BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1699.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775704.1| sugar kinase [Herbaspirillum seropedicae SmR... 496 e-138 ref|YP_004754743.1| ribokinase [Collimonas fungivorans Ter331] >... 294 9e-78 gb|EGH29505.1| carbohydrate kinase, PfkB [Pseudomonas syringae p... 268 1e-69 ref|YP_235236.1| carbohydrate kinase, PfkB [Pseudomonas syringae... 265 6e-69 ref|ZP_08273305.1| Ribokinase [Oxalobacteraceae bacterium IMCC94... 253 2e-65 >ref|YP_003775704.1| sugar kinase [Herbaspirillum seropedicae SmR1] gb|ADJ63796.1| sugar kinase protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 289/299 (96%), Positives = 295/299 (98%) Query: 1 MIVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLAAPGSSVAMVA 60 MIVIIGSVNMDLVLRVPRMPLPGETLAGD+FMTIPGGKGANQAVACARLAAPG+ VAMVA Sbjct: 1 MIVIIGSVNMDLVLRVPRMPLPGETLAGDRFMTIPGGKGANQAVACARLAAPGTRVAMVA 60 Query: 61 CVGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDV 120 CVGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDV Sbjct: 61 CVGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDV 120 Query: 121 ERIERARPVIEQASIVLLQLEVPMDTVIHSIELAHALGKTVVLNPAPAQALPRALLQKID 180 ERIERAR +IEQASIVLLQLEVPM TVIHSIELAHALGKTVVLNPAPAQALPRALLQKID Sbjct: 121 ERIERARALIEQASIVLLQLEVPMATVIHSIELAHALGKTVVLNPAPAQALPRALLQKID 180 Query: 181 YLILNEIEAAMLAEEQSEDIPLLAQKLHGLGARNVVVTLGEKGVYGSFADGQQRHLPARK 240 YLILNEIEAAMLAEEQSEDIP+LA+KLH LGARNVVVTLGEKGVYGSFADGQQRHLPARK Sbjct: 181 YLILNEIEAAMLAEEQSEDIPMLARKLHDLGARNVVVTLGEKGVYGSFADGQQRHLPARK 240 Query: 241 VQAVDTTAAGDTFIGGFIGAIAQGRDQFDAIAYAQAAAALSVTRVGAQTSIPTRDEVVL 299 VQAVDTTAAGDTFIGGFIGAIAQGRDQF+AIAYAQAAAALSVTRVGAQTSIPTRDEVVL Sbjct: 241 VQAVDTTAAGDTFIGGFIGAIAQGRDQFEAIAYAQAAAALSVTRVGAQTSIPTRDEVVL 299 >ref|YP_004754743.1| ribokinase [Collimonas fungivorans Ter331] gb|AEK63920.1| Ribokinase [Collimonas fungivorans Ter331] Length = 308 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 194/307 (63%), Positives = 232/307 (75%), Gaps = 11/307 (3%) Query: 1 MIVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLAAPGSSVAMVA 60 MIVIIGS+NMDLVL VPRMPLPGETL+G +F TI GGKGANQAVACARL+ VAMVA Sbjct: 1 MIVIIGSINMDLVLNVPRMPLPGETLSGGRFQTISGGKGANQAVACARLSDDSVKVAMVA 60 Query: 61 CVGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDV 120 C+GDDAFG ++R ++ GIDD +I +AGEA+G+ASI+VDA QNSIV+AAGAN L Sbjct: 61 CLGDDAFGTELRAALRNDGIDDSHISTIAGEASGVASILVDAGGQNSIVLAAGANDALSP 120 Query: 121 ERIERARPVIEQASIVLLQLEVPMDTVIHSIELAHALGKTVVLN----PAPAQALPRALL 176 I+ AR +IEQA IV+LQLE P+ TVIH+I+LAH LGKTVVLN PAPAQALP ALL Sbjct: 121 AHIDAARSLIEQARIVVLQLETPLATVIHAIKLAHQLGKTVVLNPAPAPAPAQALPAALL 180 Query: 177 QKIDYLILNEIEAAMLAE------EQSEDIPLLAQKLHGLGARNVVVTLGEKGVYGSFAD 230 ++DYLI NEIEAAMLA + I KL G+ NV+VTLGEKGVY + + Sbjct: 181 AQVDYLIPNEIEAAMLAGLSAASLDNDAAIEAAVAKLRADGSSNVLVTLGEKGVYAALSS 240 Query: 231 GQQRHLPARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFDAIAYAQAAAALSVTRVGAQTS 290 G H A++ +AVDTTAAGDTFIGGF+ A+A+GR + DAIA+ Q AAALSV R+GAQTS Sbjct: 241 GSV-HFAAQQTKAVDTTAAGDTFIGGFVAALAEGRSEADAIAFGQRAAALSVARIGAQTS 299 Query: 291 IPTRDEV 297 IP R E+ Sbjct: 300 IPYRREL 306 >gb|EGH29505.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 306 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 170/301 (56%), Positives = 213/301 (70%), Gaps = 10/301 (3%) Query: 2 IVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLAAPGSSVAMVAC 61 IVI+GS+NMDLV+R R+P PGETL+G+ F T+PGGKGANQAVA ARL G+SVAM+ C Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARL---GASVAMIGC 61 Query: 62 VGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDVE 121 VG DA+G Q+R ++ A ID + + V G +TGIASI+VDAN+QN+IVI AG NGRL Sbjct: 62 VGADAYGEQLRAALLAEQIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLSPA 121 Query: 122 RIERARPVIEQASIVLLQLEVPMDTVIHSIELAHALGKTVVLNPAPA-QALPRALLQKID 180 IER ++ + IV+ QLEVP +TV H++ A ALGKTV+LNPAPA + LP ID Sbjct: 122 LIERFDTLLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYALID 181 Query: 181 YLILNEIEAAMLAEEQSEDIPLLAQK----LHGLGARNVVVTLGEKGVYGSFADGQQRHL 236 YLI NE EA L S D P A+ + GARNV++TLGE G + A G + H+ Sbjct: 182 YLIPNESEAQTLT-GVSVDSPAAAENAASSMLAAGARNVIITLGEHGTLFANASGME-HI 239 Query: 237 PARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFDAIAYAQAAAALSVTRVGAQTSIPTRDE 296 PAR+VQAVDTTAAGDTF+GGF A++ G + AI + QAAAA+SVTR GAQ SIPT +E Sbjct: 240 PARRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTFEE 299 Query: 297 V 297 V Sbjct: 300 V 300 >ref|YP_235236.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. syringae B728a] gb|AAY37198.1| Carbohydrate kinase, PfkB [Pseudomonas syringae pv. syringae B728a] Length = 306 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 213/301 (70%), Gaps = 10/301 (3%) Query: 2 IVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLAAPGSSVAMVAC 61 IVI+GS+NMDLV+R R+P PGETL+G+ F T+PGGKGANQAVA ARL G+SVAM+ C Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARL---GASVAMIGC 61 Query: 62 VGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLDVE 121 VG DA+G Q+R ++ A ID + + V G +TGIASI+VDAN+QN+IVI AG NGRL Sbjct: 62 VGADAYGEQLRAALLAEQIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLTPA 121 Query: 122 RIERARPVIEQASIVLLQLEVPMDTVIHSIELAHALGKTVVLNPAPA-QALPRALLQKID 180 +ER ++ + IV+ QLEVP +TV H++ A ALGKTV+LNPAPA + LP + ID Sbjct: 122 LLERFDALLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPASWYALID 181 Query: 181 YLILNEIEAAMLAEEQSEDIPLLAQK----LHGLGARNVVVTLGEKGVYGSFADGQQRHL 236 YLI NE EA L + D P A+ + GARNV++TLGE G + A G H+ Sbjct: 182 YLIPNESEAQTLT-GVNVDSPAAAENAASVMLAAGARNVIITLGEHGTLFANASGMD-HI 239 Query: 237 PARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFDAIAYAQAAAALSVTRVGAQTSIPTRDE 296 PAR+VQAVDTTAAGDTF+GGF A++ G + AI + QAAAA+SVTR GAQ SIPT +E Sbjct: 240 PARRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTFEE 299 Query: 297 V 297 V Sbjct: 300 V 300 >ref|ZP_08273305.1| Ribokinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33232.1| Ribokinase [Oxalobacteraceae bacterium IMCC9480] Length = 306 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 175/297 (58%), Positives = 207/297 (69%), Gaps = 4/297 (1%) Query: 1 MIVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLAAPG-SSVAMV 59 MIV+IGS+NMDLVLRVPR+P GETL+G F TIPGGKGANQAVACARL +VAMV Sbjct: 1 MIVVIGSINMDLVLRVPRIPAAGETLSGSAFRTIPGGKGANQAVACARLGTGSLPAVAMV 60 Query: 60 ACVGDDAFGGQMRQSITACGIDDRYIDEVAGEATGIASIMVDANAQNSIVIAAGANGRLD 119 C+GDD FG +R ++ A GID + + G A+G+A+IMVDA QNSIVIA GAN L Sbjct: 61 GCLGDDGFGTLLRAALVAEGIDVSCVSTMPGIASGVATIMVDAAGQNSIVIAGGANDLLS 120 Query: 120 VERIERARPVIEQASIVLLQLEVPMDTVIHSIELAHALGKTVVLN--PAPAQALPRALLQ 177 I+ A +I QA IV+LQLE P+ TV ++I LAH LGK VVLN PAPA LP ALL Sbjct: 121 PAHIDAAHELIAQAGIVVLQLESPLATVEYAIGLAHKLGKIVVLNPAPAPATPLPVALLA 180 Query: 178 KIDYLILNEIEAAMLAEEQSEDIPLLAQKLHGLGARNVVVTLGEKGVYGSFADGQQRHLP 237 ++DYLI NEIEAAMLA +D+ + L G RNV+VTLG KGV+ + ADG Sbjct: 181 QVDYLIPNEIEAAMLAGCAPDDVAGASAALRAQGCRNVLVTLGAKGVHAALADGTLA-FA 239 Query: 238 ARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFDAIAYAQAAAALSVTRVGAQTSIPTR 294 A V AVD+TAAGDTFIGGF+ A+A G +AIA Q AAA SV R GAQTSIP R Sbjct: 240 AHPVVAVDSTAAGDTFIGGFVAALAAGEPVVEAIALGQRAAAWSVMRHGAQTSIPHR 296