 Query: 121 TLGSVSVNTVSSPRAEMFYWITIMFSQTLGTALGDWTADSAGMGYTGAAAIFGGLLALLV 180 TLGSVSV+TV SPRAE FYW+TIMFSQTLGTALGDWTAD+AG+GYTGAA +FG LLAL++ Sbjct: 122 TLGSVSVSTVHSPRAEAFYWVTIMFSQTLGTALGDWTADTAGLGYTGAAVVFGALLALII 181 Query: 181 LAYYGTKISRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYGASIALLAFMLCAM 240 +AYY T++SRTLLFWAAFILTRPLGAVVGDFLDKP SAGGLALSRY AS ALLAF+L M Sbjct: 182 VAYYWTRVSRTLLFWAAFILTRPLGAVVGDFLDKPHSAGGLALSRYSASAALLAFILTGM 241 Query: 241 LVFRQRAATASH 252 L+FRQRAA +H Sbjct: 242 LLFRQRAARVAH 253 >ref|YP_002982062.1| hypothetical protein Rpic12D_2113 [Ralstonia pickettii 12D] gb|ACS63390.1| protein of unknown function DUF347 [Ralstonia pickettii 12D] Length = 252 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 198/252 (78%), Positives = 221/252 (87%) Query: 1 MKTYSENVLAKVPEVTLGFWLIKIAATTLGETGGDAASMSMNLGYLTSTGIFAAFFVIAV 60 MKT +E+ LAKVPEVTL FWL+KIAATTLGETGGDA SMSMNLGYL TGIFAA F+++V Sbjct: 1 MKTSTEHALAKVPEVTLAFWLLKIAATTLGETGGDAVSMSMNLGYLVGTGIFAAVFLVSV 60 Query: 61 AYQIKSKNFHPLIYWITIIATTTVGTTLADFSDRSLGIGYTGGTTLLSALLLASLLLWKR 120 A QI++K FHPL+YW TIIATTTVGTTLADF+DRSLGIGY GG+TLL LLL SL W R Sbjct: 61 AAQIRAKGFHPLLYWTTIIATTTVGTTLADFADRSLGIGYAGGSTLLLVLLLGSLFAWYR 120 Query: 121 TLGSVSVNTVSSPRAEMFYWITIMFSQTLGTALGDWTADSAGMGYTGAAAIFGGLLALLV 180 TLGSVSV+TV SP+AE FYW+TIMFSQTLGTALGDWTAD+AG+GYTGAA +FG LLAL++ Sbjct: 121 TLGSVSVSTVHSPKAEAFYWVTIMFSQTLGTALGDWTADTAGLGYTGAAVVFGALLALII 180 Query: 181 LAYYGTKISRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYGASIALLAFMLCAM 240 AYY T+ SRTLLFWAAFILTRPLGAVVGDFLDKP SAGGLALSRY AS ALLAF+L M Sbjct: 181 AAYYWTRASRTLLFWAAFILTRPLGAVVGDFLDKPHSAGGLALSRYSASAALLAFILTGM 240 Query: 241 LVFRQRAATASH 252 L+FRQRAA +H Sbjct: 241 LLFRQRAARVAH 252 >ref|YP_004752727.1| integral membrane protein [Collimonas fungivorans Ter331] gb|AEK61904.1| integral membrane protein [Collimonas fungivorans Ter331] Length = 252 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 195/252 (77%), Positives = 221/252 (87%) Query: 1 MKTYSENVLAKVPEVTLGFWLIKIAATTLGETGGDAASMSMNLGYLTSTGIFAAFFVIAV 60 M E L+KVPEVTL FW+IKIAATTLGETGGDA SMSMNLGYL +T IFAA F++AV Sbjct: 1 MNQSIERGLSKVPEVTLLFWIIKIAATTLGETGGDAVSMSMNLGYLAATAIFAAIFLVAV 60 Query: 61 AYQIKSKNFHPLIYWITIIATTTVGTTLADFSDRSLGIGYTGGTTLLSALLLASLLLWKR 120 QIK+K FHP +YW TIIATTTVGTTLADF+DRSLGIGY GG+TLL LL+ASL +W R Sbjct: 61 FAQIKTKGFHPFLYWATIIATTTVGTTLADFADRSLGIGYAGGSTLLFILLMASLAVWHR 120 Query: 121 TLGSVSVNTVSSPRAEMFYWITIMFSQTLGTALGDWTADSAGMGYTGAAAIFGGLLALLV 180 TLGS+SV+TV++P+AEMFYW+TIMFSQTLGTALGDWTADSAG+GYTGAA +FG LLALLV Sbjct: 121 TLGSISVDTVNTPKAEMFYWLTIMFSQTLGTALGDWTADSAGLGYTGAALVFGTLLALLV 180 Query: 181 LAYYGTKISRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYGASIALLAFMLCAM 240 LAYY T+ISRTLLFWAAFILTRPLGAVVGDFLDKPL+AGGLALSRY AS+AL AF+L + Sbjct: 181 LAYYRTRISRTLLFWAAFILTRPLGAVVGDFLDKPLNAGGLALSRYSASLALFAFILGCI 240 Query: 241 LVFRQRAATASH 252 L FRQR A+ +H Sbjct: 241 LFFRQRPASKAH 252 >ref|ZP_03268710.1| protein of unknown function DUF347 [Burkholderia sp. H160] gb|EDZ99705.1| protein of unknown function DUF347 [Burkholderia sp. H160] Length = 252 Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 201/252 (79%), Positives = 223/252 (88%) Query: 1 MKTYSENVLAKVPEVTLGFWLIKIAATTLGETGGDAASMSMNLGYLTSTGIFAAFFVIAV 60 MKT +E+ LAKVPEVTLGFWLIKIAATTLGET GDA SMSMNLGYL TGIFAA F+ AV Sbjct: 1 MKTSTEHALAKVPEVTLGFWLIKIAATTLGETAGDAVSMSMNLGYLVGTGIFAAIFLAAV 60 Query: 61 AYQIKSKNFHPLIYWITIIATTTVGTTLADFSDRSLGIGYTGGTTLLSALLLASLLLWKR 120 Q+++K FHP +YW TIIATTTVGTTLADF+DRSLGIGY GG++LL ALLL SL +W R Sbjct: 61 IAQVRAKGFHPFLYWTTIIATTTVGTTLADFADRSLGIGYAGGSSLLLALLLGSLFVWHR 120 Query: 121 TLGSVSVNTVSSPRAEMFYWITIMFSQTLGTALGDWTADSAGMGYTGAAAIFGGLLALLV 180 TLGSVSV+TVSSP+AE FYW+TIMFSQTLGTALGDWTADSAG+GYTGAA +FGGLLAL+V Sbjct: 121 TLGSVSVSTVSSPKAEAFYWLTIMFSQTLGTALGDWTADSAGLGYTGAAVVFGGLLALIV 180 Query: 181 LAYYGTKISRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYGASIALLAFMLCAM 240 AYY T +SRTLLFWAAFILTRPLGAV+GDFLDKPLSAGGLALSRY AS ALLAFML + Sbjct: 181 AAYYWTSVSRTLLFWAAFILTRPLGAVLGDFLDKPLSAGGLALSRYSASAALLAFMLTGI 240 Query: 241 LVFRQRAATASH 252 L+FRQRAA +H Sbjct: 241 LLFRQRAARTAH 252