BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1687.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775695.1| glutamine ABC transporter ATPase [Herbaspiri... 386 e-105 ref|NP_880555.1| glutamine transport ATP-binding protein [Bordet... 331 7e-89 ref|ZP_02357722.1| ABC-type transporter, ATPase component: PAAT ... 331 8e-89 ref|ZP_02364848.1| ABC-type transporter, ATPase component: PAAT ... 331 8e-89 ref|ZP_04761967.1| ABC transporter related protein [Acidovorax d... 322 3e-86 >ref|YP_003775695.1| glutamine ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63787.1| ABC-type glutamine transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 210/254 (82%), Positives = 232/254 (91%) Query: 1 MEHSVVDIKGLRKSFGSHLVLKDIDFSVSPSQVVVIIGPSGSGKSTLLRCLNGLETAEGG 60 M +V++ GLRKSFG+H+VLKD+D SV+PSQVVV+IGPSGSGKST LRCLNGLE AEGG Sbjct: 1 MTEPIVEVSGLRKSFGAHVVLKDLDLSVAPSQVVVVIGPSGSGKSTFLRCLNGLEKAEGG 60 Query: 61 TVVVGGHTVVEGGRMMPEAMLDALRAEVGMVFQSFNLFPHLNVLDNITLAPTCLRGVPRK 120 TV V G VVEGGRMMPEAMLD LRAEVGMVFQSFNLFPHL VLDNITLAPTCLRG+ RK Sbjct: 61 TVKVCGRPVVEGGRMMPEAMLDLLRAEVGMVFQSFNLFPHLTVLDNITLAPTCLRGMSRK 120 Query: 121 AAQEQGLRLLRKVGLEHKAKEYPGTLSGGQKQRVAIARALAMEPKVMLFDEPTSALDPEL 180 AAQ+Q L+LL KVGL HKAK YPGTLSGGQKQRVAIARALAMEP+VMLFDEPTSALDPEL Sbjct: 121 AAQQQALQLLEKVGLAHKAKAYPGTLSGGQKQRVAIARALAMEPQVMLFDEPTSALDPEL 180 Query: 181 VGEVLQVMQDLASDGMTMLIVTHEMGFAREVADVVVVMDHGSIVESGPPSEIFTSPREAR 240 VGEVLQV++ LA++GMTM+IVTHEMGFAREVADVVVVMDHGSIVE+GPP IFT+P++AR Sbjct: 181 VGEVLQVIRALAAEGMTMIIVTHEMGFAREVADVVVVMDHGSIVEAGPPGAIFTAPQQAR 240 Query: 241 TRSFLQTMLAREVG 254 TRSFLQTMLAR+V Sbjct: 241 TRSFLQTMLARQVA 254 >ref|NP_880555.1| glutamine transport ATP-binding protein [Bordetella pertussis Tohama I] ref|NP_883851.1| glutamine transport ATP-binding protein [Bordetella parapertussis 12822] ref|NP_889181.1| glutamine transport ATP-binding protein [Bordetella bronchiseptica RB50] emb|CAE42140.1| glutamine transport ATP-binding protein [Bordetella pertussis Tohama I] emb|CAE36868.1| glutamine transport ATP-binding protein [Bordetella parapertussis] emb|CAE33137.1| glutamine transport ATP-binding protein [Bordetella bronchiseptica RB50] gb|AEE67171.1| glutamine transport ATP-binding protein [Bordetella pertussis CS] Length = 257 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 174/254 (68%), Positives = 208/254 (81%) Query: 3 HSVVDIKGLRKSFGSHLVLKDIDFSVSPSQVVVIIGPSGSGKSTLLRCLNGLETAEGGTV 62 ++ I+GLRK++G H VL+ IDF+V SQVVV+IGPSGSGKSTLLRC NGLE A+GGT+ Sbjct: 4 QEMIRIRGLRKAYGEHEVLRGIDFNVEASQVVVVIGPSGSGKSTLLRCCNGLEVAQGGTI 63 Query: 63 VVGGHTVVEGGRMMPEAMLDALRAEVGMVFQSFNLFPHLNVLDNITLAPTCLRGVPRKAA 122 + GH +++ GR++PEA L+ LR +VGMVFQ FNLFPHL+VLDN+T+ P LRG+ R A Sbjct: 64 DICGHNLLKDGRLLPEAELNRLRMQVGMVFQGFNLFPHLSVLDNVTVGPRTLRGMSRAQA 123 Query: 123 QEQGLRLLRKVGLEHKAKEYPGTLSGGQKQRVAIARALAMEPKVMLFDEPTSALDPELVG 182 +E G LL KVGL K PG+LSGGQKQRVAIARALAM+P+VMLFDEPTSALDPELVG Sbjct: 124 EELGGDLLAKVGLREKMAAMPGSLSGGQKQRVAIARALAMQPRVMLFDEPTSALDPELVG 183 Query: 183 EVLQVMQDLASDGMTMLIVTHEMGFAREVADVVVVMDHGSIVESGPPSEIFTSPREARTR 242 EVLQVM+ LA +GMTM++VTHEMGFAREVADVV VMD GSIVESGPP IF+ PREARTR Sbjct: 184 EVLQVMKLLAREGMTMMVVTHEMGFAREVADVVAVMDGGSIVESGPPELIFSQPREARTR 243 Query: 243 SFLQTMLAREVGHA 256 +FLQ +L+ G A Sbjct: 244 AFLQAVLSASQGAA 257 >ref|ZP_02357722.1| ABC-type transporter, ATPase component: PAAT family protein [Burkholderia oklahomensis EO147] Length = 255 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 173/247 (70%), Positives = 204/247 (82%) Query: 5 VVDIKGLRKSFGSHLVLKDIDFSVSPSQVVVIIGPSGSGKSTLLRCLNGLETAEGGTVVV 64 +V I+GL KSFGSH+VL IDF + P QVVV+IGPSGSGKST LRC NGLE EGGT+ + Sbjct: 8 IVRIRGLSKSFGSHVVLNGIDFDIGPQQVVVVIGPSGSGKSTFLRCCNGLEQPEGGTIDI 67 Query: 65 GGHTVVEGGRMMPEAMLDALRAEVGMVFQSFNLFPHLNVLDNITLAPTCLRGVPRKAAQE 124 GH +V+ G M+ E L+ALR EVGMVFQSFNLFPHL+VL NIT+ P LRG + A+ Sbjct: 68 CGHRLVDRGAMLGERSLNALRTEVGMVFQSFNLFPHLSVLHNITVGPRMLRGASKADAEA 127 Query: 125 QGLRLLRKVGLEHKAKEYPGTLSGGQKQRVAIARALAMEPKVMLFDEPTSALDPELVGEV 184 L LL KVGL HKA P +LSGGQKQRVAIARALAM+P+VMLFDEPTSALDPELVGEV Sbjct: 128 SALALLEKVGLAHKAHVMPASLSGGQKQRVAIARALAMQPRVMLFDEPTSALDPELVGEV 187 Query: 185 LQVMQDLASDGMTMLIVTHEMGFAREVADVVVVMDHGSIVESGPPSEIFTSPREARTRSF 244 LQVM+ LAS+GMTM++VTHEMGFA+EVADVVVVMD G+IVE+GPPSEIF++P + RTR+F Sbjct: 188 LQVMKLLASEGMTMVVVTHEMGFAKEVADVVVVMDGGAIVEAGPPSEIFSAPSQPRTRAF 247 Query: 245 LQTMLAR 251 LQ +L+R Sbjct: 248 LQAVLSR 254 >ref|ZP_02364848.1| ABC-type transporter, ATPase component: PAAT family protein [Burkholderia oklahomensis C6786] Length = 255 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 173/247 (70%), Positives = 204/247 (82%) Query: 5 VVDIKGLRKSFGSHLVLKDIDFSVSPSQVVVIIGPSGSGKSTLLRCLNGLETAEGGTVVV 64 +V I+GL KSFGSH+VL IDF + P QVVV+IGPSGSGKST LRC NGLE EGGT+ + Sbjct: 8 IVRIRGLTKSFGSHVVLNGIDFDIEPQQVVVVIGPSGSGKSTFLRCCNGLEQPEGGTIDI 67 Query: 65 GGHTVVEGGRMMPEAMLDALRAEVGMVFQSFNLFPHLNVLDNITLAPTCLRGVPRKAAQE 124 GH +V+ G M+ E L+ALR EVGMVFQSFNLFPHL+VL NIT+ P LRG + A+ Sbjct: 68 CGHRLVDRGAMLGERSLNALRTEVGMVFQSFNLFPHLSVLHNITVGPRMLRGASKADAEA 127 Query: 125 QGLRLLRKVGLEHKAKEYPGTLSGGQKQRVAIARALAMEPKVMLFDEPTSALDPELVGEV 184 L LL KVGL HKA P +LSGGQKQRVAIARALAM+P+VMLFDEPTSALDPELVGEV Sbjct: 128 SALALLEKVGLAHKAHVMPASLSGGQKQRVAIARALAMQPRVMLFDEPTSALDPELVGEV 187 Query: 185 LQVMQDLASDGMTMLIVTHEMGFAREVADVVVVMDHGSIVESGPPSEIFTSPREARTRSF 244 LQVM+ LAS+GMTM++VTHEMGFA+EVADVVVVMD G+IVE+GPPSEIF++P + RTR+F Sbjct: 188 LQVMKLLASEGMTMVVVTHEMGFAKEVADVVVVMDGGAIVEAGPPSEIFSAPSQPRTRAF 247 Query: 245 LQTMLAR 251 LQ +L+R Sbjct: 248 LQAVLSR 254 >ref|ZP_04761967.1| ABC transporter related protein [Acidovorax delafieldii 2AN] gb|EER61251.1| ABC transporter related protein [Acidovorax delafieldii 2AN] Length = 264 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 180/247 (72%), Positives = 206/247 (83%) Query: 5 VVDIKGLRKSFGSHLVLKDIDFSVSPSQVVVIIGPSGSGKSTLLRCLNGLETAEGGTVVV 64 +V I+GLRKSFGSH+VL IDF V PSQVVV+IGPSGSGKST LRC NGLE EGGTV + Sbjct: 17 IVRIRGLRKSFGSHVVLNGIDFDVLPSQVVVVIGPSGSGKSTFLRCCNGLEQPEGGTVEI 76 Query: 65 GGHTVVEGGRMMPEAMLDALRAEVGMVFQSFNLFPHLNVLDNITLAPTCLRGVPRKAAQE 124 G T+V+ GRM+P+ L+ALR EVGMVFQSFNLFPHL+VLDN+TL P LRG+ RK A+E Sbjct: 77 CGRTLVQDGRMLPDHDLNALREEVGMVFQSFNLFPHLSVLDNVTLGPRKLRGLSRKEAEE 136 Query: 125 QGLRLLRKVGLEHKAKEYPGTLSGGQKQRVAIARALAMEPKVMLFDEPTSALDPELVGEV 184 + LL KVGL HKA P +LSGGQKQRVAIARALAMEP+VMLFDEPTSALDPELVGEV Sbjct: 137 RAQALLTKVGLAHKALAMPASLSGGQKQRVAIARALAMEPRVMLFDEPTSALDPELVGEV 196 Query: 185 LQVMQDLASDGMTMLIVTHEMGFAREVADVVVVMDHGSIVESGPPSEIFTSPREARTRSF 244 LQVM+ LAS+GMTM++VTHEM FAREV DVVVVMD G I+ESG P+ IFT+P + RTRSF Sbjct: 197 LQVMKLLASEGMTMMVVTHEMDFAREVGDVVVVMDGGGIIESGQPATIFTNPTQERTRSF 256 Query: 245 LQTMLAR 251 LQ +L R Sbjct: 257 LQAVLTR 263