BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1625.p (522 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775646.1| hypothetical protein Hsero_2239 [Herbaspiril... 809 0.0 ref|YP_001100026.1| putative sugar kinase [Herminiimonas arsenic... 494 e-137 ref|YP_001353229.1| hypothetical protein mma_1539 [Janthinobacte... 478 e-132 ref|ZP_04576074.1| conserved hypothetical protein [Oxalobacter f... 457 e-126 ref|ZP_04578264.1| conserved hypothetical protein [Oxalobacter f... 448 e-123 >ref|YP_003775646.1| hypothetical protein Hsero_2239 [Herbaspirillum seropedicae SmR1] gb|ADJ63738.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 522 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 461/522 (88%), Positives = 485/522 (92%) Query: 1 MSALHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGN 60 MSALH+VAEIR++EQ AL+ALPPYTLMQRAGAAIAE AQQ+LCS+TASSPSVLVLAGPGN Sbjct: 1 MSALHTVAEIRRIEQEALAALPPYTLMQRAGAAIAELAQQMLCSSTASSPSVLVLAGPGN 60 Query: 61 NGGDALEAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRAR 120 NGGDALEAACLLEEAGIEV+VQLHADESRQP DARRALARAREAE++FIE GD LR + Sbjct: 61 NGGDALEAACLLEEAGIEVTVQLHADESRQPPDARRALARAREAEIQFIEDHGDALLRQQ 120 Query: 121 SWALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVA 180 +WALVIDGLFGIGL RPPGP LR II+YINSLRCPVLSIDVPSGL+ADTGSIVGGR+G A Sbjct: 121 AWALVIDGLFGIGLARPPGPRLRLIIDYINSLRCPVLSIDVPSGLDADTGSIVGGRDGAA 180 Query: 181 VQATHTLSFIGDKPGLHTCDGSDHSGQIVVDALEIDAALLPPARAFLNGPQSFATALKPR 240 VQATHTL+FIGDKPGLHTCDGSDHSGQIVVD LEI A P RAFLNGPQSFATALKPR Sbjct: 181 VQATHTLTFIGDKPGLHTCDGSDHSGQIVVDTLEIAAERFLPTRAFLNGPQSFATALKPR 240 Query: 241 ANNSHKGSYGDVIVVGGARGMAGAPMMVARTAAFCGAGRVYVAFVDDGLAYDDKHPELMF 300 ANNSHKGSYGDVIVVGGARGMAGAP++ ARTAAF GAGRVYVAFVDDGLAYDDKHPELMF Sbjct: 241 ANNSHKGSYGDVIVVGGARGMAGAPVLAARTAAFGGAGRVYVAFVDDGLAYDDKHPELMF 300 Query: 301 RLADRVEFGASAALVIGPGLGTSRHAHDILARALDSEADIVVDADALNLISAEPTLQHKL 360 RLADRVEF ASAALV+GPG+GTSRHAHDILARALDSEA+IVVDADALNLISAEP LQHKL Sbjct: 301 RLADRVEFAASAALVVGPGMGTSRHAHDILARALDSEAEIVVDADALNLISAEPALQHKL 360 Query: 361 HSRSHTGAAITSIITPHPLEAARLLDSTTQQIQQDRPQAARLLARQFNAITVLKGAGTVI 420 H RS GAA +IITPHPLEAARLLDSTTQQ+QQDRP AAR LARQFNAITVLKGAGTVI Sbjct: 361 HRRSQAGAAAKTIITPHPLEAARLLDSTTQQVQQDRPHAARQLARQFNAITVLKGAGTVI 420 Query: 421 AFPDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPTRAAALAATWIHGAAADQLVA 480 AFPDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWP RAAALAATWIHGAAADQLVA Sbjct: 421 AFPDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPARAAALAATWIHGAAADQLVA 480 Query: 481 AGQGPVGLTASEFIPAIRAVFNQILRDHVQRRPALHPHRPQP 522 +G GPVGLTASEFIPAIRAVFNQI+RDHVQRRP HRP P Sbjct: 481 SGLGPVGLTASEFIPAIRAVFNQIIRDHVQRRPVATAHRPHP 522 >ref|YP_001100026.1| putative sugar kinase [Herminiimonas arsenicoxydans] emb|CAL61901.1| Conserved hypothetical protein, putative carbohydrate kinase [Herminiimonas arsenicoxydans] Length = 514 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 296/509 (58%), Positives = 366/509 (71%), Gaps = 12/509 (2%) Query: 3 ALHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNG 62 AL+ VAEIRQ+EQAA +ALP Y LMQRAG A AE +QLLC+ +VL L GPGNNG Sbjct: 7 ALYKVAEIRQIEQAAHAALPHYFLMQRAGTAAAEYVRQLLCN--HHDVAVLALVGPGNNG 64 Query: 63 GDALEAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSW 122 GDALEAA L G++VS+ L D ++ PADA++AL A+ + FI+ + + A +W Sbjct: 65 GDALEAASQLAHYGLQVSIHLTGDPAQLPADAQQALQHAQGSPATFIDRSA---IGANAW 121 Query: 123 ALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQ 182 LVIDGLFGIGL R + +I+ INSL C VL++DVPSGLNAD+G+IVGG G ++ Sbjct: 122 TLVIDGLFGIGLARAITGEISDLIKQINSLHCHVLALDVPSGLNADSGTIVGGSSGSIIR 181 Query: 183 ATHTLSFIGDKPGLHTCDGSDHSGQIVVDALEIDAALLPPARAFLNGPQSFATALKPRAN 242 ATHT++FIGDKPGLHTCDG D++G+++V L ID L PPA LN F+ L+PR + Sbjct: 182 ATHTITFIGDKPGLHTCDGRDYAGEVLVSDLAIDPQLFPPASMQLNHVALFSAELQPRRH 241 Query: 243 NSHKGSYGDVIVVGGARGMAGAPMMVARTAAFCGAGRVYVAFVDDGLAYDDKHPELMFRL 302 NSHKGSYGDV V+GGA GM GA +M ARTAA CGAGRV+VA + + AYD PELM RL Sbjct: 242 NSHKGSYGDVSVLGGAHGMVGAAVMAARTAANCGAGRVFVACISEAPAYDSVQPELMCRL 301 Query: 303 ADRVEFGASAALVIGPGLGTSRHAHDILARALDSEADIVVDADALNLISAEPTLQHKLHS 362 A ++F S +V GPGLG SR AHD L +AL + +V+DADALNL+S E LQ +L + Sbjct: 302 AAHIDFD-STTIVAGPGLGDSRTAHDFLVKALATHTPLVLDADALNLVSMEAGLQQRLAA 360 Query: 363 RSHTGAAITSIITPHPLEAARLLDSTTQQIQQDRPQAARLLARQFNAITVLKGAGTVIAF 422 R +++TPHPLEAARLL T QQ+Q DR AA LA +FNA +LKG+GT+IA Sbjct: 361 RE-----APALMTPHPLEAARLLGITVQQVQADRIAAAHALAARFNATAILKGSGTIIAA 415 Query: 423 PDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPTRAAALAATWIHGAAADQLVAAG 482 P G I +NP+GNPAL+TAG+GDVLSGLCGALLAQGWP AALAA W+HG AAD LV G Sbjct: 416 PSGIIVVNPTGNPALATAGSGDVLSGLCGALLAQGWPVWEAALAAVWLHGKAADNLVQDG 475 Query: 483 QGPVGLTASEFIPAIRAVFNQ-ILRDHVQ 510 GP+GLTASE IPAIRAV NQ +L+ H + Sbjct: 476 IGPIGLTASELIPAIRAVLNQLVLQQHTR 504 >ref|YP_001353229.1| hypothetical protein mma_1539 [Janthinobacterium sp. Marseille] gb|ABR88888.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 502 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 283/503 (56%), Positives = 362/503 (71%), Gaps = 8/503 (1%) Query: 3 ALHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGNNG 62 AL++VAEIR++EQAAL+ P Y LMQRAG A E A QLL S+ VLVLAGPGNNG Sbjct: 6 ALYTVAEIREIEQAALANSPSYALMQRAGTAAGELAYQLLQSSDKER-RVLVLAGPGNNG 64 Query: 63 GDALEAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEGTGDVPLRARSW 122 GDALEAA L AG++VS+ + P DA++AL RA+ ++ FI + + W Sbjct: 65 GDALEAASQLMNAGLKVSIIMPLGADGLPPDAQQALKRAKASKANFITDS-TAAIGNTDW 123 Query: 123 ALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGREGVAVQ 182 ALVIDGLFGIGL+R + +I +N L CP+L++DVPSGLNADTG+IVG EG+A+Q Sbjct: 124 ALVIDGLFGIGLSRAINGPVGELIASVNQLSCPILALDVPSGLNADTGAIVGDAEGIAIQ 183 Query: 183 ATHTLSFIGDKPGLHTCDGSDHSGQIVVDALEIDAALLPPARAFLNGPQSFATALKPRAN 242 ATHT++FIG+K GLHTC+G DH+G + + L+I A PP+ LN P+ FA+ L+PR + Sbjct: 184 ATHTITFIGNKAGLHTCEGRDHAGIVSLATLDIAAERFPPSHMQLNRPELFASCLRPRRH 243 Query: 243 NSHKGSYGDVIVVGGARGMAGAPMMVARTAAFCGAGRVYVAFVDDGLAYDDKHPELMFRL 302 N+HKGSYGDV V+GG+ GM GA ++ AR AA CGAGRV++A + D L YD ELM RL Sbjct: 244 NTHKGSYGDVSVLGGSHGMVGAAVLAARAAAKCGAGRVFIACLADSLLYDSMQAELMSRL 303 Query: 303 ADRVEFGASAALVIGPGLGTSRHAHDILARALDSEADIVVDADALNLISAEPTLQHKLHS 362 A +++ ++ V GPGLGTSR A D+L +A+ + +V+DADALNLI +EP LQ K+ + Sbjct: 304 ASNIDY-STTTTVAGPGLGTSRLARDLLGKAMTANTPLVIDADALNLIGSEPALQEKMLA 362 Query: 363 RSHTGAAITSIITPHPLEAARLLDSTTQQIQQDRPQAARLLARQFNAITVLKGAGTVIAF 422 RS +IITPHPLEAARLL STTQQIQ +R AAR LA F A T+LKG+GTVIA Sbjct: 363 RS-----AATIITPHPLEAARLLASTTQQIQGNRIAAARALAGTFRATTILKGSGTVIAA 417 Query: 423 PDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPTRAAALAATWIHGAAADQLVAAG 482 PDG + +N +GNPAL+TAG+GDVL+GL GALLAQG P AALAA ++HG AAD+LV G Sbjct: 418 PDGTVVLNTTGNPALATAGSGDVLAGLSGALLAQGCPEWEAALAAVYLHGLAADELVRRG 477 Query: 483 QGPVGLTASEFIPAIRAVFNQIL 505 GP+GLTA E IP IR+V NQ++ Sbjct: 478 IGPIGLTAGELIPEIRSVLNQLV 500 >ref|ZP_04576074.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO27036.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 520 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 255/510 (50%), Positives = 340/510 (66%), Gaps = 12/510 (2%) Query: 1 MSALHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGN 60 M+AL+S+ IR +E+AAL+ LP TLMQRAG A+ A LL S+T VLVLAGPGN Sbjct: 15 MNALYSINAIRTIERAALADLPTGTLMQRAGREAAKLAMSLLSSSTQIKKEVLVLAGPGN 74 Query: 61 NGGDALEAACLLEEAGIEVSVQLHADESR-QPADARRALARAREAELEFIEG----TGDV 115 NGGDALE A LL ++GI VSV L ++ + QP +AR+A +A ++ + + + T Sbjct: 75 NGGDALEMAVLLADSGISVSVLLVSNRKKNQPEEARQARQKAVKSAIHWEDALSLQTTFE 134 Query: 116 PLRARSWALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGG 175 L+ R+WALV+DG+FGIGL ++ +NS +CP+L++DVPSGLNADTG++VG Sbjct: 135 SLKRRNWALVVDGMFGIGLKEALTGNRNKLVRIVNSFQCPILALDVPSGLNADTGNVVGN 194 Query: 176 REGVAVQATHTLSFIGDKPGLHTCDGSDHSGQIVVDALEIDAALLPPARAFLNGPQSFAT 235 + +AV+ATHTL+FI DKPGLHT G DH+G++ V +L++D P +LN P+ F Sbjct: 195 -DSIAVRATHTLTFIADKPGLHTGKGRDHAGEVHVASLDVDKKYFPATDCWLNTPELFGH 253 Query: 236 ALKPRANNSHKGSYGDVIVVGGARGMAGAPMMVARTAAFCGAGRVYVAFVDDGLAYDDKH 295 LKPR +++HKGSYG + ++GGA GM GAP++ AR A + GAG Y ++ + +YD Sbjct: 254 FLKPRLHDTHKGSYGRIAILGGAEGMGGAPVLAARAALYTGAGLAYAVYLKNPPSYDPVS 313 Query: 296 PELMFRLADRVEFGASAALVIGPGLGTSRHAHDILARALDSEADIVVDADALNLISAEPT 355 PE+MFR A R +F A VIGPGLG S A + LAR + S V DADALN++S P Sbjct: 314 PEVMFRAAHRFDFSADVT-VIGPGLGQSPVAGNYLARTIASGKPAVFDADALNILSENPA 372 Query: 356 LQHKLHSRSHTGAAITSIITPHPLEAARLLDSTTQQIQQDRPQAARLLARQFNAITVLKG 415 LQ R+ S++TPHPLEAARLL + +Q DR A R LA QFNA+ VLKG Sbjct: 373 LQFSFSERN-----APSVMTPHPLEAARLLGRDSAFVQSDRLNAGRTLAEQFNAVIVLKG 427 Query: 416 AGTVIAFPDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPTRAAALAATWIHGAAA 475 +GT++ PDG+ INP+GNP L+TAGTGDVLSG+ GAL+AQGWP AALAA W+HG AA Sbjct: 428 SGTLVCSPDGKTVINPTGNPGLATAGTGDVLSGMTGALMAQGWPAWEAALAAVWLHGKAA 487 Query: 476 DQLVAAGQGPVGLTASEFIPAIRAVFNQIL 505 D L G VG+TA E P R + N+++ Sbjct: 488 DVLEKERHGCVGITAGEIAPKARFLLNELI 517 >ref|ZP_04578264.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO29237.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 506 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 247/510 (48%), Positives = 340/510 (66%), Gaps = 11/510 (2%) Query: 1 MSALHSVAEIRQVEQAALSALPPYTLMQRAGAAIAEQAQQLLCSTTASSPSVLVLAGPGN 60 M+AL+S+ IR +E++AL+ LP TLMQRAG+ A A +L + + VLVLAGPGN Sbjct: 1 MNALYSIDAIRTIERSALADLPKGTLMQRAGSEAASLAMHMLAKSADTKKEVLVLAGPGN 60 Query: 61 NGGDALEAACLLEEAGIEVSVQLHADESRQPADARRALARAREAELEFIEG----TGDVP 116 NGGDALE A +L G+ VSV L A+ +Q +A A +A ++ + + + T Sbjct: 61 NGGDALEMATILANDGVAVSVLLVANRKKQSEEAILARKKAVKSPVHWEDALSLKTTLES 120 Query: 117 LRARSWALVIDGLFGIGLTRPPGPALRPIIEYINSLRCPVLSIDVPSGLNADTGSIVGGR 176 +R++ WALV+DG+FGIGL + ++E +N+ +CP+L++DVPSGLNA+TG+IVG + Sbjct: 121 IRSKKWALVVDGMFGIGLKEALTGNRQKLVEIVNTFKCPILALDVPSGLNANTGNIVG-K 179 Query: 177 EGVAVQATHTLSFIGDKPGLHTCDGSDHSGQIVVDALEIDAALLPPARAFLNGPQSFATA 236 E +AV AT T++FI DKPGLHT G D +G++ V L++D P R +LN P F + Sbjct: 180 EEIAVHATDTITFIADKPGLHTRKGRDCAGRVHVVTLDVDRKYFPETRCWLNSPDLFESC 239 Query: 237 LKPRANNSHKGSYGDVIVVGGARGMAGAPMMVARTAAFCGAGRVYVAFVDDGLAYDDKHP 296 LKPR +SHKGSYG + +VGG +GM+GAP++ A+ A F GAG Y ++ + AYD P Sbjct: 240 LKPRPEDSHKGSYGRIAIVGGTQGMSGAPVLAAKAALFSGAGLCYAIYLKNPPAYDPVSP 299 Query: 297 ELMFRLADRVEFGASAALVIGPGLGTSRHAHDILARALDSEADIVVDADALNLISAEPTL 356 E+MFR A + +F A+ +V GPGLG S A DI+ + +++ IV+DADALN++S + Sbjct: 300 EIMFRAAHQFDF-ATDVIVTGPGLGKSGAARDIVIKTIEAHTPIVLDADALNILSENGAI 358 Query: 357 QHKLHSRSHTGAAITSIITPHPLEAARLLDSTTQQIQQDRPQAARLLARQFNAITVLKGA 416 L R +IITPHPLEAARLL +T+ IQ +R +AAR LAR+F A+ VLKG+ Sbjct: 359 AQMLSERDSP-----TIITPHPLEAARLLKTTSDVIQANRLEAARELARRFKAVAVLKGS 413 Query: 417 GTVIAFPDGEIAINPSGNPALSTAGTGDVLSGLCGALLAQGWPTRAAALAATWIHGAAAD 476 GTVIA PDG+ INP+GNPAL+TAGTGDVLSG+ GAL+AQGWP A LAA W+HG AAD Sbjct: 414 GTVIASPDGKTVINPTGNPALATAGTGDVLSGITGALIAQGWPAWEATLAAVWLHGKAAD 473 Query: 477 QLVAAGQGPVGLTASEFIPAIRAVFNQILR 506 L GP+G A E P +R N +++ Sbjct: 474 TLALRRHGPIGTVAGELAPEVRLQLNLLVK 503