BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1615.p (343 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775637.1| Fe3+ ABC transporter periplasmic protein [He... 625 e-177 ref|YP_001796544.1| ABC transporter, periplasmic binding compone... 534 e-149 gb|AEG71758.1| solute-binding periplasmic protein (pbp) [Ralston... 533 e-149 ref|YP_299714.1| extracellular solute-binding protein [Ralstonia... 532 e-149 emb|CAQ36706.1| solute-binding periplasmic protein (pbp) [Ralsto... 532 e-149 >ref|YP_003775637.1| Fe3+ ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63729.1| ABC-type Fe3+ transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 371 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 333/342 (97%), Positives = 339/342 (99%) Query: 2 KKTKLFSLFASVIGAGLLFSAQAHAATTLTVYTALEADQIKAYQAAFQKANPDIEIKWVR 61 +KTKLFSLFASVIGAG+LFSAQAHAATTLTVYTALEADQIKAYQAAF KANPDIEIKWVR Sbjct: 30 EKTKLFSLFASVIGAGMLFSAQAHAATTLTVYTALEADQIKAYQAAFHKANPDIEIKWVR 89 Query: 62 DSTGIVTAKLLAEKANPQADVIWGLAATSLALLDKEGMLTPYAPQGLSAIDAKYRSAANP 121 DSTGIVTAKLLAEKANPQADVIWGLAATSLALLDKEGML PYAPQGLSAIDAKYRSAANP Sbjct: 90 DSTGIVTAKLLAEKANPQADVIWGLAATSLALLDKEGMLMPYAPQGLSAIDAKYRSAANP 149 Query: 122 PAWVGMDVWASAICFNTVEAQKQGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSA 181 PAWVGMDVWASAICFNTVEAQKQGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSA Sbjct: 150 PAWVGMDVWASAICFNTVEAQKQGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSA 209 Query: 182 WLQMMGEEKGWAYMDALHKNIGQYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPI 241 WLQMMGE+KGWAYMDALHKNIGQYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPI Sbjct: 210 WLQMMGEDKGWAYMDALHKNIGQYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPI 269 Query: 242 DVILPSEGLGWDIEATAIVKGTKNLEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPD 301 DVILPSEGLGWDIEATAIVKG+K+LEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPD Sbjct: 270 DVILPSEGLGWDIEATAIVKGSKHLEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPD 329 Query: 302 ELLPADYEKRLIKNDFTWASTSRDRILTEWSKRYESKSEKKQ 343 ELL ADYEKRLIKNDFTWAST+RDRILTEWSKRYESKSEKKQ Sbjct: 330 ELLSADYEKRLIKNDFTWASTNRDRILTEWSKRYESKSEKKQ 371 >ref|YP_001796544.1| ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] emb|CAP63305.1| putative ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 344 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 272/324 (83%), Positives = 300/324 (92%) Query: 19 LFSAQAHAATTLTVYTALEADQIKAYQAAFQKANPDIEIKWVRDSTGIVTAKLLAEKANP 78 L + A AAT LTVYTALEADQI AY+AAF+K +PDIEIKWVRDSTGIVTAKLLAEKA P Sbjct: 21 LLAGHAAAATVLTVYTALEADQIAAYKAAFEKVHPDIEIKWVRDSTGIVTAKLLAEKAAP 80 Query: 79 QADVIWGLAATSLALLDKEGMLTPYAPQGLSAIDAKYRSAANPPAWVGMDVWASAICFNT 138 +AD +WGLA +SLA+LDKEGML PYAP+ L AIDA+YRSAANPPAWVGMDVW +AICFNT Sbjct: 81 RADAVWGLAGSSLAILDKEGMLEPYAPKNLGAIDARYRSAANPPAWVGMDVWGAAICFNT 140 Query: 139 VEAQKQGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSAWLQMMGEEKGWAYMDAL 198 VEAQKQGLP+PTSWADLTKPVYAGK+VMP+PASSGTG+LD SAWLQMMGE+KGW YMDAL Sbjct: 141 VEAQKQGLPRPTSWADLTKPVYAGKVVMPHPASSGTGFLDASAWLQMMGEQKGWQYMDAL 200 Query: 199 HKNIGQYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPIDVILPSEGLGWDIEATA 258 HKNIG YTHSGSKPCK AA GEFPIGIAFEYRA+K+KKEGAPID++LPSEGLGWDIEATA Sbjct: 201 HKNIGLYTHSGSKPCKMAAQGEFPIGIAFEYRAMKSKKEGAPIDIVLPSEGLGWDIEATA 260 Query: 259 IVKGTKNLEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPDELLPADYEKRLIKNDFT 318 IVKGTKNLEAA+KLADFSAS+EAMALYEKNFAV+A+PG+A+PD LLPADYEKRLIKNDF Sbjct: 261 IVKGTKNLEAARKLADFSASREAMALYEKNFAVLAVPGIARPDALLPADYEKRLIKNDFR 320 Query: 319 WASTSRDRILTEWSKRYESKSEKK 342 WAS +RDRIL EWSKRYE K+EKK Sbjct: 321 WASDNRDRILAEWSKRYEGKAEKK 344 >gb|AEG71758.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum Po82] Length = 357 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 278/319 (87%), Positives = 299/319 (93%) Query: 24 AHAATTLTVYTALEADQIKAYQAAFQKANPDIEIKWVRDSTGIVTAKLLAEKANPQADVI 83 A AATTLTVYTALEADQ+ AY+AAF+KANPDIEIKWVRDSTGIVTAKLLAEKANP ADV+ Sbjct: 39 AQAATTLTVYTALEADQVAAYKAAFEKANPDIEIKWVRDSTGIVTAKLLAEKANPHADVV 98 Query: 84 WGLAATSLALLDKEGMLTPYAPQGLSAIDAKYRSAANPPAWVGMDVWASAICFNTVEAQK 143 WGLAA+SLA+LDKEGML PYAP LS IDAKYRSAANPPAWVGMDVW + ICFNTVEAQK Sbjct: 99 WGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFNTVEAQK 158 Query: 144 QGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSAWLQMMGEEKGWAYMDALHKNIG 203 Q LPKPTSWADL KPVYAGKIVMPNPASSGTGYLDVSAWLQM+GE+KGWAYMDALH+NIG Sbjct: 159 QNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDALHQNIG 218 Query: 204 QYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPIDVILPSEGLGWDIEATAIVKGT 263 QYTHSGSKPCK AA GE+PIG++FEYRAVK+KKEGAPID++LPSEGLGWDIEATAIVKGT Sbjct: 219 QYTHSGSKPCKMAAQGEYPIGVSFEYRAVKSKKEGAPIDLVLPSEGLGWDIEATAIVKGT 278 Query: 264 KNLEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPDELLPADYEKRLIKNDFTWASTS 323 KNLEAA+KLADFSAS AMALYEKNFAVVA+PGVAKPD LLPADYEKRLIKNDF WAS + Sbjct: 279 KNLEAARKLADFSASPAAMALYEKNFAVVAMPGVAKPDPLLPADYEKRLIKNDFAWASAN 338 Query: 324 RDRILTEWSKRYESKSEKK 342 RDRIL EW+KRY+ KSEKK Sbjct: 339 RDRILAEWTKRYDGKSEKK 357 >ref|YP_299714.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gb|AAZ64870.1| extracellular solute-binding protein, family 1 [Ralstonia eutropha JMP134] Length = 340 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 272/315 (86%), Positives = 297/315 (94%) Query: 28 TTLTVYTALEADQIKAYQAAFQKANPDIEIKWVRDSTGIVTAKLLAEKANPQADVIWGLA 87 T LTVYTALEADQI AY+AAF+K NPDIEIKWVRDSTGIVTAKLLAEKA P+AD +WGLA Sbjct: 26 TVLTVYTALEADQIAAYKAAFEKVNPDIEIKWVRDSTGIVTAKLLAEKAAPRADAVWGLA 85 Query: 88 ATSLALLDKEGMLTPYAPQGLSAIDAKYRSAANPPAWVGMDVWASAICFNTVEAQKQGLP 147 +SLA+LDKEGML PYAP+ L+AIDA+YRSAANPPAWVGMDVW +AICFNTVEAQKQGLP Sbjct: 86 GSSLAILDKEGMLQPYAPKNLAAIDAQYRSAANPPAWVGMDVWGAAICFNTVEAQKQGLP 145 Query: 148 KPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSAWLQMMGEEKGWAYMDALHKNIGQYTH 207 KPTSWADLTKPVYAGKIVMP+PASSGTG+LDVSAWLQMMG++KGW YMDALHKNIG YTH Sbjct: 146 KPTSWADLTKPVYAGKIVMPHPASSGTGFLDVSAWLQMMGDKKGWDYMDALHKNIGLYTH 205 Query: 208 SGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPIDVILPSEGLGWDIEATAIVKGTKNLE 267 SGSKPCK AA GEFPIGIAFEYRA+K+KKEGAPID++LPSEGLGWDIEATAI+KGTKNLE Sbjct: 206 SGSKPCKMAAQGEFPIGIAFEYRAMKSKKEGAPIDIVLPSEGLGWDIEATAIIKGTKNLE 265 Query: 268 AAKKLADFSASKEAMALYEKNFAVVAIPGVAKPDELLPADYEKRLIKNDFTWASTSRDRI 327 AA+KLADFSAS+EAM LYEKNFAV+A+PGVAKPD LLPADYEKRLIKNDF WAS +RDRI Sbjct: 266 AARKLADFSASREAMGLYEKNFAVLAVPGVAKPDALLPADYEKRLIKNDFVWASANRDRI 325 Query: 328 LTEWSKRYESKSEKK 342 LTEWSKRYE K+EKK Sbjct: 326 LTEWSKRYEGKAEKK 340 >emb|CAQ36706.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 339 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 277/319 (86%), Positives = 299/319 (93%) Query: 24 AHAATTLTVYTALEADQIKAYQAAFQKANPDIEIKWVRDSTGIVTAKLLAEKANPQADVI 83 A AATTLTVYTALEADQ+ AY+AAF+KANPDIEIKWVRDSTGIVTAKLLAEKANP ADV+ Sbjct: 21 AQAATTLTVYTALEADQVAAYKAAFEKANPDIEIKWVRDSTGIVTAKLLAEKANPHADVV 80 Query: 84 WGLAATSLALLDKEGMLTPYAPQGLSAIDAKYRSAANPPAWVGMDVWASAICFNTVEAQK 143 WGLAA+SLA+LDKEGML PYAP LS IDAKYRSAANPPAWVGMDVW + ICFNTVEAQK Sbjct: 81 WGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFNTVEAQK 140 Query: 144 QGLPKPTSWADLTKPVYAGKIVMPNPASSGTGYLDVSAWLQMMGEEKGWAYMDALHKNIG 203 Q LPKPTSWADL KPVYAGKIVMPNPASSGTGYLDVSAWLQM+GE+KGWAYMDALH+NIG Sbjct: 141 QNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDALHQNIG 200 Query: 204 QYTHSGSKPCKQAATGEFPIGIAFEYRAVKTKKEGAPIDVILPSEGLGWDIEATAIVKGT 263 QYTHSGSKPCK AA GE+PIG++FEYRAVK+KKEGAPID++LPSEGLGWDIEATAIVKGT Sbjct: 201 QYTHSGSKPCKMAAQGEYPIGVSFEYRAVKSKKEGAPIDLVLPSEGLGWDIEATAIVKGT 260 Query: 264 KNLEAAKKLADFSASKEAMALYEKNFAVVAIPGVAKPDELLPADYEKRLIKNDFTWASTS 323 KNLEAA+KLADFSAS AMALYEKNFAVVA+PGV+KPD LLPADYEKRLIKNDF WAS + Sbjct: 261 KNLEAARKLADFSASPAAMALYEKNFAVVAMPGVSKPDPLLPADYEKRLIKNDFAWASAN 320 Query: 324 RDRILTEWSKRYESKSEKK 342 RDRIL EW+KRY+ KSEKK Sbjct: 321 RDRILAEWTKRYDGKSEKK 339