BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1621.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775642.1| glutamine amidotransferase [Herbaspirillum s... 462 e-128 ref|ZP_06687473.1| glutamine amidotransferase [Achromobacter pie... 250 1e-64 ref|YP_003978858.1| glutamine amidotransferase class-I family pr... 248 5e-64 gb|EFV86492.1| hypothetical protein HMPREF0005_03726 [Achromobac... 246 3e-63 gb|EGP44097.1| glutamine amidotransferase [Achromobacter xylosox... 243 2e-62 >ref|YP_003775642.1| glutamine amidotransferase [Herbaspirillum seropedicae SmR1] gb|ADJ63734.1| glutamine amidotransferase protein [Herbaspirillum seropedicae SmR1] Length = 239 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 222/239 (92%), Positives = 230/239 (96%) Query: 1 MPAPVLIIQTGDANPALKTNYGGYADQIGCAAGLCHTEIEVVTVYEGQRPSCPRSYRAVF 60 MPAPVLIIQTGDANP LK +YGGYA QIGCAAGLC +E++VVTVYEGQRPSCPRSYRAVF Sbjct: 1 MPAPVLIIQTGDANPTLKDSYGGYAQQIGCAAGLCQSELQVVTVYEGQRPSCPRSYRAVF 60 Query: 61 ITGSPAMVTDKEDWSERTAEWIRDAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAG 120 ITGSPAMVTDKEDWSERTAEW+R+AAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAG Sbjct: 61 ITGSPAMVTDKEDWSERTAEWLREAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAG 120 Query: 121 TMHVKTLECCRQDELLGVLPSEFPAHMLHMQSVLRPPKDAIVMARSPMDPHHVIKHKHNV 180 TMHVKTLECCR+DELLGVLP EFPAHMLHMQSVLRPP DAIVMARSPMDPHHVIKHKHNV Sbjct: 121 TMHVKTLECCREDELLGVLPPEFPAHMLHMQSVLRPPPDAIVMARSPMDPHHVIKHKHNV 180 Query: 181 YSTQFHPEFSPEFVRAHLHYYTDIYRGCGIDAQALCEKVCDTPQSTGLLRRFLELYARH 239 YSTQFHPEFSPEFVRAHLHYY DIYRGCGIDAQALCEKV DTPQSTGLLRRFL L+ARH Sbjct: 181 YSTQFHPEFSPEFVRAHLHYYADIYRGCGIDAQALCEKVSDTPQSTGLLRRFLALHARH 239 >ref|ZP_06687473.1| glutamine amidotransferase [Achromobacter piechaudii ATCC 43553] gb|EFF75573.1| glutamine amidotransferase [Achromobacter piechaudii ATCC 43553] Length = 245 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 132/234 (56%), Positives = 160/234 (68%) Query: 4 PVLIIQTGDANPALKTNYGGYADQIGCAAGLCHTEIEVVTVYEGQRPSCPRSYRAVFITG 63 PVLI+ TGD LK+ +GGYA+Q+ AAGL + +V V+EGQRP P YRA ITG Sbjct: 10 PVLILHTGDPEDTLKSQFGGYAEQLTQAAGLTADAVRIVAVHEGQRPESPAHYRAALITG 69 Query: 64 SPAMVTDKEDWSERTAEWIRDAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAGTMH 123 SPAMVTDKE WSE TA W+R+AA PMFG+CYGHQLL HA GG+VGYNPAGR GT Sbjct: 70 SPAMVTDKEPWSEDTAAWLREAAAAQLPMFGVCYGHQLLAHALGGKVGYNPAGREVGTQT 129 Query: 124 VKTLECCRQDELLGVLPSEFPAHMLHMQSVLRPPKDAIVMARSPMDPHHVIKHKHNVYST 183 V+ L D+LL LP FPA MLH Q+VL+PP + V+ARS +D H +I+ NV+ST Sbjct: 130 VELLPPASGDKLLAGLPGTFPAQMLHAQTVLQPPPGSAVLARSDLDEHQMIRIGRNVFST 189 Query: 184 QFHPEFSPEFVRAHLHYYTDIYRGCGIDAQALCEKVCDTPQSTGLLRRFLELYA 237 QFHPEF P+F+RAHL Y+ Y +D L V TP + GLLRRFL+ YA Sbjct: 190 QFHPEFGPDFIRAHLDRYSRRYAAENLDIPDLTANVRATPVAGGLLRRFLDTYA 243 >ref|YP_003978858.1| glutamine amidotransferase class-I family protein 1 [Achromobacter xylosoxidans A8] gb|ADP16143.1| glutamine amidotransferase class-I family protein 1 [Achromobacter xylosoxidans A8] Length = 245 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 131/234 (55%), Positives = 161/234 (68%) Query: 4 PVLIIQTGDANPALKTNYGGYADQIGCAAGLCHTEIEVVTVYEGQRPSCPRSYRAVFITG 63 PVLI+ TGD + LK+ +GGYA+Q+ AAGL +E+V V+EG+RP P YRA ITG Sbjct: 10 PVLILHTGDPDDTLKSQFGGYAEQLAQAAGLSAEAMEIVPVHEGKRPQAPARYRAALITG 69 Query: 64 SPAMVTDKEDWSERTAEWIRDAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAGTMH 123 SPAMVTDKE WSE TA W+R+AA PMFG+CYGHQLL +A GG+VGYNPAGR GT Sbjct: 70 SPAMVTDKEPWSEDTAAWLREAAAAGLPMFGVCYGHQLLAYALGGKVGYNPAGREVGTQT 129 Query: 124 VKTLECCRQDELLGVLPSEFPAHMLHMQSVLRPPKDAIVMARSPMDPHHVIKHKHNVYST 183 V+ L D+LL LP FPA MLH Q+VL+PP A V+ARS +D H +I+ NV+ST Sbjct: 130 VELLPPAAGDKLLAGLPPTFPAQMLHAQTVLQPPPGAAVLARSDLDEHQMIRIGRNVFST 189 Query: 184 QFHPEFSPEFVRAHLHYYTDIYRGCGIDAQALCEKVCDTPQSTGLLRRFLELYA 237 QFHPEF P+F+RAHL + Y +D L V TP + GLLRRFL+ YA Sbjct: 190 QFHPEFGPDFIRAHLERFGRRYAAENLDVPGLSANVRATPVAGGLLRRFLDAYA 243 >gb|EFV86492.1| hypothetical protein HMPREF0005_03726 [Achromobacter xylosoxidans C54] Length = 245 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 131/234 (55%), Positives = 159/234 (67%) Query: 4 PVLIIQTGDANPALKTNYGGYADQIGCAAGLCHTEIEVVTVYEGQRPSCPRSYRAVFITG 63 PVLI+ TGD + LK+ +GGYA+Q+ A+GL ++EVV V+ GQRP P YRA ITG Sbjct: 10 PVLILHTGDPDDTLKSQFGGYAEQLARASGLAPDDLEVVAVHAGQRPRAPDQYRAALITG 69 Query: 64 SPAMVTDKEDWSERTAEWIRDAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAGTMH 123 SPAMVTD E WSE TA W+R+AA PMFGICYGHQLL HA GG+VGYNPAGR GT Sbjct: 70 SPAMVTDLEPWSEDTAAWLREAAAAGLPMFGICYGHQLLAHAMGGKVGYNPAGREVGTQT 129 Query: 124 VKTLECCRQDELLGVLPSEFPAHMLHMQSVLRPPKDAIVMARSPMDPHHVIKHKHNVYST 183 V+ L D+LL LP FPA MLH Q+VL+PP A V+ARS +D H +I+ N++ST Sbjct: 130 VELLPAAAGDKLLAGLPPTFPAQMLHAQTVLQPPPGAAVLARSDLDAHQMIRIGRNIFST 189 Query: 184 QFHPEFSPEFVRAHLHYYTDIYRGCGIDAQALCEKVCDTPQSTGLLRRFLELYA 237 QFHPEF P+FVRAHL + Y +D L V TP S L+RRFL+ YA Sbjct: 190 QFHPEFGPDFVRAHLERFGRRYAAENLDVPGLSANVRATPVSGDLVRRFLDAYA 243 >gb|EGP44097.1| glutamine amidotransferase [Achromobacter xylosoxidans AXX-A] Length = 245 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 129/234 (55%), Positives = 157/234 (67%) Query: 4 PVLIIQTGDANPALKTNYGGYADQIGCAAGLCHTEIEVVTVYEGQRPSCPRSYRAVFITG 63 PVLI+ TGD + LK+ +GGYA+Q+ A+GL +EVV V+ G+RP P YRA ITG Sbjct: 10 PVLILHTGDPDDTLKSQFGGYAEQLARASGLTPDALEVVAVHAGERPRAPDQYRAALITG 69 Query: 64 SPAMVTDKEDWSERTAEWIRDAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAGTMH 123 SPAMV+D E WSE TA W+R+AA PMFGICYGHQLL HA GG+VGYNPAGR GT Sbjct: 70 SPAMVSDLEPWSEDTAAWLREAAAAGLPMFGICYGHQLLAHALGGKVGYNPAGREVGTQT 129 Query: 124 VKTLECCRQDELLGVLPSEFPAHMLHMQSVLRPPKDAIVMARSPMDPHHVIKHKHNVYST 183 V+ L D LL LP FPA MLH Q+VL+ P A V+ARS +DPH +I+ N++ST Sbjct: 130 VELLPAAAGDRLLADLPPTFPAQMLHAQTVLQLPPGAAVLARSDLDPHQMIRIGRNIFST 189 Query: 184 QFHPEFSPEFVRAHLHYYTDIYRGCGIDAQALCEKVCDTPQSTGLLRRFLELYA 237 QFHPEF P+FVRAHL + Y +D L V TP S L+RRFL+ YA Sbjct: 190 QFHPEFGPDFVRAHLERFGRRYAAENLDVPGLSANVRATPVSGELVRRFLDAYA 243