BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1689.p (488 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775696.1| formiminoglutamate deiminase [Herbaspirillum... 627 e-177 ref|ZP_03696659.1| formiminoglutamate deiminase [Lutiella nitrof... 496 e-138 ref|YP_004848931.1| formiminoglutamate deiminase [Pseudogulbenki... 478 e-132 ref|YP_001858037.1| N-formimino-L-glutamate deiminase [Burkholde... 477 e-132 ref|YP_003907426.1| formiminoglutamate deiminase [Burkholderia s... 473 e-131 >ref|YP_003775696.1| formiminoglutamate deiminase [Herbaspirillum seropedicae SmR1] gb|ADJ63788.1| formiminoglutamate deiminase protein [Herbaspirillum seropedicae SmR1] Length = 482 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 349/488 (71%), Positives = 386/488 (79%), Gaps = 6/488 (1%) Query: 1 MASLGEQTQQHLHAHPQPHAHALPRQSARALFCPLALLPDGWQHDVLLRWDDSGRLIEVS 60 MAS G+Q HL P+ + ALFCPLALLP GW+ DVLLRWD +GRL V+ Sbjct: 1 MASHGDQDLHHLDQAPENAC------ANGALFCPLALLPQGWRSDVLLRWDGAGRLTHVT 54 Query: 61 VRSPRGEAAQASGPVIAGMPNLHSHAFQRAMAGLTEVMGSPSDSFWSWRKLMYRFAQRLQ 120 S RG AA ASGPV+ GMPNLHSHAFQRAMAGL E MGSP+DSFWSWR+LMYRFAQRLQ Sbjct: 55 PDSARGSAALASGPVLPGMPNLHSHAFQRAMAGLAETMGSPADSFWSWRELMYRFAQRLQ 114 Query: 121 PEHLHAIACHLYIEMLKAGYTSVCEFHYLHHAPGGSPYADRAELALRLMQAASEAGIGMT 180 P L AIA YIEMLKAGYTSVCEFHYLHHAP G+PYAD AE+A L+QAA ++GIGMT Sbjct: 115 PRQLEAIARQTYIEMLKAGYTSVCEFHYLHHAPDGAPYADPAEMAWPLLQAAGQSGIGMT 174 Query: 181 LLPVLYQYGGFGGQPGSQEQARFIATPDDLLALRERLLHALPENPMRRYGAAPHSLRAVS 240 LLPVLYQ GG GG+P S EQ RF+A P LL LRERLL +PEN MRRYG APHSLRAV+ Sbjct: 175 LLPVLYQQGGLGGRPVSAEQRRFVAAPSWLLGLRERLLQHMPENDMRRYGVAPHSLRAVA 234 Query: 241 PQGLEELVSGLRQQPGGRDAPVHIHVAEQWREIQDCLAWCGQRPVQLLLSLQEVDARWCL 300 P GLEEL+SGL QPGG DAP+HIHVAEQ RE++DCLAW GQRPVQ LLS Q VDARWCL Sbjct: 235 PTGLEELLSGLAGQPGGSDAPIHIHVAEQLREVEDCLAWSGQRPVQWLLSSQPVDARWCL 294 Query: 301 IHATHMDQGEYLDLAASGAIVGLCPTTEANLGDGIIDAGQLLQSRTPWGLGSDSNIAINP 360 +HATHMD EY +A SGA+VGLCPTTEANLGDG+IDA +L+ S WG+GSDSNIAI+ Sbjct: 295 VHATHMDDEEYRAVAGSGAVVGLCPTTEANLGDGVIDAPRLIDSAARWGIGSDSNIAISL 354 Query: 361 RSELRLLEYGQRLHHRRRNVLASEASPATADRLFAQAVAGGAAASGRAVAGLAVGQQADF 420 R+ELRLLEY QRLHHRRRNVLA +PA ADRLF QA+AGGA A+GRAVAGL GQ+AD Sbjct: 355 RAELRLLEYAQRLHHRRRNVLAVIDAPAVADRLFCQALAGGAQAAGRAVAGLMPGQRADL 414 Query: 421 VVLDGDDVNLADRSPGQLLSALVFCEHDGQPIQDVYVGGRQVVTAGQHPLQDDARRAYRR 480 VVLD D VNLA RS QLLSALVFCEHDG I DVYVGGRQVV G+H L D AR YR Sbjct: 415 VVLDPDHVNLAQRSSTQLLSALVFCEHDGPMIGDVYVGGRQVVKEGRHALDDRAREDYRH 474 Query: 481 AIAELLKD 488 A+A LLKD Sbjct: 475 ALAALLKD 482 >ref|ZP_03696659.1| formiminoglutamate deiminase [Lutiella nitroferrum 2002] gb|EEG10179.1| formiminoglutamate deiminase [Lutiella nitroferrum 2002] Length = 463 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 275/462 (59%), Positives = 333/462 (72%), Gaps = 5/462 (1%) Query: 27 SARALFCPLALLPDGWQHDVLLRWDDSGRL--IEVSVRSPRGEAAQASGPVIAGMPNLHS 84 S +LF ALLP+GW+ +VLL WD G L +E P G +A+GPVIAGMPNLHS Sbjct: 4 STHSLFAERALLPEGWRRNVLLSWDAHGLLTAVEPDAALPAG-VERAAGPVIAGMPNLHS 62 Query: 85 HAFQRAMAGLTEVMGSPSDSFWSWRKLMYRFAQRLQPEHLHAIACHLYIEMLKAGYTSVC 144 HAFQRAMAGLTE +G P DSFWSWR LMYRFA RL+P+ L A+A LY+EM KAGYTSVC Sbjct: 63 HAFQRAMAGLTEYLGHPQDSFWSWRSLMYRFAARLKPDTLEAVARQLYVEMAKAGYTSVC 122 Query: 145 EFHYLHHAPGGSPYADRAELALRLMQAASEAGIGMTLLPVLYQYGGFGGQPGSQEQARFI 204 EFHY+HH G PYA+ AE RL+ AA++AGIG+TLLPVLYQ GFG +P EQARFI Sbjct: 123 EFHYVHHDANGKPYANPAEHGERLIAAAADAGIGLTLLPVLYQQSGFGAKPPLPEQARFI 182 Query: 205 ATPDDLLALRERLLHALPENPMRRYGAAPHSLRAVSPQGLEELVSGLRQQPGGRDAPVHI 264 A+ D +L L RL P++ RYG APHSLRAV+P LE L SGL G AP+HI Sbjct: 183 ASTDWMLDLLARLRRDHPQHAGLRYGVAPHSLRAVTPATLEALRSGLHGADPG--APIHI 240 Query: 265 HVAEQWREIQDCLAWCGQRPVQLLLSLQEVDARWCLIHATHMDQGEYLDLAASGAIVGLC 324 H+AEQ +E+ DC+A G+RPV+ LL Q +D RWCL+HATHM E DLAASGA+ G+C Sbjct: 241 HIAEQTKEVDDCVAELGKRPVRWLLDNQPLDERWCLVHATHMTPDETADLAASGAVAGIC 300 Query: 325 PTTEANLGDGIIDAGQLLQSRTPWGLGSDSNIAINPRSELRLLEYGQRLHHRRRNVLASE 384 PTTEANLGDGI D L + WG+GSDS+++++ ELRLLEY QRL RRRN LAS Sbjct: 301 PTTEANLGDGIFDGVAYLAAGGNWGIGSDSHVSVSLVEELRLLEYSQRLRDRRRNALASA 360 Query: 385 ASPATADRLFAQAVAGGAAASGRAVAGLAVGQQADFVVLDGDDVNLADRSPGQLLSALVF 444 +P ADRL+AQAVAGGA A+GR VAGLA GQ+AD +VLD + NLA R+ QLL+ LVF Sbjct: 361 DAPLVADRLYAQAVAGGALATGRPVAGLAPGQRADLLVLDAEHPNLAQRAESQLLAGLVF 420 Query: 445 CEHDGQPIQDVYVGGRQVVTAGQHPLQDDARRAYRRAIAELL 486 C+H PI+DVY GGR++VT +H + A R Y+ A+AELL Sbjct: 421 CQHGETPIRDVYAGGRRIVTERRHVSEAAAARGYQEALAELL 462 >ref|YP_004848931.1| formiminoglutamate deiminase [Pseudogulbenkiania sp. NH8B] dbj|BAK78517.1| formiminoglutamate deiminase [Pseudogulbenkiania sp. NH8B] Length = 463 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 274/462 (59%), Positives = 331/462 (71%), Gaps = 5/462 (1%) Query: 27 SARALFCPLALLPDGWQHDVLLRWDDSGRL--IEVSVRSPRGEAAQASGPVIAGMPNLHS 84 S +LF ALLP+GW+ +VLL WD G L +E P G +A+GPVIAGMPNLHS Sbjct: 4 STHSLFAERALLPEGWRRNVLLSWDAHGLLTAVEPDAVLPAG-VERAAGPVIAGMPNLHS 62 Query: 85 HAFQRAMAGLTEVMGSPSDSFWSWRKLMYRFAQRLQPEHLHAIACHLYIEMLKAGYTSVC 144 HAFQRAMAGLTE +G P DSFWSWR LMYRFA RL P+ L A+A LY+EM KAGYTSVC Sbjct: 63 HAFQRAMAGLTEYLGHPQDSFWSWRSLMYRFAARLTPDTLEAVARQLYVEMAKAGYTSVC 122 Query: 145 EFHYLHHAPGGSPYADRAELALRLMQAASEAGIGMTLLPVLYQYGGFGGQPGSQEQARFI 204 EFHY+HH G PYA+ AE RL+ AA++AGIG+TLLPVLYQ GFG +P EQARFI Sbjct: 123 EFHYVHHDANGKPYANPAEHGERLIAAAADAGIGLTLLPVLYQQSGFGAKPPLPEQARFI 182 Query: 205 ATPDDLLALRERLLHALPENPMRRYGAAPHSLRAVSPQGLEELVSGLRQQPGGRDAPVHI 264 A+ D +L L RL P++ RYG APHSLRAV+P LE L SGL G AP+HI Sbjct: 183 ASTDWMLDLLARLRRDHPQHAGLRYGVAPHSLRAVTPATLEALRSGLHGADPG--APIHI 240 Query: 265 HVAEQWREIQDCLAWCGQRPVQLLLSLQEVDARWCLIHATHMDQGEYLDLAASGAIVGLC 324 H+AEQ +E+ DC+A G+RPV+ LL Q +D RWCL+HATHM E DLAASGA+ G+C Sbjct: 241 HIAEQTKEVDDCVAELGKRPVRWLLDNQPLDERWCLVHATHMTPDETADLAASGAVAGIC 300 Query: 325 PTTEANLGDGIIDAGQLLQSRTPWGLGSDSNIAINPRSELRLLEYGQRLHHRRRNVLASE 384 PTTEANLGDGI D L + WG+GSDS+++++ ELRLLEY QRL RRRN LAS Sbjct: 301 PTTEANLGDGIFDGVAYLAAGGHWGIGSDSHVSVSLVEELRLLEYSQRLRDRRRNALASA 360 Query: 385 ASPATADRLFAQAVAGGAAASGRAVAGLAVGQQADFVVLDGDDVNLADRSPGQLLSALVF 444 +P ADRL+AQAVAGGA A+GR VAGLA GQ+AD +VLD + NLA R+ QLL+ LVF Sbjct: 361 DAPLVADRLYAQAVAGGAQATGRPVAGLAPGQRADLLVLDAEHPNLAQRAESQLLAGLVF 420 Query: 445 CEHDGQPIQDVYVGGRQVVTAGQHPLQDDARRAYRRAIAELL 486 C+H PI+DVY GGR++V +H + A R Y+ A+AELL Sbjct: 421 CQHGETPIRDVYAGGRRIVAERRHVSEAAAARGYQEALAELL 462 >ref|YP_001858037.1| N-formimino-L-glutamate deiminase [Burkholderia phymatum STM815] gb|ACC70991.1| formiminoglutamate deiminase [Burkholderia phymatum STM815] Length = 476 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 266/467 (56%), Positives = 324/467 (69%), Gaps = 7/467 (1%) Query: 26 QSARALFCPLALLPDGWQHDVLLRWDDSGRLIEVSVRSPR-GEAAQASGPVIAGMPNLHS 84 ++ ++LF A LP+GW+ +VLL+WD G L+ V+ +P A+A GPV+ GMPNLHS Sbjct: 12 EATQSLFADHAYLPEGWRRNVLLQWDAQGALVAVTPDAPAPAGVAKAHGPVLPGMPNLHS 71 Query: 85 HAFQRAMAGLTEVMGSPS----DSFWSWRKLMYRFAQRLQPEHLHAIACHLYIEMLKAGY 140 HAFQRAMAGLTE + DSFWSWR LMYRFA R+ PE L +IA LYIEMLKAGY Sbjct: 72 HAFQRAMAGLTEYRAALGKGVVDSFWSWRDLMYRFAARITPEGLASIAQWLYIEMLKAGY 131 Query: 141 TSVCEFHYLHHAPGGSPYADRAELALRLMQAASEAGIGMTLLPVLYQYGGFGGQPGSQEQ 200 TSVCEFHY+HH G YA+ AELA R++ AASE+GIG+T+LPVLYQY GFG QP +Q Sbjct: 132 TSVCEFHYVHHMQDGGRYANEAELAQRVVDAASESGIGITMLPVLYQYAGFGAQPPRDDQ 191 Query: 201 ARFIATPDDLLALRERLLHALPENPMRRYGAAPHSLRAVSPQGLEELVSGLRQQPGGRDA 260 RFI TPD LLAL + L A PE+ RYG APHSLRAVS L L++GL G A Sbjct: 192 RRFINTPDSLLALLDTLRRARPEHGALRYGVAPHSLRAVSNDSLRALLNGLDAMSPG--A 249 Query: 261 PVHIHVAEQWREIQDCLAWCGQRPVQLLLSLQEVDARWCLIHATHMDQGEYLDLAASGAI 320 PVHIH+AEQ E+ C+ G RPVQ LL +VDA WCL+HATH+D E LA SGAI Sbjct: 250 PVHIHIAEQTAEVDACVETEGARPVQWLLDRFDVDAHWCLVHATHVDADETARLAKSGAI 309 Query: 321 VGLCPTTEANLGDGIIDAGQLLQSRTPWGLGSDSNIAINPRSELRLLEYGQRLHHRRRNV 380 GLC TTEANLGDGI A L + G+GSDS+I ++ R+ELRLLEYGQRL R+RNV Sbjct: 310 AGLCLTTEANLGDGIFPAHDYLALKGRIGVGSDSHIGVDWRAELRLLEYGQRLSRRQRNV 369 Query: 381 LASEASPATADRLFAQAVAGGAAASGRAVAGLAVGQQADFVVLDGDDVNLADRSPGQLLS 440 LAS P ADRL+A ++ GGA A+GRAV L G +ADF+VLD + NLA++ LS Sbjct: 370 LASADMPRVADRLYAGSLEGGALATGRAVGALKAGARADFMVLDANHPNLAEQPGDAWLS 429 Query: 441 ALVFCEHDGQPIQDVYVGGRQVVTAGQHPLQDDARRAYRRAIAELLK 487 +VFCEH P++DVY GG +VV +H +D+A YR A+AELLK Sbjct: 430 GVVFCEHGETPVRDVYAGGAKVVDNRRHRDEDEAYANYRAALAELLK 476 >ref|YP_003907426.1| formiminoglutamate deiminase [Burkholderia sp. CCGE1003] gb|ADN58135.1| formiminoglutamate deiminase [Burkholderia sp. CCGE1003] Length = 468 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 265/471 (56%), Positives = 327/471 (69%), Gaps = 14/471 (2%) Query: 26 QSARALFCPLALLPDGWQHDVLLRWDDSGRLIEVSVRSPRGEAA-----QASGPVIAGMP 80 Q+ ++LF A LPDGW+ +VLL WD SG L V+ +P + A +A+GP++ GMP Sbjct: 3 QAKQSLFAEHAYLPDGWRRNVLLEWDASGTLTAVTPDAPITDEAHAGTPKAAGPILPGMP 62 Query: 81 NLHSHAFQRAMAGLTEVMGSP----SDSFWSWRKLMYRFAQRLQPEHLHAIACHLYIEML 136 NLHSHAFQRAMAGLTE + +D+FWSWR LMYRFA R+ PE L ++A LYIEML Sbjct: 63 NLHSHAFQRAMAGLTEYRAASGPGATDNFWSWRDLMYRFAARITPEGLASVAQWLYIEML 122 Query: 137 KAGYTSVCEFHYLHHAPGGSPYADRAELALRLMQAASEAGIGMTLLPVLYQYGGFGGQPG 196 KAGYTSVCEFHY+HHAP G YA++AELA R++ AAS AGIGMT+LPVLYQY GFG + Sbjct: 123 KAGYTSVCEFHYVHHAPDGHRYANQAELAQRVVDAASAAGIGMTMLPVLYQYSGFGARAP 182 Query: 197 SQEQARFIATPDDLLALRERLLHALPENPMRRYGAAPHSLRAVSPQGLEELVSGLRQQPG 256 ++Q RF+ TP+ LL L L A PENP RYG APHSLRAVS Q L L+ GL Sbjct: 183 REDQRRFVNTPEGLLELLATLRAARPENPALRYGVAPHSLRAVSEQSLRALLQGLEDS-- 240 Query: 257 GRDAPVHIHVAEQWREIQDCLAWCGQRPVQLLLSLQEVDARWCLIHATHMDQGEYLDLAA 316 APVHIH+AEQ E+ CL G RPVQ LL +VD+RWCL+HATH+D GE L LA Sbjct: 241 ---APVHIHIAEQTAEVDACLETEGARPVQWLLDRFDVDSRWCLVHATHVDAGETLALAK 297 Query: 317 SGAIVGLCPTTEANLGDGIIDAGQLLQSRTPWGLGSDSNIAINPRSELRLLEYGQRLHHR 376 SGA+ GLC TTEANLGDGI A L ++ G+GSDS+I ++ R+ELRLLEYGQRL R Sbjct: 298 SGAVAGLCLTTEANLGDGIFPAHDYLNAQGRIGVGSDSHIGVDWRAELRLLEYGQRLVRR 357 Query: 377 RRNVLASEASPATADRLFAQAVAGGAAASGRAVAGLAVGQQADFVVLDGDDVNLADRSPG 436 +RNVLAS + ADRLF A+ GGA A+GRA L G +AD++VLD + ++A+ + Sbjct: 358 QRNVLASAQASYVADRLFDAALGGGAQATGRATGALQAGHRADWLVLDPNHPSIAEHAQH 417 Query: 437 QLLSALVFCEHDGQPIQDVYVGGRQVVTAGQHPLQDDARRAYRRAIAELLK 487 LS LVFCEH PI+DVY GG +VV +H ++ A YR A+AELLK Sbjct: 418 AWLSGLVFCEHGETPIRDVYAGGDKVVDQRRHRDEEGAYARYRTALAELLK 468