BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1637.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775658.1| branched-chain amino acid ABC transporter AT... 302 2e-80 ref|YP_003745667.1| branched-chain amino acid ABC transporter AT... 266 2e-69 ref|YP_001899023.1| ABC transporter-like protein [Ralstonia pick... 266 2e-69 emb|CBJ37964.1| putative ABC-type branched-chain amino acid tran... 266 3e-69 ref|YP_002981450.1| ABC transporter-like protein [Ralstonia pick... 265 4e-69 >ref|YP_003775658.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63750.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 169/238 (71%), Positives = 196/238 (82%) Query: 12 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 71 MDK+S LL + GLQA YG S VLHGV L V RGEIVSILGRNGAGRSTLLKA+MG + S Sbjct: 1 MDKTSLLLSVTGLQAGYGHSRVLHGVDLTVQRGEIVSILGRNGAGRSTLLKALMGLLPSR 60 Query: 72 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPVPDDGWREEE 131 G+ FE R ++GL T+AIA+ G+GYVPESR+VFP L+V QNLLLGRK GP P GW E++ Sbjct: 61 GDCRFEGRDISGLPTHAIARLGMGYVPESREVFPTLSVAQNLLLGRKPGPQPGRGWCEDD 120 Query: 132 VLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAHY 191 + LFP+L +R +VAA ALSGGEQQMLALGRAL+GNP LLL+DEPTEGL+PQMV QVA Sbjct: 121 IHALFPALYKRRQVAAAALSGGEQQMLALGRALLGNPSLLLVDEPTEGLAPQMVEQVARA 180 Query: 192 LELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWLAL 249 L+ LR R VAVLL+EQKQALALELSQRVYVMGRGEMVF GTP L+A + +Q+EWLAL Sbjct: 181 LQELRTRGVAVLLVEQKQALALELSQRVYVMGRGEMVFEGTPTGLSAQETVQREWLAL 238 >ref|YP_003745667.1| branched-chain amino acid ABC transporter ATP-binding protein [Ralstonia solanacearum CFBP2957] emb|CBJ43052.1| putative ABC-type branched-chain amino acid transporter, ATP_binding component [Ralstonia solanacearum CFBP2957] Length = 239 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 135/237 (56%), Positives = 175/237 (73%), Gaps = 1/237 (0%) Query: 12 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 71 M ++ LL + GL A+YG+SH+LHGV L V GEIV++LGRNG GRSTL K++MG VR Sbjct: 1 MATTTPLLEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRCE 60 Query: 72 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGP-VPDDGWREE 130 G I + + GL T+ +A RG+GYVPE+RD+FP LTV+QNLLLG K P P WR + Sbjct: 61 GHILLRGQDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNPRQPRPRWRLD 120 Query: 131 EVLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAH 190 ++ LFP L+ R AG LSGGEQQML L R LMG+P ++IDEPTEGL+P +V QV Sbjct: 121 DMYRLFPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVTQVGD 180 Query: 191 YLELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 247 YL++L+ R V+VLL+EQK A+AL++SQRVYVMG G++VF GTPA L AD +++EWL Sbjct: 181 YLKMLKARGVSVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADAQVRREWL 237 >ref|YP_001899023.1| ABC transporter-like protein [Ralstonia pickettii 12J] gb|ACD26591.1| ABC transporter related [Ralstonia pickettii 12J] Length = 239 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 131/237 (55%), Positives = 177/237 (74%), Gaps = 1/237 (0%) Query: 12 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 71 M ++ +L + L A+YG+SH+LHGV + V GEIV++LGRNG GRSTL K++MG VR Sbjct: 1 MATNTPMLEVRDLHAYYGKSHILHGVDMHVGEGEIVALLGRNGVGRSTLAKSIMGMVRHE 60 Query: 72 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGPV-PDDGWREE 130 GEI ++++GL T+ +A +G+GYVPE+RD+FP LTV+QNLLLG K P P W+ E Sbjct: 61 GEILLRGKNVSGLRTFEVAHKGIGYVPENRDIFPTLTVRQNLLLGEKRNPSQPKPRWQVE 120 Query: 131 EVLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAH 190 ++ +FP L+ R AAG LSGGEQQML L R LMG+P ++IDEPTEGL+P +V V Sbjct: 121 DMYQMFPRLKERENTAAGVLSGGEQQMLTLCRTLMGDPDFIIIDEPTEGLAPLVVTLVGE 180 Query: 191 YLELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 247 YL+ L++R ++VLL+EQK A+AL++SQRVYVMG G++VF GTP QL AD ++QEWL Sbjct: 181 YLKTLKERGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPQQLKADAKVRQEWL 237 >emb|CBJ37964.1| putative ABC-type branched-chain amino acid transporter, ATP_binding component [Ralstonia solanacearum CMR15] Length = 239 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 134/237 (56%), Positives = 173/237 (72%), Gaps = 1/237 (0%) Query: 12 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 71 M ++ +L + GL A+YG+SH+LHGV L V GEIV++LGRNG GRSTL K++MG VR Sbjct: 1 MAATTPMLDVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRCE 60 Query: 72 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGP-VPDDGWREE 130 G I + GL T+ +A RG+GYVPE+RD+FP LTV+QNLLLG K P P W+ + Sbjct: 61 GHILLRGTDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNPHQPKPRWQLD 120 Query: 131 EVLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAH 190 ++ LFP L+ R AG LSGGEQQML L R LMG+P ++IDEPTEGL+P +V QV Sbjct: 121 DMYRLFPRLKERENTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVAQVGE 180 Query: 191 YLELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 247 YL+ L+ R ++VLLIEQK A+AL++SQRVYVMG G++VF GTPA L AD ++QEWL Sbjct: 181 YLKTLKARGISVLLIEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEWL 237 >ref|YP_002981450.1| ABC transporter-like protein [Ralstonia pickettii 12D] gb|ACS62778.1| ABC transporter related [Ralstonia pickettii 12D] Length = 239 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 131/237 (55%), Positives = 177/237 (74%), Gaps = 1/237 (0%) Query: 12 MDKSSALLRIAGLQAWYGQSHVLHGVSLEVARGEIVSILGRNGAGRSTLLKAVMGQVRST 71 M ++ +L + L A+YG+SH+LHGV + V GEIV++LGRNG GRSTL K++MG VR Sbjct: 1 MATNTPMLEVRDLHAYYGKSHILHGVDMHVGEGEIVALLGRNGVGRSTLAKSIMGMVRHE 60 Query: 72 GEIDFEDRSLAGLATYAIAQRGVGYVPESRDVFPALTVQQNLLLGRKSGP-VPDDGWREE 130 GEI ++++GL T+ +A +G+GYVPE+RD+FP LTV+QNLLLG K P P W+ E Sbjct: 61 GEILLRGKNVSGLRTFEVAHKGIGYVPENRDIFPTLTVRQNLLLGEKRNPGQPKPRWQVE 120 Query: 131 EVLTLFPSLERRYKVAAGALSGGEQQMLALGRALMGNPRLLLIDEPTEGLSPQMVGQVAH 190 ++ +FP L+ R AAG LSGGEQQML L R LMG+P ++IDEPTEGL+P +V V Sbjct: 121 DMYQMFPRLKERENTAAGVLSGGEQQMLTLCRTLMGDPDFIIIDEPTEGLAPLVVTLVGE 180 Query: 191 YLELLRQRQVAVLLIEQKQALALELSQRVYVMGRGEMVFHGTPAQLAADQALQQEWL 247 YL+ L++R ++VLL+EQK A+AL++SQRVYVMG G++VF GTP QL AD ++QEWL Sbjct: 181 YLKTLKERGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPQQLKADAKVRQEWL 237