BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1707.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775711.1| nodulin 21 protein [Herbaspirillum seropedic... 304 8e-81 ref|ZP_04616372.1| Nodulin 21-like protein [Yersinia ruckeri ATC... 226 2e-57 ref|ZP_08824782.1| protein of unknown function DUF125 transmembr... 220 1e-55 ref|YP_523219.1| hypothetical protein Rfer_1963 [Rhodoferax ferr... 218 6e-55 ref|YP_001268058.1| hypothetical protein Pput_2740 [Pseudomonas ... 211 1e-52 >ref|YP_003775711.1| nodulin 21 protein [Herbaspirillum seropedicae SmR1] gb|ADJ63803.1| nodulin 21 protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 203/222 (91%), Positives = 215/222 (96%) Query: 4 SVMAKFHLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAANATHENVLLTGVAGLVA 63 ++M KFHLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAA A+H+NVLLTGVAGLVA Sbjct: 6 ALMPKFHLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAAQASHDNVLLTGVAGLVA 65 Query: 64 GAMSMATGEYVSVHSQADSEHAALSQEREELATDPEGEHRELMGIYMRRGLNQETAHQVA 123 GAMSMATGEYVSVHSQADSE AAL QE+EELATDPEGEHRELMGIYMRRGLNQETAH VA Sbjct: 66 GAMSMATGEYVSVHSQADSEKAALHQEKEELATDPEGEHRELMGIYMRRGLNQETAHLVA 125 Query: 124 TQLMAHDALDAHARDELGISETTAARPVQAAIVSALSFAVGAALPLAVVLLAPAASLLPA 183 TQLMAHDALDAHARDELGISETT+ARPVQAA+VSALSFAVGAALPL VVLLAPA +LLP+ Sbjct: 126 TQLMAHDALDAHARDELGISETTSARPVQAAVVSALSFAVGAALPLVVVLLAPANALLPS 185 Query: 184 IVIAALLSLAVLGAVAAKTGGANLWKGALRVSLWSSLAMGCT 225 IVIAALLSLA+LGAVAAKTGGA+LWKGALRVS+WSSLAMGCT Sbjct: 186 IVIAALLSLALLGAVAAKTGGASLWKGALRVSVWSSLAMGCT 227 >ref|ZP_04616372.1| Nodulin 21-like protein [Yersinia ruckeri ATCC 29473] gb|EEP99097.1| Nodulin 21-like protein [Yersinia ruckeri ATCC 29473] Length = 229 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 141/224 (62%), Positives = 179/224 (79%) Query: 10 HLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAANATHENVLLTGVAGLVAGAMSMA 69 H E H ++ I WLRAAVLGANDGIVSTASLL+GV +ANATH+++LLTG+AGLVAGAMSMA Sbjct: 2 HRERHSIEKIGWLRAAVLGANDGIVSTASLLLGVASANATHQSLLLTGIAGLVAGAMSMA 61 Query: 70 TGEYVSVHSQADSEHAALSQEREELATDPEGEHRELMGIYMRRGLNQETAHQVATQLMAH 129 TGEYVSV SQ+D+E AAL+QE+ EL D +GE+REL IY+ RGL+ A QVA +LM+H Sbjct: 62 TGEYVSVSSQSDTEKAALAQEQAELDADFQGEYRELTSIYVHRGLDVALARQVAEKLMSH 121 Query: 130 DALDAHARDELGISETTAARPVQAAIVSALSFAVGAALPLAVVLLAPAASLLPAIVIAAL 189 DAL AHARDELGIS TAARP+QAA SA+SF+ GA LPL V L+ +PA+ ++AL Sbjct: 122 DALGAHARDELGISAITAARPLQAAWTSAMSFSAGALLPLLVALIVSVDWAIPAVSLSAL 181 Query: 190 LSLAVLGAVAAKTGGANLWKGALRVSLWSSLAMGCTAAIGSFFG 233 +SLA+LG +AAKTGGA + +G +R++ WS+LAMG ++ +G FG Sbjct: 182 ISLAILGGIAAKTGGAPIRQGIIRITFWSALAMGVSSVVGMLFG 225 >ref|ZP_08824782.1| protein of unknown function DUF125 transmembrane [Thiorhodococcus drewsii AZ1] gb|EGV28604.1| protein of unknown function DUF125 transmembrane [Thiorhodococcus drewsii AZ1] Length = 233 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 153/230 (66%), Positives = 179/230 (77%) Query: 7 AKFHLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAANATHENVLLTGVAGLVAGAM 66 ++ H E H+ D I WLRAAVLGANDGIVSTASLLVGV AANA+H ++LLTGVAGLVAGAM Sbjct: 4 SRHHKERHRTDRIGWLRAAVLGANDGIVSTASLLVGVAAANASHADILLTGVAGLVAGAM 63 Query: 67 SMATGEYVSVHSQADSEHAALSQEREELATDPEGEHRELMGIYMRRGLNQETAHQVATQL 126 SMA GEYVSVHSQAD+E A L++ER EL +P E REL IY+ RGL A QVA QL Sbjct: 64 SMAAGEYVSVHSQADTEKADLARERTELEQNPPAERRELAAIYVNRGLEPNLAAQVAEQL 123 Query: 127 MAHDALDAHARDELGISETTAARPVQAAIVSALSFAVGAALPLAVVLLAPAASLLPAIVI 186 MAHDAL AHARDELGISET +ARP+QAA+ SA SFAVGAALPLAV +AP L+P + Sbjct: 124 MAHDALAAHARDELGISETLSARPIQAALASAASFAVGAALPLAVTAVAPEHILIPWVSG 183 Query: 187 AALLSLAVLGAVAAKTGGANLWKGALRVSLWSSLAMGCTAAIGSFFGAAV 236 A+L LA+LGA+AA+ GGA++ GA RV+ W +LAM TA +GS FG AV Sbjct: 184 ASLAFLALLGAIAARVGGASMLVGASRVTFWGALAMAITAGVGSVFGGAV 233 >ref|YP_523219.1| hypothetical protein Rfer_1963 [Rhodoferax ferrireducens T118] gb|ABD69688.1| protein of unknown function DUF125, transmembrane [Rhodoferax ferrireducens T118] Length = 233 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 150/227 (66%), Positives = 173/227 (76%) Query: 10 HLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAANATHENVLLTGVAGLVAGAMSMA 69 H E H+ D I WLRAAVLGANDGIVSTASL+VGV AA+A+H ++LLTGVAGLVAGAMSMA Sbjct: 7 HTERHRTDRIGWLRAAVLGANDGIVSTASLVVGVAAASASHGSILLTGVAGLVAGAMSMA 66 Query: 70 TGEYVSVHSQADSEHAALSQEREELATDPEGEHRELMGIYMRRGLNQETAHQVATQLMAH 129 GEYVSVHSQAD+E A LS+ER EL DP E REL IY+ RGL A QVA QLM H Sbjct: 67 AGEYVSVHSQADTETADLSRERAELELDPASERRELAAIYVARGLQPGLAQQVAEQLMQH 126 Query: 130 DALDAHARDELGISETTAARPVQAAIVSALSFAVGAALPLAVVLLAPAASLLPAIVIAAL 189 DAL AHARDELGIS+T +ARPVQAA+ SA SFAVG+ LPLA LAP L+ + +L Sbjct: 127 DALGAHARDELGISDTFSARPVQAALASAASFAVGSVLPLAATALAPETGLIGWVSGTSL 186 Query: 190 LSLAVLGAVAAKTGGANLWKGALRVSLWSSLAMGCTAAIGSFFGAAV 236 L LA+LGAVAA+ GGA + GA RV+ W +LAMG TA +G+ FGA V Sbjct: 187 LFLALLGAVAARVGGAGVLVGAWRVTFWGALAMGITAGVGALFGAVV 233 >ref|YP_001268058.1| hypothetical protein Pput_2740 [Pseudomonas putida F1] gb|ABQ78874.1| protein of unknown function DUF125, transmembrane [Pseudomonas putida F1] Length = 233 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 149/227 (65%), Positives = 177/227 (77%) Query: 10 HLEHHKVDAISWLRAAVLGANDGIVSTASLLVGVVAANATHENVLLTGVAGLVAGAMSMA 69 H E H+ D I WLRAAVLGANDGIVSTASLL+GV AANA+H +L+TG+AGL+AGAMSMA Sbjct: 7 HTEAHRSDRIGWLRAAVLGANDGIVSTASLLIGVAAANASHATLLVTGMAGLMAGAMSMA 66 Query: 70 TGEYVSVHSQADSEHAALSQEREELATDPEGEHRELMGIYMRRGLNQETAHQVATQLMAH 129 GEY+SVHSQAD+E A LS+ER ELA+DP+ EH EL IYM+RG+ E AHQVA QLMAH Sbjct: 67 AGEYISVHSQADTERADLSRERAELASDPKAEHAELANIYMQRGVAPELAHQVADQLMAH 126 Query: 130 DALDAHARDELGISETTAARPVQAAIVSALSFAVGAALPLAVVLLAPAASLLPAIVIAAL 189 DAL +HARDELGIS T A+P+QAA+ SA SF VGAALPLAV +AP S+ P I +L Sbjct: 127 DALGSHARDELGISATLTAKPLQAALASAASFVVGAALPLAVTFVAPEHSVGPWISGMSL 186 Query: 190 LSLAVLGAVAAKTGGANLWKGALRVSLWSSLAMGCTAAIGSFFGAAV 236 + L LGA+AAK GGA++ GA RV+ W +LAMG TA +G FGA V Sbjct: 187 VFLGALGAIAAKAGGASIMTGAWRVTFWGALAMGVTALVGHLFGAVV 233