BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1717.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAL62548.2| Conserved hypothetical protein; putative EAL dom... 365 3e-99 ref|YP_001100669.1| EAL domain-containing protein [Herminiimonas... 340 1e-91 ref|ZP_05636637.1| EAL domain-containing protein [Pseudomonas sy... 336 2e-90 ref|NP_790087.1| EAL domain-containing protein [Pseudomonas syri... 334 7e-90 gb|EGH24661.1| EAL domain-containing protein [Pseudomonas syring... 334 9e-90 >emb|CAL62548.2| Conserved hypothetical protein; putative EAL domain [Herminiimonas arsenicoxydans] Length = 261 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 177/263 (67%), Positives = 208/263 (79%), Gaps = 3/263 (1%) Query: 1 MIPLIPDSNASPGEDAARRSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQ 60 MIP+ P S P A C C + L +F +AYQPIV + TR++YA+EALVRGP Sbjct: 1 MIPIHP-SREEPSSSAT--GCRECKKETDLGFDFLFAYQPIVDVRTRSIYAHEALVRGPN 57 Query: 61 GEPAYTVLEQVNDSNRYRFDQACRTKAVEGAARLGMTQFLSINFLPNAVYRPEVCIQSTF 120 GE AY+VL QV D+NRY FDQACR +A+ GAA LGM + LSINFLPNAVYRPE CI+STF Sbjct: 58 GESAYSVLSQVTDANRYSFDQACRVEAIRGAAALGMKELLSINFLPNAVYRPEACIRSTF 117 Query: 121 KAARKYDFPIERIIFEVTEGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAE 180 +AAR YDFPIE+IIFEVTEGE+V DRPHLVNIFREY RFGFRTAIDDFGAGYAGL LLA+ Sbjct: 118 EAARLYDFPIEQIIFEVTEGEQVTDRPHLVNIFREYRRFGFRTAIDDFGAGYAGLGLLAD 177 Query: 181 YQPDLIKIDMDLVRNIDTDKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGID 240 YQPD+IKIDM+LVR ID+ KP+QAIV GI +IC L++ +LAEG+ET AERD L + GID Sbjct: 178 YQPDIIKIDMELVRGIDSSKPKQAIVHGIVSICAALNVRVLAEGIETSAERDFLYSAGID 237 Query: 241 LMQGYWFAKPKFQALSVLENSVW 263 LMQGY F KP FQA+ ++E S W Sbjct: 238 LMQGYLFCKPAFQAIGIIEPSSW 260 >ref|YP_001100669.1| EAL domain-containing protein [Herminiimonas arsenicoxydans] Length = 223 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 160/220 (72%), Positives = 187/220 (85%) Query: 44 LSTRAVYAYEALVRGPQGEPAYTVLEQVNDSNRYRFDQACRTKAVEGAARLGMTQFLSIN 103 + TR++YA+EALVRGP GE AY+VL QV D+NRY FDQACR +A+ GAA LGM + LSIN Sbjct: 3 VRTRSIYAHEALVRGPNGESAYSVLSQVTDANRYSFDQACRVEAIRGAAALGMKELLSIN 62 Query: 104 FLPNAVYRPEVCIQSTFKAARKYDFPIERIIFEVTEGERVDDRPHLVNIFREYSRFGFRT 163 FLPNAVYRPE CI+STF+AAR YDFPIE+IIFEVTEGE+V DRPHLVNIFREY RFGFRT Sbjct: 63 FLPNAVYRPEACIRSTFEAARLYDFPIEQIIFEVTEGEQVTDRPHLVNIFREYRRFGFRT 122 Query: 164 AIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRNIDTDKPRQAIVAGIAAICKELDIEILAE 223 AIDDFGAGYAGL LLA+YQPD+IKIDM+LVR ID+ KP+QAIV GI +IC L++ +LAE Sbjct: 123 AIDDFGAGYAGLGLLADYQPDIIKIDMELVRGIDSSKPKQAIVHGIVSICAALNVRVLAE 182 Query: 224 GVETRAERDHLAALGIDLMQGYWFAKPKFQALSVLENSVW 263 G+ET AERD L + GIDLMQGY F KP FQA+ ++E S W Sbjct: 183 GIETSAERDFLYSAGIDLMQGYLFCKPAFQAIGIIEPSSW 222 >ref|ZP_05636637.1| EAL domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] ref|ZP_06460613.1| EAL domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06479357.1| EAL domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] ref|ZP_07007373.1| EAL domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFH97256.1| EAL domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFW82602.1| EAL domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gb|EFW87324.1| EAL domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH04735.1| EAL domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] gb|EGH15455.1| EAL domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH82905.1| EAL domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gb|EGH92818.1| EAL domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 260 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 155/249 (62%), Positives = 195/249 (78%) Query: 16 AARRSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSN 75 A R+ C GC+ +LD F+YAYQPIV L ++++A+EALVRGP GE A +VL QVND N Sbjct: 10 APRKGCAGCTGSPELDFSFDYAYQPIVNLHDQSIFAHEALVRGPNGEGAMSVLSQVNDQN 69 Query: 76 RYRFDQACRTKAVEGAARLGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIF 135 RYRFDQACRT A+ GAA+LGM + LSINFLPNAVYRPE+CI+ST +AAR++DFP+ER+IF Sbjct: 70 RYRFDQACRTTAIAGAAKLGMNERLSINFLPNAVYRPELCIRSTLEAARQHDFPVERLIF 129 Query: 136 EVTEGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRN 195 E E E VD+ HL NI REY FGF TAIDDFGAGY+GL LLA++QPDLIK+DM+L+R+ Sbjct: 130 ETIESEHVDNNGHLSNILREYREFGFMTAIDDFGAGYSGLTLLADFQPDLIKLDMNLIRD 189 Query: 196 IDTDKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 I D+ RQAIV G+ +C +L I+++AEG+E ERD LA GI LMQGY FAKP F+AL Sbjct: 190 IHRDRARQAIVRGVVTMCSDLGIKLIAEGIEQVEERDFLADCGIFLMQGYLFAKPAFKAL 249 Query: 256 SVLENSVWE 264 + + VW+ Sbjct: 250 AQIAPDVWQ 258 >ref|NP_790087.1| EAL domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO53782.1| EAL domain protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EGH97961.1| EAL domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 260 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 154/249 (61%), Positives = 194/249 (77%) Query: 16 AARRSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSN 75 A ++ CEGC+ +L F+YAYQPIV L ++++A+EALVRGP GE A +VL QV D N Sbjct: 10 APKKGCEGCTGSPELGFSFDYAYQPIVNLHDQSIFAHEALVRGPNGEGAMSVLNQVTDQN 69 Query: 76 RYRFDQACRTKAVEGAARLGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIF 135 RYRFDQ CRT A+ GAA+LGMT+ LSINFLPNAVYRPE+CI+ST +AA+++DFPIER+IF Sbjct: 70 RYRFDQKCRTTAIAGAAKLGMTERLSINFLPNAVYRPELCIRSTLEAAKQHDFPIERLIF 129 Query: 136 EVTEGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRN 195 E E E VD+ HL NI REY FGF TAIDDFGAGY+GL LLA++QPDLIK+DM+LVR+ Sbjct: 130 ETIESEHVDNNNHLSNILREYREFGFMTAIDDFGAGYSGLTLLADFQPDLIKLDMNLVRD 189 Query: 196 IDTDKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 I D+ RQAIV G+ +CK+L I+++AEG+E ERD LA GI LMQGY FAKP F+AL Sbjct: 190 IHRDRARQAIVRGVVTMCKDLGIKLIAEGIEHIEERDFLADCGISLMQGYLFAKPAFKAL 249 Query: 256 SVLENSVWE 264 + + W+ Sbjct: 250 AQIAPEAWQ 258 >gb|EGH24661.1| EAL domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 260 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 154/249 (61%), Positives = 195/249 (78%) Query: 16 AARRSCEGCSDDGKLDIEFEYAYQPIVRLSTRAVYAYEALVRGPQGEPAYTVLEQVNDSN 75 A R+ C GC+ +LD F+YAYQPIV L ++++A+EALVRGP GE A +VL QVND N Sbjct: 10 APRKGCAGCTGSPELDFSFDYAYQPIVNLHDQSIFAHEALVRGPNGEGAMSVLSQVNDQN 69 Query: 76 RYRFDQACRTKAVEGAARLGMTQFLSINFLPNAVYRPEVCIQSTFKAARKYDFPIERIIF 135 RYRFDQACRT + GAA+LGM + LSINFLPNAVYRPE+CI+ST +AAR++DFP+ER+IF Sbjct: 70 RYRFDQACRTTPIAGAAKLGMNERLSINFLPNAVYRPELCIRSTLEAARQHDFPVERLIF 129 Query: 136 EVTEGERVDDRPHLVNIFREYSRFGFRTAIDDFGAGYAGLNLLAEYQPDLIKIDMDLVRN 195 E E E+VD+ HL NI REY FGF TAIDDFGAGY+GL LLA++QPDLIK+DM+L+R+ Sbjct: 130 ETIESEQVDNNGHLSNILREYREFGFMTAIDDFGAGYSGLTLLADFQPDLIKLDMNLIRD 189 Query: 196 IDTDKPRQAIVAGIAAICKELDIEILAEGVETRAERDHLAALGIDLMQGYWFAKPKFQAL 255 I D+ RQAIV G+ +C +L I+++AEG+E ERD LA GI LMQGY FAKP F+AL Sbjct: 190 IHRDRARQAIVRGVVTMCSDLGIKLIAEGIEQVEERDFLADCGIFLMQGYLFAKPAFKAL 249 Query: 256 SVLENSVWE 264 + + VW+ Sbjct: 250 AQIAPDVWQ 258