BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1609.p (451 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775632.1| hypothetical protein Hsero_2225 [Herbaspiril... 736 0.0 ref|ZP_02881835.1| protein of unknown function DUF1446 [Burkhold... 580 e-163 ref|YP_530714.1| hypothetical protein RPC_0825 [Rhodopseudomonas... 572 e-161 ref|ZP_03266762.1| protein of unknown function DUF1446 [Burkhold... 571 e-161 ref|YP_004231001.1| hypothetical protein BC1001_4552 [Burkholder... 569 e-160 >ref|YP_003775632.1| hypothetical protein Hsero_2225 [Herbaspirillum seropedicae SmR1] gb|ADJ63724.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 451 Score = 736 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 402/451 (89%), Positives = 430/451 (95%) Query: 1 MTQDPQRTVRIGAGAGYSGDRIEPAAELAAHGQLDYLIFECLAERTIAIGQQARLADPGK 60 MT DPQR VRIGAGAGYSGDRIEPAAELA G+LDYLIFECLAERTIAIGQQARLADP K Sbjct: 1 MTHDPQRKVRIGAGAGYSGDRIEPAAELAERGELDYLIFECLAERTIAIGQQARLADPTK 60 Query: 61 GYDPLLAERMHAVLKTCATQGIRIITNMGAANPLAAAQRVREIARELGLSGLKVAAVAGD 120 GYDPLLAERMHAVLKTCA +G+RIITNMGAANP AAAQRVREIAR LGL+ LKVAAV GD Sbjct: 61 GYDPLLAERMHAVLKTCADKGVRIITNMGAANPAAAAQRVREIARTLGLAHLKVAAVTGD 120 Query: 121 DVLEAVQQDEWRIEDNGQPVASLGESLISANAYLGIAPIVEALQAGAQVIITGRVADPAL 180 DVL+AVQ+ ++RIEDNGQPV+SLGE LISANAYLG+API+EALQAGA VIITGRVADPAL Sbjct: 121 DVLQAVQEGDFRIEDNGQPVSSLGERLISANAYLGVAPILEALQAGADVIITGRVADPAL 180 Query: 181 VLAPLVHEFGWAPDDWDKLGQGTLIGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGE 240 VLAPLVHEFGWA DDWDKLGQGTL+GHLLECAGQITGGYFADPGKKDVAGLARLGFPIGE Sbjct: 181 VLAPLVHEFGWAADDWDKLGQGTLVGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGE 240 Query: 241 VKADGSAIITKVAGSGGQVTARTCKEQLLYEIHDPSAYFTPDVIADFSQVRIEEVGPDRV 300 V ADGSA+ITKVAGSGGQVTA+TCKEQLLYEIHDPSAY+TPDV+ADFSQV+I E+GPDRV Sbjct: 241 VSADGSAVITKVAGSGGQVTAQTCKEQLLYEIHDPSAYYTPDVVADFSQVQITEIGPDRV 300 Query: 301 AVTGGRGRARPQTLKTTLGYRDSFIGEGQISYAGPGAQARAQLAGEIVRERLALTGVQTE 360 AV+GGRGRARP TLKTTLGYRDSFIGEGQISYAGPGAQARAQLA EIVRERLALTGV+T+ Sbjct: 301 AVSGGRGRARPATLKTTLGYRDSFIGEGQISYAGPGAQARAQLAAEIVRERLALTGVETD 360 Query: 361 ELRVDLIGINAIAGEQMSAHAPEPHEVRLRVTGRTASMKEAVRIGNEVETLYTNGPAGGG 420 ELR+DLIG+NAIAG QMSA APEP+EVRLRV+GRTASM++AVRIGNEVETLYTNGPAGGG Sbjct: 361 ELRLDLIGMNAIAGPQMSAGAPEPYEVRLRVSGRTASMQQAVRIGNEVETLYTNGPAGGG 420 Query: 421 GATKSAREVIAVLSLLLPRTLVHPSVFIEEA 451 GATKSAREVIAVLSLLLPR+LVHPSV IEEA Sbjct: 421 GATKSAREVIAVLSLLLPRSLVHPSVHIEEA 451 >ref|ZP_02881835.1| protein of unknown function DUF1446 [Burkholderia graminis C4D1M] gb|EDT12080.1| protein of unknown function DUF1446 [Burkholderia graminis C4D1M] Length = 452 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 308/446 (69%), Positives = 360/446 (80%) Query: 6 QRTVRIGAGAGYSGDRIEPAAELAAHGQLDYLIFECLAERTIAIGQQARLADPGKGYDPL 65 +R VRIGAGAGYSGDRIEPA ELA HG LDYL+FECLAERTIAI QQAR DP GYDPL Sbjct: 7 ERVVRIGAGAGYSGDRIEPAVELAEHGALDYLVFECLAERTIAIAQQARSKDPELGYDPL 66 Query: 66 LAERMHAVLKTCATQGIRIITNMGAANPLAAAQRVREIARELGLSGLKVAAVAGDDVLEA 125 L RMHAVL + G+RI++NMGAANPLAAA++ EIAR LGL G+++AA+ GDDVL+A Sbjct: 67 LETRMHAVLPAASRNGVRIVSNMGAANPLAAARKTAEIARSLGLGGIRIAAITGDDVLDA 126 Query: 126 VQQDEWRIEDNGQPVASLGESLISANAYLGIAPIVEALQAGAQVIITGRVADPALVLAPL 185 V+ ++R E++G+ VA L+SANAYLG IV+AL AGAQ+++TGRVADP+L +APL Sbjct: 127 VRSGDYRFEESGERVADYDTRLVSANAYLGAGAIVDALAAGAQIVLTGRVADPSLFVAPL 186 Query: 186 VHEFGWAPDDWDKLGQGTLIGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVKADG 245 +HEFGW DDW LGQ T+IGHLLECAGQITGGYFADPG KDV LARLGFPI EV ADG Sbjct: 187 IHEFGWRMDDWPTLGQATVIGHLLECAGQITGGYFADPGFKDVPALARLGFPIAEVGADG 246 Query: 246 SAIITKVAGSGGQVTARTCKEQLLYEIHDPSAYFTPDVIADFSQVRIEEVGPDRVAVTGG 305 + +ITK+ +GG+V TCKEQLLYEIHDP Y PDV+ADFS V IE+ GPDRV V+GG Sbjct: 247 AVVITKLTRAGGRVNEATCKEQLLYEIHDPQRYLQPDVVADFSAVHIEQEGPDRVRVSGG 306 Query: 306 RGRARPQTLKTTLGYRDSFIGEGQISYAGPGAQARAQLAGEIVRERLALTGVQTEELRVD 365 G R TLK ++ Y D FIGEGQISYAGPGA ARA+LA +IVRERLALTGVQT ELR D Sbjct: 307 NGAPRTDTLKVSVAYFDGFIGEGQISYAGPGALARARLALDIVRERLALTGVQTHELRFD 366 Query: 366 LIGINAIAGEQMSAHAPEPHEVRLRVTGRTASMKEAVRIGNEVETLYTNGPAGGGGATKS 425 LIG+NA+ GE ++A + EP+EVR RVTGRTAS+ +AVRIGNEVETLYTNGPAGGGG TKS Sbjct: 367 LIGVNALHGETLAAGSGEPYEVRARVTGRTASLAQAVRIGNEVETLYTNGPAGGGGVTKS 426 Query: 426 AREVIAVLSLLLPRTLVHPSVFIEEA 451 AREV+AV S+LLPR V P+ + EA Sbjct: 427 AREVVAVQSVLLPREQVKPAFTMVEA 452 >ref|YP_530714.1| hypothetical protein RPC_0825 [Rhodopseudomonas palustris BisB18] gb|ABD86395.1| protein of unknown function DUF1446 [Rhodopseudomonas palustris BisB18] Length = 445 Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 298/444 (67%), Positives = 366/444 (82%), Gaps = 1/444 (0%) Query: 8 TVRIGAGAGYSGDRIEPAAELAAHGQLDYLIFECLAERTIAIGQQARLADPGKGYDPLLA 67 T+RIG+GAGYSGDRIEPA ELA G ++YL+FECLAERTIAI Q+A+LADP +GYDPLL Sbjct: 3 TIRIGSGAGYSGDRIEPAVELADKGDINYLVFECLAERTIAIAQKAKLADPTQGYDPLLV 62 Query: 68 ERMHAVLKTCATQGIRIITNMGAANPLAAAQRVREIARELGLSGLKVAAVAGDDVLEAVQ 127 ER+ AVL C +GI+I+TNMGAANP AAA + REIA LGL +K+AA++GDDV+EA++ Sbjct: 63 ERLEAVLAICKKKGIKIVTNMGAANPKAAAAKTREIAGRLGLGDIKIAAISGDDVIEALK 122 Query: 128 QDEWRIEDNGQPVASLGESLISANAYLGIAPIVEALQAGAQVIITGRVADPALVLAPLVH 187 + +I + G+P +++ SL+SANAY+G APIVEAL GA V+ITGRVADP++ LAPL+H Sbjct: 123 TSDVKITETGEPASNMLNSLVSANAYVGAAPIVEALAKGADVVITGRVADPSMFLAPLIH 182 Query: 188 EFGWAPDDWDKLGQGTLIGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVKADGSA 247 EFGW+ DDWDKLG+GT +GHLLECAGQ+TGGY+A+PGKKDVA LARLGFPI EV DG+ Sbjct: 183 EFGWSLDDWDKLGKGTAVGHLLECAGQVTGGYYAEPGKKDVADLARLGFPIAEVSEDGAT 242 Query: 248 IITKVAGSGGQVTARTCKEQLLYEIHDPSAYFTPDVIADFSQVRIEEVGPDRVAVTGGRG 307 IITKV GSGG+VT TCKEQ+LYE+HD + Y TPDV ADFS++ +E+ P+++ V G G Sbjct: 243 IITKVEGSGGKVTEHTCKEQILYEVHDLANYLTPDVTADFSKITFKEIAPNQIRVEGATG 302 Query: 308 RARPQTLKTTLGYRDSFIGEGQISYAGPGAQARAQLAGEIVRERLALTGVQTEELRVDLI 367 RARP+TLK ++GY D +IGEGQISYAGPGA AR +LA EIV+ERL LTGVQT ELR DLI Sbjct: 303 RARPETLKVSVGYVDGYIGEGQISYAGPGALARGELALEIVKERLKLTGVQTSELRFDLI 362 Query: 368 GINAIAGEQMSAHAPEPHEVRLRVTGRTASMKEAVRIGNEVETLYTNGPAGGGGATKSAR 427 G+N+I + + A APEP EVR+RVTGRT SMKEAVRIGNEVETLYTNGPA GGGATKSA+ Sbjct: 363 GVNSIH-QDVLAPAPEPTEVRVRVTGRTDSMKEAVRIGNEVETLYTNGPASGGGATKSAK 421 Query: 428 EVIAVLSLLLPRTLVHPSVFIEEA 451 +V+A+LS L PR V+P + EA Sbjct: 422 QVVAMLSALFPRDKVNPVIDYLEA 445 >ref|ZP_03266762.1| protein of unknown function DUF1446 [Burkholderia sp. H160] gb|EEA01668.1| protein of unknown function DUF1446 [Burkholderia sp. H160] Length = 452 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 310/448 (69%), Positives = 357/448 (79%) Query: 4 DPQRTVRIGAGAGYSGDRIEPAAELAAHGQLDYLIFECLAERTIAIGQQARLADPGKGYD 63 +P R VRIGAGAGYSGDRIEPA ELA HGQLDYL+FECLAERTIAI QQAR DP GYD Sbjct: 5 EPHRVVRIGAGAGYSGDRIEPALELAEHGQLDYLVFECLAERTIAIAQQARSKDPELGYD 64 Query: 64 PLLAERMHAVLKTCATQGIRIITNMGAANPLAAAQRVREIARELGLSGLKVAAVAGDDVL 123 PLL RM AVL A G+RI++NMGAANPLAAA+R +IA ELGL GLK+AAV GDDVL Sbjct: 65 PLLEARMRAVLPVAARNGVRIVSNMGAANPLAAARRTAQIAGELGLGGLKIAAVTGDDVL 124 Query: 124 EAVQQDEWRIEDNGQPVASLGESLISANAYLGIAPIVEALQAGAQVIITGRVADPALVLA 183 + V+ + ++G+ VA+ + LISANAYLG + IVEAL AGAQ+++TGRVADP+L +A Sbjct: 125 DVVRAGNFHFVESGEAVAAYEDRLISANAYLGASGIVEALAAGAQIVLTGRVADPSLFVA 184 Query: 184 PLVHEFGWAPDDWDKLGQGTLIGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVKA 243 PL+HEFGW DDW LGQ T+IGHLLECAGQITGGYFADPG KDV LARLGFPI EV+ Sbjct: 185 PLIHEFGWRMDDWPLLGQATVIGHLLECAGQITGGYFADPGFKDVPNLARLGFPIAEVER 244 Query: 244 DGSAIITKVAGSGGQVTARTCKEQLLYEIHDPSAYFTPDVIADFSQVRIEEVGPDRVAVT 303 DGS +ITK+A SGG VT TCKEQLLYEIHDP Y PDV+ADFSQVRI + PDRV +T Sbjct: 245 DGSVVITKLAQSGGLVTEATCKEQLLYEIHDPRRYLQPDVVADFSQVRIAQEAPDRVRIT 304 Query: 304 GGRGRARPQTLKTTLGYRDSFIGEGQISYAGPGAQARAQLAGEIVRERLALTGVQTEELR 363 GG G R TLK ++ Y D +IGEGQISY GPGA ARA+LA +IVRERLALTGVQT ELR Sbjct: 305 GGSGTERTATLKVSVAYFDGYIGEGQISYGGPGALARARLALDIVRERLALTGVQTRELR 364 Query: 364 VDLIGINAIAGEQMSAHAPEPHEVRLRVTGRTASMKEAVRIGNEVETLYTNGPAGGGGAT 423 DLIG+NA+ G+ ++A EP+EVR RV GRTAS+ EA+RIGNEVETLYTNGPAGGGG T Sbjct: 365 FDLIGVNALHGDAVAAGHGEPYEVRARVAGRTASLAEAIRIGNEVETLYTNGPAGGGGVT 424 Query: 424 KSAREVIAVLSLLLPRTLVHPSVFIEEA 451 KS REV+AV S+LLPR P+V + EA Sbjct: 425 KSTREVVAVQSVLLPRAHATPAVSLVEA 452 >ref|YP_004231001.1| hypothetical protein BC1001_4552 [Burkholderia sp. CCGE1001] gb|ADX57941.1| protein of unknown function DUF1446 [Burkholderia sp. CCGE1001] Length = 452 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 306/446 (68%), Positives = 356/446 (79%) Query: 6 QRTVRIGAGAGYSGDRIEPAAELAAHGQLDYLIFECLAERTIAIGQQARLADPGKGYDPL 65 QR VRIGAGAGYSGDRIEPA ELA HG LDYL+FECLAERTIAI QQAR +P GYDPL Sbjct: 7 QRVVRIGAGAGYSGDRIEPAVELAEHGALDYLVFECLAERTIAIAQQARSKEPELGYDPL 66 Query: 66 LAERMHAVLKTCATQGIRIITNMGAANPLAAAQRVREIARELGLSGLKVAAVAGDDVLEA 125 L RM AVL G+RI++NMGAANPLAAAQ+ EIAR LGL +K+AAV GDDVL+A Sbjct: 67 LETRMKAVLPAALRNGVRIVSNMGAANPLAAAQKTAEIARALGLGDIKIAAVTGDDVLDA 126 Query: 126 VQQDEWRIEDNGQPVASLGESLISANAYLGIAPIVEALQAGAQVIITGRVADPALVLAPL 185 V+ ++R E++G+ VA L+SANAYLG IVEAL AGAQ+++TGRVADP+L +APL Sbjct: 127 VRAGDYRFEESGERVADYDTRLVSANAYLGAGAIVEALAAGAQIVLTGRVADPSLFVAPL 186 Query: 186 VHEFGWAPDDWDKLGQGTLIGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVKADG 245 +HEF W DDW LGQ T+IGHLLECAGQITGGYFADPG KDV LARLGFPIGEV DG Sbjct: 187 IHEFSWRMDDWRTLGQATVIGHLLECAGQITGGYFADPGFKDVPSLARLGFPIGEVGPDG 246 Query: 246 SAIITKVAGSGGQVTARTCKEQLLYEIHDPSAYFTPDVIADFSQVRIEEVGPDRVAVTGG 305 + +ITK+A +GG+VT TCKEQLLYEIHDP Y PDV+ADFSQVRIE+ G DRV V+GG Sbjct: 247 AVVITKLAKAGGRVTEATCKEQLLYEIHDPQRYLQPDVVADFSQVRIEQEGADRVRVSGG 306 Query: 306 RGRARPQTLKTTLGYRDSFIGEGQISYAGPGAQARAQLAGEIVRERLALTGVQTEELRVD 365 G R TLK ++ Y D +IGEGQISYAGP A ARA+LA EIVRERLALTGV+T+ELR D Sbjct: 307 NGTPRTGTLKVSVAYFDGYIGEGQISYAGPSAVARARLALEIVRERLALTGVKTQELRFD 366 Query: 366 LIGINAIAGEQMSAHAPEPHEVRLRVTGRTASMKEAVRIGNEVETLYTNGPAGGGGATKS 425 LIG+NA+ GE ++A P+EVR RV+GRTAS+++AVRIGNEVETLYTNGPAGGGG KS Sbjct: 367 LIGVNALHGETLAADFAGPYEVRARVSGRTASLEQAVRIGNEVETLYTNGPAGGGGVVKS 426 Query: 426 AREVIAVLSLLLPRTLVHPSVFIEEA 451 REV+AV S+LLPR V P+ + EA Sbjct: 427 TREVVAVQSVLLPREHVKPAFTMVEA 452