BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1610.p (433 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775633.1| H+/citrate symporter protein [Herbaspirillum... 691 0.0 ref|YP_004753979.1| citrate transporter [Collimonas fungivorans ... 602 e-170 ref|ZP_07674186.1| citrate transporter [Ralstonia sp. 5_7_47FAA]... 550 e-154 ref|YP_001893322.1| citrate/H+ symporter, CitMHS family [Ralston... 549 e-154 ref|ZP_04945968.1| H+/citrate symporter [Burkholderia dolosa AUO... 523 e-146 >ref|YP_003775633.1| H+/citrate symporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ63725.1| H+/citrate symporter protein [Herbaspirillum seropedicae SmR1] Length = 433 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 421/433 (97%), Positives = 428/433 (98%) Query: 1 MLALLGFVTIVSLFTAILTKRMSPLVALIAIPIIAALVGGFGLQTSKFIVQGVTAIAPVA 60 MLALLGFVTIVSLFTAILTK+MSPLVALIAIPI+AAL+GGFGLQTSKFIVQGVTAIAPVA Sbjct: 1 MLALLGFVTIVSLFTAILTKKMSPLVALIAIPIVAALLGGFGLQTSKFIVQGVTAIAPVA 60 Query: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI Sbjct: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 Query: 121 TIPAMLPLYTRLGIDKRILACVASMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLVPVQ 180 TIPAMLPLYTRLGIDKRILACV SMAAGVNFLPWTGPMIRASAALHIPVSDIFTPL+PVQ Sbjct: 121 TIPAMLPLYTRLGIDKRILACVTSMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLIPVQ 180 Query: 181 LVGLAFVFIASYLLGLKEERRLGLGKGSTVDFVQQHELSEAQLKIRRPQNFWANIVLTVF 240 LVGL FVFIASYLLGLKEERRLGLGKG+TVDFVQQHELSEAQLKIRRPQNFWANIVLT+F Sbjct: 181 LVGLTFVFIASYLLGLKEERRLGLGKGATVDFVQQHELSEAQLKIRRPQNFWANIVLTIF 240 Query: 241 VLGVMISGKVDPVVMFMIGVVLALMINYRDVAMQRERIDAHAKAALLMASILFAAGVFTG 300 VLGVMISGKVDPVVMFMIGVVLALMINYRDV MQRERIDAHAKAALLMASILFAAGVFTG Sbjct: 241 VLGVMISGKVDPVVMFMIGVVLALMINYRDVTMQRERIDAHAKAALLMASILFAAGVFTG 300 Query: 301 IMTKSGMLSAMAKTAVGFVPPEMAGHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH 360 IMTKSGMLSAMAKTAVG VPPEMA HIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH Sbjct: 301 IMTKSGMLSAMAKTAVGLVPPEMASHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH 360 Query: 361 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASVVM 420 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGAS+VM Sbjct: 361 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASLVM 420 Query: 421 TIACVVLGLFPLF 433 TIACVVLGLFPLF Sbjct: 421 TIACVVLGLFPLF 433 >ref|YP_004753979.1| citrate transporter [Collimonas fungivorans Ter331] gb|AEK63156.1| citrate transporter [Collimonas fungivorans Ter331] Length = 432 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 369/432 (85%), Positives = 397/432 (91%) Query: 1 MLALLGFVTIVSLFTAILTKRMSPLVALIAIPIIAALVGGFGLQTSKFIVQGVTAIAPVA 60 MLALLGF+TIV+L AILTK+MSPLVALIAIPIIAAL+GGFGL+TSKFIV G+T+IAPVA Sbjct: 1 MLALLGFITIVTLLAAILTKKMSPLVALIAIPIIAALIGGFGLETSKFIVSGITSIAPVA 60 Query: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 GMFVFAILFFGIVTDAGMLDPIIS IL+ VGSRPTRIVPGTALLALLIHLDGSGAVTFL+ Sbjct: 61 GMFVFAILFFGIVTDAGMLDPIISAILRIVGSRPTRIVPGTALLALLIHLDGSGAVTFLV 120 Query: 121 TIPAMLPLYTRLGIDKRILACVASMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLVPVQ 180 TIPAMLPLYTRLGIDKRILACVAS+AAGVNFLPWTGPMIRASAALHIPVSDIFTPL+PVQ Sbjct: 121 TIPAMLPLYTRLGIDKRILACVASLAAGVNFLPWTGPMIRASAALHIPVSDIFTPLIPVQ 180 Query: 181 LVGLAFVFIASYLLGLKEERRLGLGKGSTVDFVQQHELSEAQLKIRRPQNFWANIVLTVF 240 +VGL FVF +Y LGLKEERRLGL KG+ + FV HELSEA+ IRRPQNFW NIVLTVF Sbjct: 181 IVGLVFVFSVAYYLGLKEERRLGLTKGAPLGFVHTHELSEAEKNIRRPQNFWINIVLTVF 240 Query: 241 VLGVMISGKVDPVVMFMIGVVLALMINYRDVAMQRERIDAHAKAALLMASILFAAGVFTG 300 VLGVMISGK+DPVVMFMIGVVLALMINYR+ MQR RIDAHAKAALLMASILFAAGVFTG Sbjct: 241 VLGVMISGKIDPVVMFMIGVVLALMINYRNADMQRTRIDAHAKAALLMASILFAAGVFTG 300 Query: 301 IMTKSGMLSAMAKTAVGFVPPEMAGHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH 360 IMTKSGMLSAMAK AVG VPP MA HIP LG+LSMPLS++FDPDSFYFGVLPVIAEV H Sbjct: 301 IMTKSGMLSAMAKMAVGLVPPSMASHIPAALGLLSMPLSMVFDPDSFYFGVLPVIAEVGH 360 Query: 361 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASVVM 420 MLGV + VAQAALLGQMTTGFPVSPLTPATFLV GLAGI+LADHQKYT +LF ASV+M Sbjct: 361 MLGVQPLHVAQAALLGQMTTGFPVSPLTPATFLVAGLAGIDLADHQKYTFKYLFAASVIM 420 Query: 421 TIACVVLGLFPL 432 TI CV++G+FPL Sbjct: 421 TITCVLIGVFPL 432 >ref|ZP_07674186.1| citrate transporter [Ralstonia sp. 5_7_47FAA] gb|EFP67302.1| citrate transporter [Ralstonia sp. 5_7_47FAA] Length = 432 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 328/431 (76%), Positives = 377/431 (87%) Query: 1 MLALLGFVTIVSLFTAILTKRMSPLVALIAIPIIAALVGGFGLQTSKFIVQGVTAIAPVA 60 MLALLG +TIV+LF ILTKRMSPLVALIAIP+IAALVGGFGL TSKFI+ G+ +APVA Sbjct: 1 MLALLGLLTIVALFVVILTKRMSPLVALIAIPVIAALVGGFGLNTSKFIIGGIKDVAPVA 60 Query: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 GMF+FAIL+FGIVTDAGMLDPII RIL+TVGSRP RIV G+ALLALLIHLDGSGAV FLI Sbjct: 61 GMFIFAILYFGIVTDAGMLDPIIDRILRTVGSRPPRIVVGSALLALLIHLDGSGAVAFLI 120 Query: 121 TIPAMLPLYTRLGIDKRILACVASMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLVPVQ 180 TIPAMLPLY RLG+D+RILACV SMA GVNFLPWTGPMIRASA+LH+PV+DIF PL+PVQ Sbjct: 121 TIPAMLPLYDRLGMDRRILACVTSMACGVNFLPWTGPMIRASASLHMPVTDIFNPLIPVQ 180 Query: 181 LVGLAFVFIASYLLGLKEERRLGLGKGSTVDFVQQHELSEAQLKIRRPQNFWANIVLTVF 240 + GL FVF ++LLG +EE+RLGL + V +++A+ +RRP+NFW N++LTV Sbjct: 181 IAGLVFVFACAWLLGKREEKRLGLANHAGGTQVVARPVTDAEQALRRPRNFWINLILTVV 240 Query: 241 VLGVMISGKVDPVVMFMIGVVLALMINYRDVAMQRERIDAHAKAALLMASILFAAGVFTG 300 V+GVM+SGKVDPVVMFM+GVV AL+INY +V QR+R+DAHAKAAL+MASIL AAGVFTG Sbjct: 241 VMGVMVSGKVDPVVMFMLGVVAALLINYPNVDQQRQRVDAHAKAALMMASILLAAGVFTG 300 Query: 301 IMTKSGMLSAMAKTAVGFVPPEMAGHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH 360 IM+KSGML+AMAKTAV F+PP MA HIPVVLGVLSMPLSLLFDPDSFYFGVLPV+AE S Sbjct: 301 IMSKSGMLTAMAKTAVDFIPPGMAHHIPVVLGVLSMPLSLLFDPDSFYFGVLPVVAEASK 360 Query: 361 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASVVM 420 MLGV + VAQAA+LGQMTTGFPVSPLTPATFLV GL GIELADHQK++IPFLFGAS++M Sbjct: 361 MLGVAPVHVAQAAVLGQMTTGFPVSPLTPATFLVVGLCGIELADHQKFSIPFLFGASLLM 420 Query: 421 TIACVVLGLFP 431 T VVLG+ P Sbjct: 421 TAVAVVLGVLP 431 >ref|YP_001893322.1| citrate/H+ symporter, CitMHS family [Ralstonia pickettii 12J] ref|YP_002983665.1| citrate/H+ symporter, CitMHS family [Ralstonia pickettii 12D] gb|ACD29895.1| citrate/H+ symporter, CitMHS family [Ralstonia pickettii 12J] gb|ACS64993.1| citrate/H+ symporter, CitMHS family [Ralstonia pickettii 12D] Length = 432 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 330/431 (76%), Positives = 376/431 (87%) Query: 1 MLALLGFVTIVSLFTAILTKRMSPLVALIAIPIIAALVGGFGLQTSKFIVQGVTAIAPVA 60 MLALLG +TIV+LF ILTKRMSPLVALIAIP+IAALVGGFGL TSKFI+ G+ +APVA Sbjct: 1 MLALLGLLTIVALFVVILTKRMSPLVALIAIPVIAALVGGFGLNTSKFIIGGIKDVAPVA 60 Query: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 GMF+FAIL+FGIVTDAGMLDPII RIL+TVGSRP RIV G+ALLALLIHLDGSGAV FLI Sbjct: 61 GMFIFAILYFGIVTDAGMLDPIIDRILRTVGSRPPRIVVGSALLALLIHLDGSGAVAFLI 120 Query: 121 TIPAMLPLYTRLGIDKRILACVASMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLVPVQ 180 TIPAMLPLY RLG+D+RILACV SMA GVNFLPWTGPMIRASA+LH+PV+DIF PL+PVQ Sbjct: 121 TIPAMLPLYDRLGMDRRILACVTSMACGVNFLPWTGPMIRASASLHMPVTDIFNPLIPVQ 180 Query: 181 LVGLAFVFIASYLLGLKEERRLGLGKGSTVDFVQQHELSEAQLKIRRPQNFWANIVLTVF 240 + GL FVF ++LLG +EE+RLGL + V LS+A+ +RRP+NFW NI+LTV Sbjct: 181 IAGLVFVFACAWLLGKREEKRLGLTNHAGGAQVVARPLSDAEQALRRPRNFWINIILTVV 240 Query: 241 VLGVMISGKVDPVVMFMIGVVLALMINYRDVAMQRERIDAHAKAALLMASILFAAGVFTG 300 V+GVM+SGKVDPVVMFM+GVV AL+INY +V QR+R+DAHAKAAL+MASIL AAGVFTG Sbjct: 241 VMGVMVSGKVDPVVMFMLGVVAALLINYPNVDQQRQRVDAHAKAALMMASILLAAGVFTG 300 Query: 301 IMTKSGMLSAMAKTAVGFVPPEMAGHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEVSH 360 IM+KSGML+AMAKTAV F+P MA HIPVVLGVLSMPLSLLFDPDSFYFGVLPV+AE S Sbjct: 301 IMSKSGMLTAMAKTAVDFIPSGMAHHIPVVLGVLSMPLSLLFDPDSFYFGVLPVVAEASK 360 Query: 361 MLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASVVM 420 MLGV + VAQAA+LGQMTTGFPVSPLTPATFLV GL GIELADHQK++IPFLFGAS++M Sbjct: 361 MLGVAPVHVAQAAVLGQMTTGFPVSPLTPATFLVVGLCGIELADHQKFSIPFLFGASLLM 420 Query: 421 TIACVVLGLFP 431 T VVLG+ P Sbjct: 421 TAVAVVLGVLP 431 >ref|ZP_04945968.1| H+/citrate symporter [Burkholderia dolosa AUO158] gb|EAY69139.1| H+/citrate symporter [Burkholderia dolosa AUO158] Length = 432 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 303/432 (70%), Positives = 358/432 (82%), Gaps = 2/432 (0%) Query: 1 MLALLGFVTIVSLFTAILTKRMSPLVALIAIPIIAALVGGFGLQTSKFIVQGVTAIAPVA 60 ML LLG TIV L AIL++RMSPLVALI +PI A+L+GGFGLQTSKF++ G+ +APV Sbjct: 1 MLPLLGLATIVVLLAAILSRRMSPLVALIVVPIAASLIGGFGLQTSKFVIDGLRGLAPVV 60 Query: 61 GMFVFAILFFGIVTDAGMLDPIISRILKTVGSRPTRIVPGTALLALLIHLDGSGAVTFLI 120 GMFVFAILFFG +TDAG LDPII RIL+ VG+RPTRIV GT LLALLIHLDGSGAV FL+ Sbjct: 61 GMFVFAILFFGTITDAGTLDPIIERILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLV 120 Query: 121 TIPAMLPLYTRLGIDKRILACVASMAAGVNFLPWTGPMIRASAALHIPVSDIFTPLVPVQ 180 TIPA+LPLY RL +D+R+LA SMAAG+NFLPWTGPMIRASA+LH+PVS +F PL+PVQ Sbjct: 121 TIPAVLPLYDRLNMDRRVLAAAVSMAAGINFLPWTGPMIRASASLHLPVSALFNPLIPVQ 180 Query: 181 LVGLAFVFIASYLLGLKEERRLGLGKGSTVDFVQQHELSEAQLKIRRPQNFWANIVLTVF 240 +GL FVF +Y LG +EE+RLGL +G + ELS + +RRP+NFW N+VLT+ Sbjct: 181 AIGLVFVFGVAYWLGRREEKRLGLSRGDASVPLPTRELSADEQALRRPRNFWFNVVLTLV 240 Query: 241 VLGVMIS--GKVDPVVMFMIGVVLALMINYRDVAMQRERIDAHAKAALLMASILFAAGVF 298 VLG M++ K+ P ++FM+G+ +ALM+NY DV MQR+RIDAHA+AAL+MA IL AAGVF Sbjct: 241 VLGTMVAMGEKIPPAIVFMVGLCIALMVNYPDVDMQRKRIDAHARAALMMAGILLAAGVF 300 Query: 299 TGIMTKSGMLSAMAKTAVGFVPPEMAGHIPVVLGVLSMPLSLLFDPDSFYFGVLPVIAEV 358 TG+M SGML AMA+ AVGFVPP MA HIPV LG+ SMPLS+LFDPDSFYFGVLPVIAEV Sbjct: 301 TGVMQGSGMLKAMAQAAVGFVPPSMAAHIPVALGIASMPLSMLFDPDSFYFGVLPVIAEV 360 Query: 359 SHMLGVPTIQVAQAALLGQMTTGFPVSPLTPATFLVCGLAGIELADHQKYTIPFLFGASV 418 + LGVP +QV QAALLGQMTTGFPVSPLTPATFLV GL GIELA+HQK+T P LFGAS+ Sbjct: 361 AGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLCGIELAEHQKFTFPLLFGASI 420 Query: 419 VMTIACVVLGLF 430 VMTIACVVLG+F Sbjct: 421 VMTIACVVLGVF 432