BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1686.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspi... 330 1e-88 ref|YP_547890.1| amino acid ABC transporter permease [Polaromona... 298 4e-79 ref|ZP_06840839.1| polar amino acid ABC transporter, inner membr... 270 2e-70 ref|YP_553288.1| polar amino acid ABC transporter inner membrane... 270 2e-70 ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia ... 268 3e-70 >ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 204/221 (92%), Positives = 216/221 (97%) Query: 1 MKLDFSGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYL 60 MKLDFSGVW+SWPSL+HGT+VTVEITAASLV+GCVLGLL GLGRL+PQRR++YGLCT YL Sbjct: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQM 120 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYS AY+SEIVRG+IQSIERGQM Sbjct: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 Query: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII Sbjct: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 Query: 181 SITYRSLETYLVIALIYLVLTSVTTLALRRIEKVLRSEGRV 221 S+TYRSLETYL IALIYL+LTSVTTL LRR+EKVLRSEGRV Sbjct: 181 SVTYRSLETYLAIALIYLLLTSVTTLILRRVEKVLRSEGRV 221 >ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 158/221 (71%), Positives = 192/221 (86%) Query: 1 MKLDFSGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYL 60 M+LDFS +W WP LL G +VTVEITAASL+LGCV+GLL G+GRLNP+RR++YGLCT Y+ Sbjct: 1 MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQM 120 ++RGTPLLVQLF+ FFGLP G++LPA+VCG++GLGIYS AY+SE+VRG+IQSI+RGQM Sbjct: 61 AIIRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQM 120 Query: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 EAARS+G+ +AMR V+LPQA VRMIPPLGNEFIALIKNSALVSLLTI D+MHEG+KII Sbjct: 121 EAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKII 180 Query: 181 SITYRSLETYLVIALIYLVLTSVTTLALRRIEKVLRSEGRV 221 S++YRSLE YL IA++Y VLT TTL LRR+E LR+ G V Sbjct: 181 SVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMV 221 >ref|ZP_06840839.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gb|EFG71559.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 222 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 159/221 (71%), Positives = 187/221 (84%) Query: 1 MKLDFSGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYL 60 M+LDFS V WP ++ GT+VTVE+TAASL L CVLGLL G+GRL P+RR++YG CT YL Sbjct: 1 MELDFSPVIAGWPDIMRGTLVTVEVTAASLALSCVLGLLIGIGRLTPKRRMVYGFCTAYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQM 120 T RGTPLLVQLFL FFGLP G++LPA+VCG+LGLG+YSAAY+SEIVRG+IQS++RGQM Sbjct: 61 TFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQM 120 Query: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 EAARS+G+ AMR +ILPQA VRMIPPLGNEFIALIKNSALVSLLTI DLMHEG+KII Sbjct: 121 EAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKII 180 Query: 181 SITYRSLETYLVIALIYLVLTSVTTLALRRIEKVLRSEGRV 221 S++YRSLE YL IAL+YLVLT T AL R+E+ LR+ G V Sbjct: 181 SVSYRSLEVYLAIALVYLVLTQATNYALHRVERRLRAGGMV 221 >ref|YP_553288.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gb|ABE33938.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 222 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 159/221 (71%), Positives = 187/221 (84%) Query: 1 MKLDFSGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYL 60 M+LDFS V WP ++ GT+VTVE+TAASL L CVLGLL G+GRL P+RR++YG CT YL Sbjct: 1 MELDFSPVIAGWPDIMRGTLVTVEVTAASLALSCVLGLLIGIGRLTPKRRMVYGFCTAYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQM 120 T RGTPLLVQLFL FFGLP G++LPA+VCG+LGLG+YSAAY+SEIVRG+IQS++RGQM Sbjct: 61 TFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQM 120 Query: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 EAARS+G+ AMR +ILPQA VRMIPPLGNEFIALIKNSALVSLLTI DLMHEG+KII Sbjct: 121 EAARSIGMSAGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQKII 180 Query: 181 SITYRSLETYLVIALIYLVLTSVTTLALRRIEKVLRSEGRV 221 S++YRSLE YL IAL+YLVLT T AL R+E+ LR+ G V Sbjct: 181 SVSYRSLEVYLAIALVYLVLTQATNYALHRVERRLRAGGMV 221 >ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gb|AAZ60959.1| amino acid ABC transporter membrane protein, PAAT family [Ralstonia eutropha JMP134] Length = 222 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 155/221 (70%), Positives = 189/221 (85%) Query: 1 MKLDFSGVWDSWPSLLHGTMVTVEITAASLVLGCVLGLLTGLGRLNPQRRLLYGLCTFYL 60 M+LDFS V+ WP ++HG +VTVE+TA +LVLGCV+GLL G+GRL+P+RR++Y +CT Y+ Sbjct: 1 MELDFSPVFSGWPDIVHGAIVTVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSAAYISEIVRGSIQSIERGQM 120 T +RGTPLLVQLFL FFGLP ++LPA+VCG++GLG+YS AY+SEIVRG+IQS+E+GQM Sbjct: 61 TFIRGTPLLVQLFLLFFGLPQFNIMLPAFVCGVIGLGVYSGAYVSEIVRGAIQSVEKGQM 120 Query: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGEKII 180 EAARS+G+ AMR VILPQA VRMIPPLGNEFIALIKNSALVSLLTIADLMHEG+KII Sbjct: 121 EAARSIGMSSGQAMRAVILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKII 180 Query: 181 SITYRSLETYLVIALIYLVLTSVTTLALRRIEKVLRSEGRV 221 S++YRSLE YL IAL+YL+LTS L LRR E+ LR G V Sbjct: 181 SVSYRSLEVYLAIALVYLILTSAAGLILRRAEQRLRMGGMV 221