BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1727.p         (163 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001353434.1| hypothetical protein mma_1744 [Janthinobacte...   174   3e-42
ref|YP_001101433.1| hypothetical protein HEAR3205 [Herminiimonas...   172   1e-41
ref|YP_001811479.1| hypothetical protein BamMC406_4809 [Burkhold...   117   5e-25
ref|ZP_02353890.1| hypothetical protein BoklE_00315 [Burkholderi...   113   8e-24
ref|YP_001900737.1| hypothetical protein Rpic_3183 [Ralstonia pi...   109   2e-22

>ref|YP_001353434.1| hypothetical protein mma_1744 [Janthinobacterium sp. Marseille]
 gb|ABR91915.1| Hypothetical protein mma_1744 [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/152 (55%), Positives = 110/152 (72%)

Query: 9   NVFIDTEFTDFLDPQLISIGLVAQSGEEFYAELPYEVRECSEFVKAAVLPLLGYAPHAEM 68
           NVFIDTEFTDF+DP+LIS+G+ ++ GE+FYAE+PY    CS FV+ AV+PLL   PH+  
Sbjct: 2   NVFIDTEFTDFVDPRLISLGMASEYGEDFYAEVPYPDHACSVFVREAVVPLLRKIPHSYF 61

Query: 69  TKDDLYVQVTNWLRLVRPKDKEVFICYDYQTDWDLFYDALDGRVPPWCKRRLVADRINEL 128
               L+++V  WL +VR   ++VFIC D QTDWDLF +ALD RVP WC  +LV+D I EL
Sbjct: 62  MIGSLHLEVIKWLEIVRRDKEDVFICIDSQTDWDLFSNALDNRVPSWCHCKLVSDEIVEL 121

Query: 129 LRYEFHKQHKLPEHHALNDARANCYAFREAPS 160
           + Y+F     LPEHHAL DA+AN +A+R  P+
Sbjct: 122 MLYDFFLHSGLPEHHALYDAQANRHAYRANPN 153


>ref|YP_001101433.1| hypothetical protein HEAR3205 [Herminiimonas arsenicoxydans]
 emb|CAL63312.1| Hypothetical protein HEAR3205 [Herminiimonas arsenicoxydans]
          Length = 158

 Score =  172 bits (436), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/148 (56%), Positives = 106/148 (71%)

Query: 9   NVFIDTEFTDFLDPQLISIGLVAQSGEEFYAELPYEVRECSEFVKAAVLPLLGYAPHAEM 68
           NVFIDTEFT+FLDPQLIS+G+ ++ GE+FY E+ Y    CS FV+  VLPLL   PH+  
Sbjct: 2   NVFIDTEFTNFLDPQLISLGMASEYGEDFYGEIAYPDHACSPFVREVVLPLLRKIPHSYF 61

Query: 69  TKDDLYVQVTNWLRLVRPKDKEVFICYDYQTDWDLFYDALDGRVPPWCKRRLVADRINEL 128
           T D+L++++  WL +VR    +VFIC DYQTDWDLF  ALD RVP WC  +LV   I EL
Sbjct: 62  TIDNLHLEIIKWLEIVRRNKDDVFICVDYQTDWDLFCKALDYRVPSWCHCKLVDREIVEL 121

Query: 129 LRYEFHKQHKLPEHHALNDARANCYAFR 156
           + Y+F K   LPEHHAL DA+AN +A+R
Sbjct: 122 MLYDFFKHSGLPEHHALYDAQANRHAYR 149


>ref|YP_001811479.1| hypothetical protein BamMC406_4809 [Burkholderia ambifaria MC40-6]
 gb|ACB67263.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
          Length = 154

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 4/153 (2%)

Query: 6   MPFNVFIDTEFTDFLDPQLISIGLVAQSGEEFYAELP-YEVRECSEFVKAAVLPLLGYAP 64
           M  ++F+DTEFTDFL+  LISI +VA  G EFY E   ++   CSEFV+AA+LP LG  P
Sbjct: 1   MSLHLFVDTEFTDFLNCDLISIAIVAADGREFYGERSDFDQGSCSEFVRAAILPQLGQYP 60

Query: 65  HAEMTKDDLYVQVTNWLRLVRPKDKEVFICYDYQTDWDLFYDALDGRVPP-WCKRRLVAD 123
               T+++L   + +WL     +DK   +C+DY  DW+L  D L G VP  W    L  D
Sbjct: 61  GRVFTREELRTALLSWLDQFAIEDKPRMLCFDYGGDWELLVDLL-GDVPSGWQACYLGDD 119

Query: 124 RINELLRYEFHKQHKLPEHHALNDARANCYAFR 156
            ++      + K+H    HHAL+DARANCYA R
Sbjct: 120 TLDHQQMEAYFKEHG-GWHHALHDARANCYAAR 151


>ref|ZP_02353890.1| hypothetical protein BoklE_00315 [Burkholderia oklahomensis EO147]
          Length = 182

 Score =  113 bits (283), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 75/164 (45%), Positives = 98/164 (59%), Gaps = 9/164 (5%)

Query: 1   MRKLT-MPFNVFIDTEFTDFLDPQLISIGLVAQSGEEFYAEL-PYEVRECSEFVKAAVLP 58
           MRK +     VF+DTEFTDF+D  LISI LVA+ G EFY E   ++ R CS FV  AVLP
Sbjct: 17  MRKASETTMRVFLDTEFTDFIDCDLISIALVAEDGREFYGERNDFDRRTCSPFVHEAVLP 76

Query: 59  LLGYAPHAEMTKDDLYVQVTNWLRLVRPKDKEVFICYDYQTDWDLFYDALDGRVPPWCKR 118
            LG  P    +++DL   +  WL   RP +  +F C D+  DWDL  DALDG VP   + 
Sbjct: 77  QLGQYPDRVFSREDLRSALLEWL---RPFESGIF-CVDFPGDWDLLVDALDG-VPNGWQG 131

Query: 119 RLVADRINELLRYEFHKQHKLPEHHALNDARANCYAFR-EAPSS 161
            LV D+ +++    ++KQ     HHAL+DARA  YA + E PS+
Sbjct: 132 LLVRDQADQVRLESYYKQFG-GRHHALHDARALRYAMQDETPST 174


>ref|YP_001900737.1| hypothetical protein Rpic_3183 [Ralstonia pickettii 12J]
 gb|ACD28305.1| hypothetical protein Rpic_3183 [Ralstonia pickettii 12J]
          Length = 241

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/147 (47%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 11  FIDTEFTDFLDPQLISIGLVAQSGEEFYAE-LPYEVRECSEFVKAAVLPLLGYAPHAEMT 69
           F+DTEFTDF+D QLIS+ +V + G EFY E   +E+  CSEFV+AAVLP LG  P   M 
Sbjct: 97  FVDTEFTDFIDCQLISVAIVGEDGREFYGERADFELSACSEFVRAAVLPQLGRVPGRSMP 156

Query: 70  KDDLYVQVTNWLRLVRPKDKEVFICYDYQTDWDLFYDALDGRVPPWCKRRLVADRINELL 129
              L  ++  WL  V  K K V +C+DYQ D+DL  D LD  +PP  K   V  R+ ++ 
Sbjct: 157 ASQLRDELMAWLLAVPAKPKRV-LCFDYQGDFDLVLDLLDAEIPPGWKCEHVGGRL-DME 214

Query: 130 RYEFHKQHKLPEHHALNDARANCYAFR 156
           R E + +     HHAL+DARAN +AFR
Sbjct: 215 RLETYFREHGGRHHALHDARANAFAFR 241