BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1728.p (182 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003907079.1| putative cytochrome b561 [Burkholderia sp. C... 140 9e-32 ref|YP_004228049.1| cytochrome b/b6 domain-containing protein [B... 138 4e-31 ref|ZP_02887449.1| cytochrome B561 [Burkholderia graminis C4D1M]... 137 5e-31 ref|ZP_06844925.1| cytochrome B561 [Burkholderia sp. Ch1-1] >gi|... 134 5e-30 ref|YP_552600.1| putative cytochrome B561 [Burkholderia xenovora... 134 8e-30 >ref|YP_003907079.1| putative cytochrome b561 [Burkholderia sp. CCGE1003] gb|ADN57788.1| putative cytochrome b561 [Burkholderia sp. CCGE1003] Length = 184 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 77/171 (45%), Positives = 106/171 (61%), Gaps = 4/171 (2%) Query: 9 YSPVAKFFHWITVLLIIGQCTIGWTMPDVDDLQSPEGLVSLHISVGLLVLLVMLARLVWR 68 Y VA+ FHW+ VLLI Q IGWTMPD+ P+GL++ H+ VG ++ ++ R+VWR Sbjct: 17 YDGVARLFHWLIVLLIAAQFVIGWTMPDIHKGTLPQGLIAWHLGVGAALIAAVVLRIVWR 76 Query: 69 LI-SPAPQPLHPHLTLTVAAAKLVHGGLYLLLAISPILGWMNAAERGWNLSFFGMMRLPA 127 PAP L P + + + HG LYL L + P+LGW NA+ RGW + FG++ P+ Sbjct: 77 ATHRPAPASLSPLFRIV---SHITHGLLYLALVVVPVLGWANASSRGWTVKLFGVLPYPS 133 Query: 128 IFPANSDLLATIGDWHIASVWALLALIGVHVCAALYHQIILKDGILIRMLP 178 I P S + +GD H W LLALIG+HV AL+H+ +LKD +L RMLP Sbjct: 134 ISPVGSSVGHEMGDIHGYLAWVLLALIGLHVAGALFHRFVLKDDVLQRMLP 184 >ref|YP_004228049.1| cytochrome b/b6 domain-containing protein [Burkholderia sp. CCGE1001] gb|ADX54989.1| Cytochrome b/b6 domain protein [Burkholderia sp. CCGE1001] Length = 182 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 80/171 (46%), Positives = 110/171 (64%), Gaps = 4/171 (2%) Query: 9 YSPVAKFFHWITVLLIIGQCTIGWTMPDVDDLQSPEGLVSLHISVGLLVLLVMLARLVWR 68 Y VAK HW+ VLLI Q IGWTMPD+ P+GL++ H+ VG ++ V++ R+VWR Sbjct: 15 YDGVAKLLHWLVVLLIAAQFVIGWTMPDIHKGTVPDGLIAWHLGVGAALVAVVVLRIVWR 74 Query: 69 LI-SPAPQPLHPHLTLTVAAAKLVHGGLYLLLAISPILGWMNAAERGWNLSFFGMMRLPA 127 + PAP P+ P + A + + HG LYL L I P+LGW NA+ RGW + G++ PA Sbjct: 75 VTHRPAPAPVSPFFS---AVSHITHGLLYLALVIVPVLGWANASSRGWTVKLLGVLPYPA 131 Query: 128 IFPANSDLLATIGDWHIASVWALLALIGVHVCAALYHQIILKDGILIRMLP 178 + P S + +GD H WALL LIG+HV AL+H+++LKDG+L RMLP Sbjct: 132 LSPVGSSVGHAMGDIHGILAWALLVLIGLHVAGALFHRLVLKDGVLQRMLP 182 >ref|ZP_02887449.1| cytochrome B561 [Burkholderia graminis C4D1M] gb|EDT06996.1| cytochrome B561 [Burkholderia graminis C4D1M] Length = 184 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 74/171 (43%), Positives = 104/171 (60%), Gaps = 4/171 (2%) Query: 9 YSPVAKFFHWITVLLIIGQCTIGWTMPDVDDLQSPEGLVSLHISVGLLVLLVMLARLVWR 68 Y VA+ HW+ VLLI Q IGWTMPD+ PEGL++ H+ VG ++ ++ R+VWR Sbjct: 17 YDGVARLLHWLIVLLIAAQFVIGWTMPDIHKGTLPEGLIAWHLGVGATLIAAVVLRIVWR 76 Query: 69 LI-SPAPQPLHPHLTLTVAAAKLVHGGLYLLLAISPILGWMNAAERGWNLSFFGMMRLPA 127 P+P + P + + + HG LYL L + P+LGW NA+ RGW + FG++ P+ Sbjct: 77 ATHRPSPASVSPFFRVV---SHITHGLLYLALVVVPLLGWANASSRGWTIKLFGVLPYPS 133 Query: 128 IFPANSDLLATIGDWHIASVWALLALIGVHVCAALYHQIILKDGILIRMLP 178 I P S + +GD H W LL LIG+HV AL+H+ +LKD +L RMLP Sbjct: 134 ISPTGSSVGHEMGDIHGYLAWVLLVLIGLHVAGALFHRFVLKDDVLQRMLP 184 >ref|ZP_06844925.1| cytochrome B561 [Burkholderia sp. Ch1-1] gb|EFG67455.1| cytochrome B561 [Burkholderia sp. Ch1-1] Length = 191 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 75/173 (43%), Positives = 107/173 (61%), Gaps = 4/173 (2%) Query: 9 YSPVAKFFHWITVLLIIGQCTIGWTMPDVDDLQSPEGLVSLHISVGLLVLLVMLARLVWR 68 Y VA+ HW+TVLLI Q IGWTMPD+ P GL++ H+ VG ++ VM+ R++WR Sbjct: 12 YDAVARTLHWLTVLLIAMQFVIGWTMPDIHKGTQPVGLIAWHLGVGSALIAVMVIRVIWR 71 Query: 69 LIS-PAPQPLHPHLTLTVAAAKLVHGGLYLLLAISPILGWMNAAERGWNLSFFGMMRLPA 127 L PAP L P L++ +++ H LY L + P+LGW+NA+ RGW + G++ PA Sbjct: 72 LTHWPAPDELPPLLSVV---SRITHFLLYAALVVVPLLGWVNASSRGWTVRLLGLVPYPA 128 Query: 128 IFPANSDLLATIGDWHIASVWALLALIGVHVCAALYHQIILKDGILIRMLPSS 180 + SD +GD H W L ALI +HV AA++H+ +LKD +L RMLP + Sbjct: 129 LSETGSDFGHEMGDVHGVLAWVLFALIALHVAAAVFHRFVLKDHVLQRMLPHA 181 >ref|YP_552600.1| putative cytochrome B561 [Burkholderia xenovorans LB400] gb|ABE33250.1| Putative cytochrome B561 [Burkholderia xenovorans LB400] Length = 191 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 4/181 (2%) Query: 1 MSNSIQEQYSPVAKFFHWITVLLIIGQCTIGWTMPDVDDLQSPEGLVSLHISVGLLVLLV 60 + S Y VA+ HW+TVLLI Q IGWTMPD+ P GL++ H+ VG ++ V Sbjct: 4 VQQSTHPAYDAVARTLHWLTVLLIAMQFVIGWTMPDIHKGTQPVGLIAWHLGVGSTLIAV 63 Query: 61 MLARLVWRLIS-PAPQPLHPHLTLTVAAAKLVHGGLYLLLAISPILGWMNAAERGWNLSF 119 M+ R+VWRL P P L P L++ +++ H LY L P+LGW+NA+ RGW + Sbjct: 64 MVIRVVWRLTHWPTPDELPPLLSVV---SRITHFLLYAALVAVPLLGWINASSRGWTVRL 120 Query: 120 FGMMRLPAIFPANSDLLATIGDWHIASVWALLALIGVHVCAALYHQIILKDGILIRMLPS 179 G++ PA+ SD +GD H W L ALI +HV AAL+H+ +LKD +L RMLP Sbjct: 121 LGLVPYPALSETGSDFGHEMGDVHGVLAWVLFALIALHVAAALFHRFVLKDHVLQRMLPH 180 Query: 180 S 180 + Sbjct: 181 A 181