BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1724.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001913398.1| cointegrase [Xanthomonas oryzae pv. oryzae P... 181 3e-44 ref|YP_001099831.1| hypothetical protein HEAR1539 [Herminiimonas... 178 3e-43 ref|YP_001796033.1| putative integrase/recombinase [Cupriavidus ... 176 1e-42 ref|YP_003811596.1| cointegrate resolution protein S [gamma prot... 172 1e-41 ref|YP_001353447.1| cointegrate resolution protein S [Janthinoba... 172 2e-41 >ref|YP_001913398.1| cointegrase [Xanthomonas oryzae pv. oryzae PXO99A] gb|ACD58866.1| cointegrase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 322 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 88/150 (58%), Positives = 115/150 (76%), Gaps = 1/150 (0%) Query: 1 MRIHLPRTKTDRSLKGSTYKTPALSRLCPVAAYLDWLAVSGLSSGPVLRGIDRWGRISEE 60 M LPR+K D+ +G+TYK PALSRLCPV A +W+A +GLS GP+ RGIDRWG I++E Sbjct: 171 MTCFLPRSKGDKRAQGNTYKVPALSRLCPVTATWEWIAAAGLSEGPLFRGIDRWGHIADE 230 Query: 61 AVNAASIIPLLRRILKSAGIDDAHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNIHS 120 A++ S+IPLLRR+L AG+ DA YS HSLRRGFA WA+ANGW+++ALMEYVGW+++HS Sbjct: 231 ALHPNSLIPLLRRLLTCAGLPDAQEYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVHS 290 Query: 121 AARYVESQDPYHRAMLERLLPQQTAALGTP 150 A RY++ DP+ R +E LP T+AL P Sbjct: 291 AMRYIDGGDPFARQRIEASLP-GTSALPRP 319 >ref|YP_001099831.1| hypothetical protein HEAR1539 [Herminiimonas arsenicoxydans] emb|CAL61704.1| Putative cointegrate resolution protein S (TnpS protein) [Herminiimonas arsenicoxydans] Length = 332 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 85/142 (59%), Positives = 108/142 (76%), Gaps = 1/142 (0%) Query: 1 MRIHLPRTKTDRSLKGSTYKTPALSRLCPVAAYLDWLAVSGLSSGPVLRGIDRWGRISEE 60 M +LP+TK DR KGST+K PALSRLCPVAAY W+ +SGL SG V R I+RWG++ + Sbjct: 171 MTCYLPQTKGDRQFKGSTFKAPALSRLCPVAAYQAWVDLSGLESGAVFRSINRWGKLGDT 230 Query: 61 AVNAASIIPLLRRILKSAGIDDAHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNIHS 120 +N ASIIPLLR + AGI DA YS+HSLRRGFA+WA++NGW+++ LMEYVGWKNI S Sbjct: 231 GLNPASIIPLLRSLFAQAGILDADEYSAHSLRRGFANWATSNGWDLKTLMEYVGWKNIQS 290 Query: 121 AARYVESQDPYHRAMLER-LLP 141 A RY++ DP+ + +E LLP Sbjct: 291 AMRYIDGADPFGKKRIEAGLLP 312 >ref|YP_001796033.1| putative integrase/recombinase [Cupriavidus taiwanensis] ref|YP_001796431.1| putative Cointegrate resolution protein S / recombinase [Cupriavidus taiwanensis] emb|CAP63827.1| putative integrase/recombinase [Cupriavidus taiwanensis LMG 19424] emb|CAP64270.1| putative Cointegrate resolution protein S / recombinase [Cupriavidus taiwanensis LMG 19424] Length = 452 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 87/157 (55%), Positives = 116/157 (73%), Gaps = 2/157 (1%) Query: 1 MRIHLPRTKTDRSLKGSTYKTPALSRLCPVAAYLDWLAVSGLSSGPVLRGIDRWGRISEE 60 M I LP TKTDR+ G+T+K PALSRLCPVAAY+ WLA SGL++GPV R IDRWGRI+E Sbjct: 193 MTIFLPHTKTDRNHAGTTHKAPALSRLCPVAAYVAWLAASGLAAGPVFRRIDRWGRIAEA 252 Query: 61 AVNAASIIPLLRRILKSAGIDDAHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNIHS 120 + A+S++PLLR++ + AG+ A YSSHSLRRGFA+WA+AN W+++ LMEYVGWK++ S Sbjct: 253 GLQASSVVPLLRKLFQDAGLLQADRYSSHSLRRGFATWANANQWDLKMLMEYVGWKDVRS 312 Query: 121 AARYVESQDPYHRAMLERLL--PQQTAALGTPDQAEP 155 A RY+++ DP+ + +E L P T P + P Sbjct: 313 AMRYIDAADPFAQHRIEAALAPPPATLPSAPPPERRP 349 >ref|YP_003811596.1| cointegrate resolution protein S [gamma proteobacterium HdN1] emb|CBL45953.1| cointegrate resolution protein S [gamma proteobacterium HdN1] Length = 345 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 83/152 (54%), Positives = 111/152 (73%) Query: 1 MRIHLPRTKTDRSLKGSTYKTPALSRLCPVAAYLDWLAVSGLSSGPVLRGIDRWGRISEE 60 M I+LPRTK DR +G+TYK P L RLCPV AY DW+A++GL GPV R I+RWG++++ Sbjct: 193 MTIYLPRTKGDRLNRGATYKAPVLRRLCPVGAYQDWIALAGLKGGPVFRRINRWGQLADA 252 Query: 61 AVNAASIIPLLRRILKSAGIDDAHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNIHS 120 +N SII LLRR+ +AG+ + YSSHSLRRGFA+WA+AN W+++ALMEYVGWK+I S Sbjct: 253 PLNPNSIIALLRRLFAAAGLAEPERYSSHSLRRGFATWANANQWDVKALMEYVGWKDIKS 312 Query: 121 AARYVESQDPYHRAMLERLLPQQTAALGTPDQ 152 A RY++S DPY + ++ L L +P Q Sbjct: 313 AIRYIDSADPYGQYRIDSALGIPPKTLTSPSQ 344 >ref|YP_001353447.1| cointegrate resolution protein S [Janthinobacterium sp. Marseille] gb|ABR91740.1| cointegrate resolution protein S [Janthinobacterium sp. Marseille] Length = 324 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 78/140 (55%), Positives = 106/140 (75%) Query: 1 MRIHLPRTKTDRSLKGSTYKTPALSRLCPVAAYLDWLAVSGLSSGPVLRGIDRWGRISEE 60 M + P+TK DR+ +G+++K PALSRLCPV AYL+W+AVS L GP R ++RWG + E Sbjct: 171 MTCYFPQTKGDRTYQGTSFKAPALSRLCPVDAYLEWMAVSHLREGPAFRAVNRWGHLGET 230 Query: 61 AVNAASIIPLLRRILKSAGIDDAHLYSSHSLRRGFASWASANGWEMRALMEYVGWKNIHS 120 ++ S+ PLLR +L AGI A LYSSHSLRRGFA+WA++NGW+++ LMEYVGWKN+ S Sbjct: 231 GMHTDSLAPLLRTMLAEAGIASAELYSSHSLRRGFANWATSNGWDLKTLMEYVGWKNVQS 290 Query: 121 AARYVESQDPYHRAMLERLL 140 A RYV+S DP+ + +ER + Sbjct: 291 AMRYVDSADPFAKHRIERAI 310