BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1658.p (189 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002537469.1| conserved hypothetical protein [Ricinus comm... 218 2e-55 ref|YP_004752626.1| hypothetical protein CFU_1972 [Collimonas fu... 164 7e-39 ref|YP_001630253.1| putative secreted protein [Bordetella petrii... 141 6e-32 gb|EFV87084.1| hypothetical protein HMPREF0005_05815 [Achromobac... 131 5e-29 gb|EGP48506.1| putative membrane protein [Achromobacter xylosoxi... 126 2e-27 >ref|XP_002537469.1| conserved hypothetical protein [Ricinus communis] gb|EEF24913.1| conserved hypothetical protein [Ricinus communis] Length = 234 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 145/174 (83%), Positives = 158/174 (90%), Gaps = 1/174 (0%) Query: 16 SRRLIGAGVLMIAGAAFSFNAAAESVNSKDKSFMTNAAEAGHAEIEASKIALEKSSNQAV 75 SRRL+ A L+ AG A SF A+AE+ SKDK F+TNAAEAGH E+EASKIALEKSSN AV Sbjct: 62 SRRLLAAAALLTAGVALSFTASAETA-SKDKKFVTNAAEAGHTEVEASKIALEKSSNPAV 120 Query: 76 KDYAQKMIDQHTTVDEQLKQLASSKDVTLPAEPSMAQRAKIAILEKLKGNTFDKRYASMI 135 K +AQKMID+HTTV E+LKQLASSK+V+LP EPSMAQRAKIA+LEKLKGNTFD+RYASMI Sbjct: 121 KQFAQKMIDEHTTVGEELKQLASSKNVSLPEEPSMAQRAKIAVLEKLKGNTFDQRYASMI 180 Query: 136 GVSAHEDAVKLFQKASSSAQDAEVKSFAAKTLPGLEKHLAMGRELKQSLDAGKK 189 GVSAHEDAVKLFQKASSSAQDAEVKSFAAKTLPGLEKHL MGRELKQSLDAGKK Sbjct: 181 GVSAHEDAVKLFQKASSSAQDAEVKSFAAKTLPGLEKHLVMGRELKQSLDAGKK 234 >ref|YP_004752626.1| hypothetical protein CFU_1972 [Collimonas fungivorans Ter331] gb|AEK61803.1| hypothetical protein CFU_1972 [Collimonas fungivorans Ter331] Length = 206 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 106/180 (58%), Positives = 141/180 (78%), Gaps = 3/180 (1%) Query: 12 HTCASRRLIGA-GVLMIAGAAFSFNAA--AESVNSKDKSFMTNAAEAGHAEIEASKIALE 68 H +SR+LI G+ ++AG AFS + A A+S+ +DKSF+T+AA AGHAEI+ASK+ALE Sbjct: 27 HPQSSRKLIAMLGIAVLAGLAFSASQALAADSLARQDKSFLTDAAHAGHAEIDASKLALE 86 Query: 69 KSSNQAVKDYAQKMIDQHTTVDEQLKQLASSKDVTLPAEPSMAQRAKIAILEKLKGNTFD 128 KSSN AVK +A+KMI H V ++LK LA+SK+V++P EP MAQ+AKIAIL KL+G TFD Sbjct: 87 KSSNPAVKSFAEKMIADHGKVGDELKALAASKNVSVPDEPGMAQKAKIAILGKLQGPTFD 146 Query: 129 KRYASMIGVSAHEDAVKLFQKASSSAQDAEVKSFAAKTLPGLEKHLAMGRELKQSLDAGK 188 K+YA MIGVSAH+DAV LF+K ++ A+DA++K FAA LPGL++ L M +LK S+DA K Sbjct: 147 KQYAGMIGVSAHKDAVSLFKKTAAGAKDADIKQFAASNLPGLQERLEMATQLKASVDAEK 206 >ref|YP_001630253.1| putative secreted protein [Bordetella petrii DSM 12804] emb|CAP41984.1| putative secreted protein [Bordetella petrii] Length = 258 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 13/182 (7%) Query: 19 LIGAGVLMIAGA------------AFSFNAAAESVNSKDKSFMTNAAEAGHAEIEASKIA 66 L+ AG ++ AG+ A AA + ++S DK F+ NAA++GHAE+E SK+A Sbjct: 78 LVAAGAMLAAGSGMAQPQPTTPAPATQDAAAEQQLDSSDKDFLENAAQSGHAEVEGSKMA 137 Query: 67 LEKSSNQAVKDYAQKMIDQHTTVDEQLKQLASSKDVTLPAEPSMAQRAKIAILEKLKGNT 126 EK+ N VK +A KM+ HT V ++L LAS K T P PS+ Q+AKI L L + Sbjct: 138 QEKAKNPDVKAFADKMVQDHTKVGQELAALASKKGYTPPEGPSLMQKAKIKTL-GLTDDG 196 Query: 127 FDKRYASMIGVSAHEDAVKLFQKASSSAQDAEVKSFAAKTLPGLEKHLAMGRELKQSLDA 186 FD+ Y + IGVSAHEDAVKLF+ AS++A+DA+VK+FAAKTLP L++HLAM ++L++ + A Sbjct: 197 FDEMYINNIGVSAHEDAVKLFEDASANAKDADVKAFAAKTLPALQEHLAMAKKLQEQVKA 256 Query: 187 GK 188 K Sbjct: 257 RK 258 >gb|EFV87084.1| hypothetical protein HMPREF0005_05815 [Achromobacter xylosoxidans C54] Length = 182 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 80/159 (50%), Positives = 107/159 (67%), Gaps = 1/159 (0%) Query: 27 IAGAAFSFNAAAESVNSKDKSFMTNAAEAGHAEIEASKIALEKSSNQAVKDYAQKMIDQH 86 +A A A ++S+D+ FM NAA+AGH E+E SK+ALEK+ + VK +AQKMID H Sbjct: 24 MAQQAVPSAPAPTKLDSRDRDFMENAAQAGHLEVEGSKLALEKARSGEVKTFAQKMIDDH 83 Query: 87 TTVDEQLKQLASSKDVTLPAEPSMAQRAKIAILEKLKGNTFDKRYASMIGVSAHEDAVKL 146 +QL LA SK +P EPS+ Q+A++ L L+ FDK YA IGV AHEDAVKL Sbjct: 84 GKAGQQLAALAKSKGYEVPTEPSLVQKARLQAL-GLRDEGFDKAYADEIGVGAHEDAVKL 142 Query: 147 FQKASSSAQDAEVKSFAAKTLPGLEKHLAMGRELKQSLD 185 F+KAS+ +D +VK FA +TLP L++HL M + LKQ+ D Sbjct: 143 FEKASNDVKDPDVKQFAIQTLPTLQQHLQMAKTLKQATD 181 >gb|EGP48506.1| putative membrane protein [Achromobacter xylosoxidans AXX-A] Length = 180 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 1/145 (0%) Query: 41 VNSKDKSFMTNAAEAGHAEIEASKIALEKSSNQAVKDYAQKMIDQHTTVDEQLKQLASSK 100 ++S D+ F+ +AA+AGH E+E SK+ALEK + VK +AQKMID H +QL LA K Sbjct: 36 LDSGDRDFLESAAQAGHLEVEGSKMALEKGHSPDVKTFAQKMIDDHGKAGQQLAALAKGK 95 Query: 101 DVTLPAEPSMAQRAKIAILEKLKGNTFDKRYASMIGVSAHEDAVKLFQKASSSAQDAEVK 160 +P EPS+ Q+A++ L L+ FDK YA IGV AHEDAVKLF+KAS+ +D EVK Sbjct: 96 GYEVPTEPSLVQKARLKAL-GLRDEGFDKAYADEIGVDAHEDAVKLFEKASNEVKDPEVK 154 Query: 161 SFAAKTLPGLEKHLAMGRELKQSLD 185 FA +TLP L++HL M + LKQ+ + Sbjct: 155 QFAIQTLPTLQQHLQMAKTLKQATE 179