BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1693.p (321 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775698.1| Na+/H+ antiporter protein [Herbaspirillum se... 479 e-133 ref|YP_523830.1| Na+/H+ antiporter NhaA [Rhodoferax ferrireducen... 342 5e-92 ref|YP_001333707.1| pH-dependent sodium/proton antiporter [Klebs... 303 3e-80 ref|ZP_07773970.1| Na+:H+ antiporter, NhaA family [Pseudomonas f... 302 4e-80 ref|YP_003441287.1| Na+/H+ antiporter NhaA [Klebsiella variicola... 302 6e-80 >ref|YP_003775698.1| Na+/H+ antiporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ63790.1| Na+/H+ antiporter protein [Herbaspirillum seropedicae SmR1] Length = 397 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 298/316 (94%), Positives = 310/316 (98%) Query: 1 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 60 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA Sbjct: 78 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 137 Query: 61 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 120 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA Sbjct: 138 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 197 Query: 121 GVGTLVLLLLNRSGVRRADIYIVVGLVIWVCVLKSGIHATLAGVVTALAIPMRDADDQPL 180 G+G+LVLLLLNRSGVRRAD+YI+VGLVIWVCVLKSGIHATLAGVVTALAIPMRDA DQPL Sbjct: 198 GLGSLVLLLLNRSGVRRADVYILVGLVIWVCVLKSGIHATLAGVVTALAIPMRDAHDQPL 257 Query: 181 AGALEHGLHPWVAFLVLPMFAFANAGVPFQGMSLGNLFEPIPLGIAAGLVLGKTIGVFGA 240 AGALEHGLHPWVAFLVLPMFAFANAGV QGMSLG+L EPIPLGIAAGLVLGKT+GVFGA Sbjct: 258 AGALEHGLHPWVAFLVLPMFAFANAGVSLQGMSLGSLLEPIPLGIAAGLVLGKTVGVFGA 317 Query: 241 AWLMIRSGLAAAPSGASTRQFIGVCMLCGIGFTMSLFIGGLAFQGLSPDFEAKLKLGVLG 300 AWLM+RSGLA AP+GA+TRQFIGVCMLCGIGFTMSLFIGGLAFQGL+ DFEAKLKLGVLG Sbjct: 318 AWLMVRSGLATAPAGATTRQFIGVCMLCGIGFTMSLFIGGLAFQGLAADFEAKLKLGVLG 377 Query: 301 GSILAGLLGTLVLWRK 316 GS++AGLLGTLVLWRK Sbjct: 378 GSVIAGLLGTLVLWRK 393 >ref|YP_523830.1| Na+/H+ antiporter NhaA [Rhodoferax ferrireducens T118] sp|Q21VA4|NHAA_RHOFD RecName: Full=Na(+)/H(+) antiporter nhaA; AltName: Full=Sodium/proton antiporter nhaA gb|ABD70299.1| Na+/H+ antiporter NhaA [Rhodoferax ferrireducens T118] Length = 393 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 213/313 (68%), Positives = 245/313 (78%) Query: 1 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 60 MAVFFFLVGLEIKRE + GELAS KQA+LPA AALGGM VPA IYA IN G+PV LRGW Sbjct: 74 MAVFFFLVGLEIKRELLNGELASLKQAMLPAVAALGGMAVPALIYAAINWGEPVGLRGWG 133 Query: 61 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 120 IP ATDIAFA+G+++LLGSRVPTSLKVFLTAVAIIDDLGAI+VIA FYTDNLS ML A Sbjct: 134 IPMATDIAFALGLLVLLGSRVPTSLKVFLTAVAIIDDLGAILVIAFFYTDNLSPTMLLAA 193 Query: 121 GVGTLVLLLLNRSGVRRADIYIVVGLVIWVCVLKSGIHATLAGVVTALAIPMRDADDQPL 180 G+G LVLL LNR+ V Y+VVGLVIWVCVLKSGIHATLAGV+TALAIP+ D Sbjct: 194 GLGALVLLGLNRARVMAVGPYVVVGLVIWVCVLKSGIHATLAGVITALAIPLADGKGGSP 253 Query: 181 AGALEHGLHPWVAFLVLPMFAFANAGVPFQGMSLGNLFEPIPLGIAAGLVLGKTIGVFGA 240 EH L PWVAFLVLP+FAFANAGV QG++L L + +PLGIA GL++GK IGVFGA Sbjct: 254 LERAEHALQPWVAFLVLPVFAFANAGVSLQGVTLATLTQTVPLGIAFGLLIGKPIGVFGA 313 Query: 241 AWLMIRSGLAAAPSGASTRQFIGVCMLCGIGFTMSLFIGGLAFQGLSPDFEAKLKLGVLG 300 +WL+IR A P QF GVC+LCG+GFTMSLFIG LAF+G +E ++K+GVL Sbjct: 314 SWLLIRLTDAQLPDQCRWSQFFGVCVLCGVGFTMSLFIGSLAFEGADAAYEVQVKIGVLL 373 Query: 301 GSILAGLLGTLVL 313 GS+L+G G +L Sbjct: 374 GSLLSGAAGVALL 386 >ref|YP_001333707.1| pH-dependent sodium/proton antiporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] sp|A6T4F6|NHAA1_KLEP7 RecName: Full=Na(+)/H(+) antiporter nhaA 1; AltName: Full=Sodium/proton antiporter nhaA 1 gb|ABR75477.1| Na+/H antiporter, pH dependent [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 395 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 180/316 (56%), Positives = 231/316 (73%) Query: 1 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 60 MAVFF L+GLE+KRE ++G LASR+QA+ P AALGGM+VPA +Y N DPVA GWA Sbjct: 72 MAVFFLLIGLEVKRELIQGSLASRRQAVFPVIAALGGMIVPALVYLAFNAQDPVAREGWA 131 Query: 61 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 120 IPAATDIAFA+G++ LLGSRVPT+LK+FL A+AIIDDLGAIV+IALFYT +LS+ L A Sbjct: 132 IPAATDIAFALGVLALLGSRVPTALKIFLMALAIIDDLGAIVIIALFYTHDLSMLSLGVA 191 Query: 121 GVGTLVLLLLNRSGVRRADIYIVVGLVIWVCVLKSGIHATLAGVVTALAIPMRDADDQPL 180 VL+ LN SGVRR IYI+VG V+W VLKSG+HATLAGV+ IP+ + + Sbjct: 192 AAAIAVLMALNLSGVRRTGIYILVGAVLWTAVLKSGVHATLAGVIVGFMIPLEEKHGKSP 251 Query: 181 AGALEHGLHPWVAFLVLPMFAFANAGVPFQGMSLGNLFEPIPLGIAAGLVLGKTIGVFGA 240 A ALEH LHPWVAF++LP+FAFANAGV QG++L L +PLGI AGL +GK +G+ Sbjct: 252 AKALEHVLHPWVAFMILPLFAFANAGVSLQGVTLAGLTSLLPLGIMAGLFIGKPLGISLF 311 Query: 241 AWLMIRSGLAAAPSGASTRQFIGVCMLCGIGFTMSLFIGGLAFQGLSPDFEAKLKLGVLG 300 WL ++ A+ P G + +Q + V +LCGIGFTMS+FI LAF + P KLG+L Sbjct: 312 CWLALKLKWASLPEGTTCKQIMAVGILCGIGFTMSIFIATLAFGSVDPALINWAKLGILI 371 Query: 301 GSILAGLLGTLVLWRK 316 GS+L+ ++G L+L ++ Sbjct: 372 GSVLSAVVGYLILRQR 387 >ref|ZP_07773970.1| Na+:H+ antiporter, NhaA family [Pseudomonas fluorescens WH6] gb|EFQ64734.1| Na+:H+ antiporter, NhaA family [Pseudomonas fluorescens WH6] Length = 391 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 187/314 (59%), Positives = 236/314 (75%), Gaps = 3/314 (0%) Query: 1 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 60 MA+FF L+GLE+KRE ++G L+ Q +LP AAA+GGMVVPA IY IN P AL GWA Sbjct: 70 MALFFLLIGLEVKRELLDGHLSKPSQVVLPGAAAIGGMVVPALIYWAINKDYPAALSGWA 129 Query: 61 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 120 IP ATDIAFA+G++ LLG RVP SLK+FL +AIIDDLGAI+VIA+FY+ +LS LAGA Sbjct: 130 IPMATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIAVFYSADLSGAALAGA 189 Query: 121 GVGTLVLLLLNRSGVRRADIYIVVGLVIWVCVLKSGIHATLAGVVTALAIPMR--DADDQ 178 G + L+ +NR GV + Y++VGLV+WVCVLKSG+HATLAGV A IPMR +A+ Sbjct: 190 GACLVALIAMNRLGVIKLWAYLIVGLVLWVCVLKSGVHATLAGVTLAFCIPMRTKNAEPS 249 Query: 179 PLAGALEHGLHPWVAFLVLPMFAFANAGVPFQGMSLGNLFEPIPLGIAAGLVLGKTIGVF 238 PL LEH LHPWVA+ +LP+FAFANAGV G+SL + +P+GIAAGL++GKTIGVF Sbjct: 250 PLL-TLEHALHPWVAYGILPLFAFANAGVSLTGVSLESFTHHVPMGIAAGLLIGKTIGVF 308 Query: 239 GAAWLMIRSGLAAAPSGASTRQFIGVCMLCGIGFTMSLFIGGLAFQGLSPDFEAKLKLGV 298 G WL I++GLAA PSGA+ Q GV +LCGIGFTMSLF+G LAF + +F + ++G+ Sbjct: 309 GLTWLAIKTGLAALPSGANWGQVFGVAILCGIGFTMSLFVGSLAFVPGASEFAGEDRMGI 368 Query: 299 LGGSILAGLLGTLV 312 L GSILA +G +V Sbjct: 369 LTGSILAACIGYVV 382 >ref|YP_003441287.1| Na+/H+ antiporter NhaA [Klebsiella variicola At-22] gb|ADC60255.1| Na+/H+ antiporter NhaA [Klebsiella variicola At-22] Length = 391 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 180/316 (56%), Positives = 232/316 (73%) Query: 1 MAVFFFLVGLEIKREFVEGELASRKQAILPAAAALGGMVVPAAIYALINLGDPVALRGWA 60 MAVFF L+GLE+KRE ++G LASR+QA+ P AALGGM+VPA +Y N DPVA GWA Sbjct: 68 MAVFFLLIGLEVKRELIQGSLASRRQAVFPVIAALGGMIVPALVYLAFNAQDPVAREGWA 127 Query: 61 IPAATDIAFAIGIVMLLGSRVPTSLKVFLTAVAIIDDLGAIVVIALFYTDNLSLGMLAGA 120 IPAATDIAFA+G++ LLGSRVPT+LK+FL A+AIIDDLGAIV+IALFYT +LS+ L+ A Sbjct: 128 IPAATDIAFALGVLALLGSRVPTALKIFLMALAIIDDLGAIVIIALFYTHDLSMLSLSVA 187 Query: 121 GVGTLVLLLLNRSGVRRADIYIVVGLVIWVCVLKSGIHATLAGVVTALAIPMRDADDQPL 180 VL+ LN SGVRR IYI+VG V+W VLKSG+HATLAGV+ IP+ + + Sbjct: 188 AAAIAVLVALNLSGVRRTGIYILVGAVLWTAVLKSGVHATLAGVIVGFMIPLEEKHGKSP 247 Query: 181 AGALEHGLHPWVAFLVLPMFAFANAGVPFQGMSLGNLFEPIPLGIAAGLVLGKTIGVFGA 240 A ALEH LHPWVAF++LP+FAFANAGV QG++L L +PLGI AGL +GK +G+ Sbjct: 248 AKALEHVLHPWVAFMILPLFAFANAGVSLQGVTLAGLTSLLPLGIMAGLFIGKPLGISLF 307 Query: 241 AWLMIRSGLAAAPSGASTRQFIGVCMLCGIGFTMSLFIGGLAFQGLSPDFEAKLKLGVLG 300 WL ++ A+ P G + +Q + V +LCGIGFTMS+FI LAF + P KLG+L Sbjct: 308 CWLALKLKWASLPEGTTCKQIMAVGILCGIGFTMSIFIATLAFGSVDPALINWAKLGILI 367 Query: 301 GSILAGLLGTLVLWRK 316 GS+L+ ++G L+L ++ Sbjct: 368 GSVLSAVIGYLILRQR 383