BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1633.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775653.1| peptide methionine sulfoxide reductase [Herb...   269   1e-70
ref|YP_004753050.1| methionine sulfoxide reductase [Collimonas f...   231   4e-59
ref|YP_001353237.1| peptide methionine sulfoxide reductase [Jant...   227   6e-58
ref|ZP_08272912.1| Peptide methionine sulfoxide reductase MsrB [...   221   2e-56
ref|YP_001100017.1| methionine sulfoxide reductase [Herminiimona...   219   1e-55

>ref|YP_003775653.1| peptide methionine sulfoxide reductase [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63745.1| peptide methionine sulfoxide reductase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 131

 Score =  269 bits (687), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 129/131 (98%), Positives = 130/131 (99%)

Query: 1   MNKRVEKTEAQWREQLDPMEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60
           M KRVEKTEAQWREQLDP+EYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA
Sbjct: 1   MTKRVEKTEAQWREQLDPLEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60

Query: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|YP_004753050.1| methionine sulfoxide reductase [Collimonas fungivorans Ter331]
 gb|AEK62227.1| methionine sulfoxide reductase [Collimonas fungivorans Ter331]
          Length = 132

 Score =  231 bits (588), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 104/131 (79%), Positives = 120/131 (91%)

Query: 1   MNKRVEKTEAQWREQLDPMEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60
           M+ +V KT+A+WR +L+PMEY+VTR AATERAFTG++WDHHE G YTCVCC+TPLF SDA
Sbjct: 1   MSSKVIKTDAEWRSELEPMEYEVTRHAATERAFTGKFWDHHEHGVYTCVCCNTPLFESDA 60

Query: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF+ I+P NV E+VDRS+GM+RTEI+C VCDAHLGHVFPDGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFKAINPDNVEERVDRSHGMMRTEILCKVCDAHLGHVFPDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|YP_001353237.1| peptide methionine sulfoxide reductase [Janthinobacterium sp.
           Marseille]
 gb|ABR88604.1| peptide methionine sulfoxide reductase [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score =  227 bits (578), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 104/131 (79%), Positives = 115/131 (87%)

Query: 1   MNKRVEKTEAQWREQLDPMEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60
           M  +V KT+A+WR  LD  EY VTR AATE  FTGRYWDHHE G YTCVCC+TPLF SD 
Sbjct: 1   MIDKVIKTDAEWRAMLDDEEYDVTRHAATEAPFTGRYWDHHEFGIYTCVCCNTPLFASDT 60

Query: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF+P++PANV+EK+DR+YGMIRTE+ICNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFKPLNPANVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|ZP_08272912.1| Peptide methionine sulfoxide reductase MsrB [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF33615.1| Peptide methionine sulfoxide reductase MsrB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 143

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 102/131 (77%), Positives = 112/131 (85%)

Query: 1   MNKRVEKTEAQWREQLDPMEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60
           M  +V KT+A+WR  LDPM+Y+VTR AATERAFTGRYWDHHE G YTCVCC+TPLF SD 
Sbjct: 4   MTNKVTKTDAEWRAALDPMDYEVTRHAATERAFTGRYWDHHEHGIYTCVCCNTPLFASDT 63

Query: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF  ++P NV+E VDRS+GM RTEIIC VCDAHLGHVFPDGP PTGLRYC
Sbjct: 64  KFDSGCGWPSYFTALNPDNVKELVDRSHGMARTEIICAVCDAHLGHVFPDGPKPTGLRYC 123

Query: 121 INSASLRFDPA 131
           INSASL F PA
Sbjct: 124 INSASLSFAPA 134


>ref|YP_001100017.1| methionine sulfoxide reductase [Herminiimonas arsenicoxydans]
 sp|A4G5V5|MSRB_HERAR RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
           Full=Peptide-methionine (R)-S-oxide reductase
 emb|CAL61892.1| Peptide methionine sulfoxide reductase MsrB (Peptide-methionine
           (R)-S-oxide reductase) [Herminiimonas arsenicoxydans]
          Length = 137

 Score =  219 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/129 (77%), Positives = 112/129 (86%)

Query: 1   MNKRVEKTEAQWREQLDPMEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60
           M ++V KT+A+WR  LD  EY VTR AATE  F+GRYWDHHE G YTCVCC+TPLF SDA
Sbjct: 1   MTEKVIKTDAEWRAMLDDEEYDVTRHAATEAPFSGRYWDHHEHGIYTCVCCNTPLFASDA 60

Query: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF  ++P NV+EK+DR+YGMIRTE+ICNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFTALNPDNVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFD 129
           INSASLRFD
Sbjct: 121 INSASLRFD 129