BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1642.p (477 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775661.1| NAD-dependent aldehyde dehydrogenase [Herbas... 879 0.0 ref|YP_524820.1| betaine-aldehyde dehydrogenase [Rhodoferax ferr... 753 0.0 ref|NP_886505.1| aldehyde dehydrogenase [Bordetella parapertussi... 744 0.0 ref|NP_879322.1| aldehyde dehydrogenase [Bordetella pertussis To... 741 0.0 ref|YP_001628634.1| putative aldehyde dehydrogenase [Bordetella ... 724 0.0 >ref|YP_003775661.1| NAD-dependent aldehyde dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ63753.1| NAD-dependent aldehyde dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 477 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 446/477 (93%), Positives = 462/477 (96%) Query: 1 MKQHFIDNRWVAPASGESIPVIDPSDGQAFEAIARGNAADIDQAVQAARRAYESAWGKLS 60 MKQHFI NRWVAP SGESIPV+DPSDGQ F+AIARGNA DIDQAV+AAR AYE AWG+LS Sbjct: 1 MKQHFIANRWVAPTSGESIPVLDPSDGQPFDAIARGNATDIDQAVRAARLAYEGAWGRLS 60 Query: 61 AAERSRLLMKLAHKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG 120 AAERSRLLMKLA+KLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG Sbjct: 61 AAERSRLLMKLAYKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG 120 Query: 121 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLSL 180 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLS+ Sbjct: 121 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLSI 180 Query: 181 LRVAELAAEAGFPEGALNIVTGYGHEAGDLLVKHPDVDHVSFTGSPNVGKLVVRAAAEHH 240 LRVAELAAE GFPEGALNIVTGYGHEAGDLLVKHPDV+H+SFTGSPNVGKLVVRAAAEHH Sbjct: 181 LRVAELAAEVGFPEGALNIVTGYGHEAGDLLVKHPDVNHISFTGSPNVGKLVVRAAAEHH 240 Query: 241 TPVTLELGGKSPQVVFEDADMDALLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL 300 TPVTLELGGKSPQ+VFEDADM+A+LPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL Sbjct: 241 TPVTLELGGKSPQIVFEDADMEAMLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL 300 Query: 301 AGLFSQLKVGSSQMDLDCGPLIRKTQQERVAGFLSDARRDGIALVAQGEIAPEAPAGGFY 360 +GLFSQL+VGSSQMDLDCGPLIRKTQQERVAGFLSDA+RDGIAL AQG+IA P GGFY Sbjct: 301 SGLFSQLQVGSSQMDLDCGPLIRKTQQERVAGFLSDAQRDGIALAAQGKIAAGVPTGGFY 360 Query: 361 QTPALLRDVPPQHRLAQEEVFGPVLAAMSFEDEAEAIALANGTDYGLVASVWTRDGGRQM 420 Q PALLRDVPP+HRLAQEEVFGPVLAAM FEDEA AIALANGTDYGLVASVWTRDGGRQM Sbjct: 361 QAPALLRDVPPRHRLAQEEVFGPVLAAMPFEDEAHAIALANGTDYGLVASVWTRDGGRQM 420 Query: 421 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRHG 477 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRHG Sbjct: 421 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRHG 477 >ref|YP_524820.1| betaine-aldehyde dehydrogenase [Rhodoferax ferrireducens T118] gb|ABD71289.1| Betaine-aldehyde dehydrogenase [Rhodoferax ferrireducens T118] Length = 477 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 384/476 (80%), Positives = 421/476 (88%) Query: 1 MKQHFIDNRWVAPASGESIPVIDPSDGQAFEAIARGNAADIDQAVQAARRAYESAWGKLS 60 MKQHFI+NRW +PASGESIPV+DPSDGQ FEAIARGN ADIDQAV AAR AYE WG+LS Sbjct: 1 MKQHFINNRWASPASGESIPVVDPSDGQVFEAIARGNTADIDQAVSAARAAYEGDWGRLS 60 Query: 61 AAERSRLLMKLAHKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG 120 A ER RL+ KLA K+ D EELAQ+E RDCGKP+KQARADAAA+ RYFEFYAGAADKL G Sbjct: 61 AMERGRLMQKLAQKMSDQAEELAQIEARDCGKPVKQARADAAAVARYFEFYAGAADKLLG 120 Query: 121 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLSL 180 TIPYQ GYTVL LREPHGVTGHI+PWNYPMQIFGR VGGALAAGN CVVKPAEDACLSL Sbjct: 121 YTIPYQNGYTVLALREPHGVTGHIIPWNYPMQIFGRSVGGALAAGNACVVKPAEDACLSL 180 Query: 181 LRVAELAAEAGFPEGALNIVTGYGHEAGDLLVKHPDVDHVSFTGSPNVGKLVVRAAAEHH 240 LR+AELAAE GFP GALNIVTGYGHE GD LVKHP +DHVSFTGSP +GK+VVRAAAE+H Sbjct: 181 LRIAELAAEVGFPAGALNIVTGYGHEVGDALVKHPGIDHVSFTGSPAIGKVVVRAAAENH 240 Query: 241 TPVTLELGGKSPQVVFEDADMDALLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL 300 TPVTLELGGKSPQ+VF D D DA+LPVVVNAIVQNAGQTCSAGSRLLV+R AYE+VL RL Sbjct: 241 TPVTLELGGKSPQIVFADTDFDAMLPVVVNAIVQNAGQTCSAGSRLLVERKAYEEVLARL 300 Query: 301 AGLFSQLKVGSSQMDLDCGPLIRKTQQERVAGFLSDARRDGIALVAQGEIAPEAPAGGFY 360 + FSQL+VG S MDLDCGPLIR+TQ +RVAGFL +A RDG+A+ QG I +AP+ GFY Sbjct: 301 SKAFSQLQVGPSSMDLDCGPLIRQTQLQRVAGFLEEAGRDGLAIAGQGRIVADAPSTGFY 360 Query: 361 QTPALLRDVPPQHRLAQEEVFGPVLAAMSFEDEAEAIALANGTDYGLVASVWTRDGGRQM 420 Q P L+RDVPP HRLAQEEVFGPV+AAM F+DEA A+ LANGT YGLV+S+WTRDG RQM Sbjct: 361 QAPTLVRDVPPAHRLAQEEVFGPVIAAMPFDDEAGAVKLANGTAYGLVSSIWTRDGARQM 420 Query: 421 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRH 476 RLAR +RSGQVFINNYGAGGGVELPFGGVKASG+GREKGFEALYGFTVLKTIAI+H Sbjct: 421 RLARKVRSGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALYGFTVLKTIAIKH 476 >ref|NP_886505.1| aldehyde dehydrogenase [Bordetella parapertussis 12822] ref|NP_891499.1| aldehyde dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE35329.1| probable aldehyde dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE39658.1| probable aldehyde dehydrogenase [Bordetella parapertussis] Length = 490 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 373/476 (78%), Positives = 414/476 (86%) Query: 1 MKQHFIDNRWVAPASGESIPVIDPSDGQAFEAIARGNAADIDQAVQAARRAYESAWGKLS 60 MKQHFIDN V +SGE IPVIDPS GQ F++IARGNAADID AVQAARRAYE AWG+LS Sbjct: 14 MKQHFIDNASVPGSSGERIPVIDPSTGQEFDSIARGNAADIDLAVQAARRAYEGAWGRLS 73 Query: 61 AAERSRLLMKLAHKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG 120 AAER RL++ L+ K+ +H++EL LE RDCGKP+KQARAD AI RYFE+Y GAADKLHG Sbjct: 74 AAERGRLMLALSLKVLEHRDELTALESRDCGKPLKQARADVLAIARYFEYYGGAADKLHG 133 Query: 121 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLSL 180 +TIPYQ GYTVLTLREPHGVTGH+VPWNYP+QIFGR VG ALAAGN CVVKPAEDACLSL Sbjct: 134 ETIPYQQGYTVLTLREPHGVTGHVVPWNYPLQIFGRSVGAALAAGNACVVKPAEDACLSL 193 Query: 181 LRVAELAAEAGFPEGALNIVTGYGHEAGDLLVKHPDVDHVSFTGSPNVGKLVVRAAAEHH 240 LRVAELAAE GFP GALNIVTGYGHEAGD L +HP +DH+SFTGSP VG LV + AAE H Sbjct: 194 LRVAELAAETGFPAGALNIVTGYGHEAGDALTRHPGIDHISFTGSPRVGVLVTQTAAERH 253 Query: 241 TPVTLELGGKSPQVVFEDADMDALLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL 300 PVTLELGGKSPQ+VF DAD+DAL+PV VNAIVQNAGQTCSAGSRLLV+RGAYE+VLERL Sbjct: 254 VPVTLELGGKSPQIVFADADLDALVPVAVNAIVQNAGQTCSAGSRLLVERGAYERVLERL 313 Query: 301 AGLFSQLKVGSSQMDLDCGPLIRKTQQERVAGFLSDARRDGIALVAQGEIAPEAPAGGFY 360 F+ L+ G +Q DLDCGPLIRKTQQERV GFL AR DGIA VAQG I PEAPA G+Y Sbjct: 314 GAAFAALRAGPAQSDLDCGPLIRKTQQERVRGFLDLARGDGIATVAQGRIVPEAPAEGYY 373 Query: 361 QTPALLRDVPPQHRLAQEEVFGPVLAAMSFEDEAEAIALANGTDYGLVASVWTRDGGRQM 420 Q P LLRDVP H LAQEEVFGPVLAA+ F+DEA+A+ +AN T+YGL ASVWTRDGGRQ+ Sbjct: 374 QAPTLLRDVPVDHPLAQEEVFGPVLAAIPFDDEADAVRIANATEYGLAASVWTRDGGRQL 433 Query: 421 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRH 476 R+AR +RSGQVFINNYGAGGG+ELPFGGVKASGHGREKGFEALYGFTVLKTI+I+H Sbjct: 434 RIARKVRSGQVFINNYGAGGGIELPFGGVKASGHGREKGFEALYGFTVLKTISIKH 489 >ref|NP_879322.1| aldehyde dehydrogenase [Bordetella pertussis Tohama I] emb|CAE44795.1| probable aldehyde dehydrogenase [Bordetella pertussis Tohama I] gb|AEE65937.1| aldehyde dehydrogenase [Bordetella pertussis CS] Length = 477 Score = 741 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 373/476 (78%), Positives = 414/476 (86%) Query: 1 MKQHFIDNRWVAPASGESIPVIDPSDGQAFEAIARGNAADIDQAVQAARRAYESAWGKLS 60 MKQHFIDN V +SGE IPVIDPS GQ F++IARGNAADID AVQAARRAYE AWG+LS Sbjct: 1 MKQHFIDNASVPGSSGERIPVIDPSTGQEFDSIARGNAADIDLAVQAARRAYEGAWGRLS 60 Query: 61 AAERSRLLMKLAHKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLHG 120 AAER RL++ L+ K+ +H++EL LE RDCGKP+KQARAD AI RYFE+Y GAADKLHG Sbjct: 61 AAERGRLMLALSLKVLEHRDELTALESRDCGKPLKQARADVIAIARYFEYYGGAADKLHG 120 Query: 121 DTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLSL 180 +TIPYQ GYTVLTLREPHGVTGH+VPWNYP+QIFGR VG ALAAGN CVVKPAEDACLSL Sbjct: 121 ETIPYQQGYTVLTLREPHGVTGHVVPWNYPLQIFGRSVGAALAAGNACVVKPAEDACLSL 180 Query: 181 LRVAELAAEAGFPEGALNIVTGYGHEAGDLLVKHPDVDHVSFTGSPNVGKLVVRAAAEHH 240 LRVAELAAE GFP GALNIVTGYGHEAGD L +HP +DH+SFTGSP VG LV + AAE H Sbjct: 181 LRVAELAAETGFPAGALNIVTGYGHEAGDALTRHPGIDHISFTGSPRVGVLVTQTAAERH 240 Query: 241 TPVTLELGGKSPQVVFEDADMDALLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLERL 300 PVTLELGGKSPQ+VF DAD+DAL+PV VNAIVQNAGQTCSAGSRLLV+RGAYE+VLERL Sbjct: 241 VPVTLELGGKSPQIVFADADLDALVPVAVNAIVQNAGQTCSAGSRLLVERGAYERVLERL 300 Query: 301 AGLFSQLKVGSSQMDLDCGPLIRKTQQERVAGFLSDARRDGIALVAQGEIAPEAPAGGFY 360 F+ L+ G +Q DLDCGPLIRKTQQERV GFL AR DGIA VAQG I PEAPA G+Y Sbjct: 301 GAAFAALRAGPAQSDLDCGPLIRKTQQERVRGFLDLARGDGIATVAQGRIVPEAPAEGYY 360 Query: 361 QTPALLRDVPPQHRLAQEEVFGPVLAAMSFEDEAEAIALANGTDYGLVASVWTRDGGRQM 420 Q P LLRDVP H LAQEEVFGPVLAA+ F+DEA+A+ +AN T+YGL ASVWTRDGGRQ+ Sbjct: 361 QAPTLLRDVPVDHPLAQEEVFGPVLAAIPFDDEADAVRIANATEYGLAASVWTRDGGRQL 420 Query: 421 RLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRH 476 R+AR +RSGQVFINNYGAGGG+ELPFGGVKASGHGREKGFEALYGFTVLKTI+I+H Sbjct: 421 RIARKVRSGQVFINNYGAGGGIELPFGGVKASGHGREKGFEALYGFTVLKTISIKH 476 >ref|YP_001628634.1| putative aldehyde dehydrogenase [Bordetella petrii DSM 12804] emb|CAP40363.1| putative aldehyde dehydrogenase [Bordetella petrii] Length = 478 Score = 724 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 360/477 (75%), Positives = 411/477 (86%), Gaps = 1/477 (0%) Query: 1 MKQHFIDNRWVAPASGESIPVIDPSDGQAFEAIARGNAADIDQAVQAARRAY-ESAWGKL 59 MKQHFIDNR V +SGESIPV+DPS GQ +++IARGNA DID AVQAARRAY E AWG+L Sbjct: 1 MKQHFIDNRAVPGSSGESIPVLDPSTGQQYDSIARGNATDIDLAVQAARRAYDEGAWGRL 60 Query: 60 SAAERSRLLMKLAHKLQDHQEELAQLEGRDCGKPMKQARADAAAIVRYFEFYAGAADKLH 119 +AAER RL++KL+ K+ D +EL +E RDCGKP KQARAD A+ RYFE+Y GAADKLH Sbjct: 61 TAAERGRLMLKLSVKILDCADELTDIESRDCGKPTKQARADVTAVARYFEYYGGAADKLH 120 Query: 120 GDTIPYQAGYTVLTLREPHGVTGHIVPWNYPMQIFGRCVGGALAAGNTCVVKPAEDACLS 179 G+T+PYQ GYTVLTLREPHGVTGH+VPWNYP+QIFGR VGGALAAGN CVVKPAEDACLS Sbjct: 121 GETLPYQNGYTVLTLREPHGVTGHVVPWNYPLQIFGRSVGGALAAGNACVVKPAEDACLS 180 Query: 180 LLRVAELAAEAGFPEGALNIVTGYGHEAGDLLVKHPDVDHVSFTGSPNVGKLVVRAAAEH 239 LLR+AELAAE GFP GA+NIVTGYGHEAGD L +HP +DH+SFTGSP +G LV + AAE Sbjct: 181 LLRLAELAAEVGFPPGAINIVTGYGHEAGDALTRHPGIDHISFTGSPRIGVLVTQVAAER 240 Query: 240 HTPVTLELGGKSPQVVFEDADMDALLPVVVNAIVQNAGQTCSAGSRLLVQRGAYEQVLER 299 H PVTLELGGKSPQ+VF DAD+DAL+PV VNAIVQNAGQTCSAGSRLLV+R AY++VLER Sbjct: 241 HVPVTLELGGKSPQIVFGDADLDALVPVAVNAIVQNAGQTCSAGSRLLVERSAYDRVLER 300 Query: 300 LAGLFSQLKVGSSQMDLDCGPLIRKTQQERVAGFLSDARRDGIALVAQGEIAPEAPAGGF 359 L+ FS L+ G + MDLDCGPLIRKTQQERV FL A +DGIA AQG+IA APA G+ Sbjct: 301 LSQAFSALRAGPATMDLDCGPLIRKTQQERVQNFLKAAAQDGIATAAQGKIADGAPAEGY 360 Query: 360 YQTPALLRDVPPQHRLAQEEVFGPVLAAMSFEDEAEAIALANGTDYGLVASVWTRDGGRQ 419 YQ P LL +VP HRLAQEEVFGPVLAA+ F+DEA+A+ +AN T+YGL ASVWTRDG RQ Sbjct: 361 YQAPTLLDNVPVDHRLAQEEVFGPVLAAIPFDDEADAVRIANATEYGLAASVWTRDGARQ 420 Query: 420 MRLARAIRSGQVFINNYGAGGGVELPFGGVKASGHGREKGFEALYGFTVLKTIAIRH 476 +R+AR +RSGQVFINNYGAGGG+ELPFGGVKASGHGREKGFEALYGFTVLKTI+I+H Sbjct: 421 LRIARKVRSGQVFINNYGAGGGIELPFGGVKASGHGREKGFEALYGFTVLKTISIKH 477