BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1601.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004228459.1| hypothetical protein BC1001_1970 [Burkholder... 221 5e-56 ref|YP_001563326.1| hypothetical protein Daci_2303 [Delftia acid... 173 2e-41 ref|YP_002362282.1| hypothetical protein Msil_1977 [Methylocella... 167 2e-39 ref|YP_001846518.1| hypothetical protein ACICU_01859 [Acinetobac... 157 9e-37 ref|ZP_06684667.1| conserved hypothetical protein [Achromobacter... 84 1e-14 >ref|YP_004228459.1| hypothetical protein BC1001_1970 [Burkholderia sp. CCGE1001] gb|ADX55399.1| hypothetical protein BC1001_1970 [Burkholderia sp. CCGE1001] Length = 252 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 117/238 (49%), Positives = 155/238 (65%), Gaps = 4/238 (1%) Query: 4 KFPLSLLQAVSDWQRSSNKARAQK----LKAECAALPAEFRTCLLVCYRQIALPKGGVWN 59 +F L LLQAV+DWQ ++ A+K L+ C +LP EF+ VC+RQIAL K VW+ Sbjct: 5 EFSLPLLQAVNDWQLGGDEKTARKRGLALRDACESLPPEFKAVPSVCFRQIALGKRSVWD 64 Query: 60 LIGEDCLPEKISSWTLDIEVAKAFKGGVPPDGQGFQGTILYLYPPHGSVIVNLSKLFRDS 119 L+GE L EKISSWTLD+ +AK FKGGVPP+GQGFQG I G V+VNL L+RD+ Sbjct: 65 LLGEMSLAEKISSWTLDLTLAKDFKGGVPPEGQGFQGVIFERAAASGEVVVNLWALYRDA 124 Query: 120 AFLDAMEKNKSCITGYQDGAGRYKNGQSEVVLEIDAVTPEDIYSLGGHSSPLEDLVAQAA 179 F +A++++K I+ Y G GRY N QSEVVL IDA+ +DI+SLGGHSS ++LV +AA Sbjct: 125 RFQEAIDRHKGSISRYHAGIGRYGNTQSEVVLRIDALDEDDIHSLGGHSSSFDELVGKAA 184 Query: 180 DLVYRRPATTAERQQLLLDATQAGVSGGPGWLNMDATRRVLARTKPHAEVLREVKRQQ 237 +Y T ++ +L + G WL D+T RVLAR +P A LRE++R Q Sbjct: 185 FTIYGGLPTASQVAELKAQVRELAPVAGARWLERDSTHRVLARIRPRASELREIQRHQ 242 >ref|YP_001563326.1| hypothetical protein Daci_2303 [Delftia acidovorans SPH-1] gb|ABX34941.1| hypothetical protein Daci_2303 [Delftia acidovorans SPH-1] Length = 272 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 131/240 (54%), Gaps = 6/240 (2%) Query: 5 FPLSLLQAVSDWQRS-----SNKARAQKLKAECAALPAEFRTCLLVCYRQIALPKGGVWN 59 F L+QAVSDWQR RA L+ C LP E+R L CYRQ++L K GVW Sbjct: 16 FTPELIQAVSDWQRKPRDRMQRHKRALALQEHCFKLPNEYRQTSLTCYRQMSLDKKGVWK 75 Query: 60 LIGEDCLPEKISSWTLDIEVAKAFKGGVPPDGQGFQGTILYLYPPHGSVIVNLSKLFRDS 119 L+G L E++SSWTLD+ AKA GGVP G+Q I ++P V+VNL L D Sbjct: 76 LLGHQSLDEQVSSWTLDMGFAKALLGGVPQVATGYQEVIFAIFPKPDQVVVNLKMLLDDE 135 Query: 120 AFLDAMEKNKSCITGYQDGAGRYKNGQSEVVLEIDAVTPEDIYSLGGHSSPLEDLVAQAA 179 F A+E +K+ I + +G G+YKN QSE+VL + + DI+S GG SS E+LV A Sbjct: 136 EFKQAVEAHKAEINFFSEGLGKYKNDQSEIVLNVGELLEADIWSFGGRSSSFEELVKLAF 195 Query: 180 DLVY-RRPATTAERQQLLLDATQAGVSGGPGWLNMDATRRVLARTKPHAEVLREVKRQQD 238 ++ R P E + ++ G WL ++T VL R +P A+ L K +++ Sbjct: 196 LHIHNREPRDEQELSVFRAENSEMECHAGASWLTHESTLNVLRRVRPQADELLARKEKEE 255 >ref|YP_002362282.1| hypothetical protein Msil_1977 [Methylocella silvestris BL2] gb|ACK50920.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 219 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 6/211 (2%) Query: 28 LKAECAALPAEFRTCLLVCYRQIALPKGGVWNLIGEDCLPEKISSWTLDIEVAKAFKGGV 87 +K + + FR+C L+ YRQ+AL KGGVW LI E LPEKIS+WTL +AK FKGGV Sbjct: 1 MKELAEGIDSRFRSCGLITYRQVALDKGGVWKLIAERSLPEKISAWTLAPSIAKTFKGGV 60 Query: 88 PPDGQGFQGTILYLYPPHGSVIVNLSKLFRDSAFLDAMEKNKSCITGYQDGAGRYKNGQS 147 PP +G+QGTI + P +VI+NL L++ F A+E+ S I G+ DGAGRY+N Q+ Sbjct: 61 PP--EGWQGTIFEIMPEPEAVILNLHALYQSPDFCGALERESSAIDGFWDGAGRYRNTQA 118 Query: 148 EVVLEIDAVTPEDIYSLGGHSSPLEDLVAQAADLVYRRPATTAERQQLLLDATQAGVSGG 207 EVVL ID + +Y+LGG+SS + L+ +++ + T +AG G Sbjct: 119 EVVLGIDNLDRASVYALGGYSSDRDTLIR----MMFDQEPTQELIAWFETQQKKAGFELG 174 Query: 208 PGWLNMDATRRVLARTKPHAEVLREVKRQQD 238 WL+ + +RVLAR +PH L+ +K QD Sbjct: 175 AFWLDGEPLQRVLARMEPHIARLKPIKAAQD 205 >ref|YP_001846518.1| hypothetical protein ACICU_01859 [Acinetobacter baumannii ACICU] ref|ZP_08443302.1| hypothetical protein HMPREF0022_02938 [Acinetobacter baumannii 6014059] gb|ACC57171.1| hypothetical protein ACICU_01859 [Acinetobacter baumannii ACICU] gb|ADX03956.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2] gb|ADX92500.1| hypothetical protein ABTW07_2071 [Acinetobacter baumannii TCDC-AB0715] gb|EGJ67304.1| hypothetical protein HMPREF0022_02938 [Acinetobacter baumannii 6014059] gb|EGK46685.1| hypothetical protein AB210_2753 [Acinetobacter baumannii AB210] gb|EGT90341.1| hypothetical protein ABNIH1_15476 [Acinetobacter baumannii ABNIH1] gb|EGT97904.1| hypothetical protein ABNIH3_09298 [Acinetobacter baumannii ABNIH3] gb|AEP06501.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06] Length = 235 Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 132/222 (59%), Gaps = 9/222 (4%) Query: 5 FPLSLLQAVSDWQRSSNKARAQKLKAECAALPAEFRTCL--LVCYRQIALPKGGVWNLIG 62 + L LLQA+S+WQ SN+ + KLK C LP +FR LV +RQI+L G+ + Sbjct: 10 YNLELLQAISNWQAGSNEKKGNKLKELCVNLPEKFRLLPPNLVLFRQISLDNVGLSRFLR 69 Query: 63 EDCLPEKISSWTLDIEVAKAFKGGVPPDGQGFQGTILYLYPPHGSVIVNLSKLFRDSAFL 122 E LPEKISSWT D + A+ FKGGVP + F+ TI P + VIV+LS+L++ S F Sbjct: 70 EKKLPEKISSWTTDYKFAEKFKGGVPSELGDFKATIFKTTPLNNQVIVSLSELYKCSDFC 129 Query: 123 DAMEKNKSCITGYQDGAGRYKNGQSEVVLEIDAVTPEDIYSLGGHSSPLEDLVAQAA-DL 181 +AM+ NK+ I Y DGAG+Y + QSEV++ + + +IYS+GG+S E + QA+ + Sbjct: 130 NAMKLNKNKIDRYHDGAGKYWDTQSEVIMATEYLDHSNIYSMGGYSGTPEQIAEQASREK 189 Query: 182 VYRRPATTAERQQLLLDATQAGVSGGPGWLNMDATRRVLART 223 T + ++L D GP WL+ + TRR +ART Sbjct: 190 NIPISLTIDDIKELSRDYI------GPWWLSPEGTRRAVART 225 >ref|ZP_06684667.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF78393.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 249 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 31/233 (13%) Query: 5 FPLSLLQAVSDWQRSSNKARAQK------LKAECAALPAEFRTCLLVCYRQIALPKGGVW 58 F L+A+ WQ + +A+K L E A+LP +RT C+R+ + KG + Sbjct: 4 FTDEFLEALGAWQNGWGEDQARKDILALALTTEAASLPLRYRTVSEPCFRKRFIHKGEMV 63 Query: 59 NLIGEDCLPEKISSWTLDIEVAKAFKGGVPPDGQGFQGTILYLYPPHGSVIVNLSKLFRD 118 ++ ++ E ++SWT D+ A+ KG V + I P +VIVNL+ L+ D Sbjct: 64 EILLDNSRDEGLASWTTDLRFAERMKGLVRTN--AVAAAIFQHCPTDANVIVNLTALWAD 121 Query: 119 SAFLDAMEKNKSCITGYQDGAGR-------YKNGQSEVVLEIDAVTPEDIYSLGGHSSPL 171 AF ++++ Y D GR +++ QSEVVL++ + +I +L G SSP Sbjct: 122 PAFTNSVQ-------AYSDRGGRFATALLNFRDSQSEVVLQV-PLRGSEIVALSGASSPF 173 Query: 172 EDLVAQAADLVYRRPATTAERQQLLLDATQAG-VSGGPGWLNMDATRRVLART 223 +DL +AA +R ++ + G G P ++ +A++RV++R+ Sbjct: 174 DDLCDRAA-------IPEHDRDRVFKHLLETGSYPGDPQYIGAEASQRVISRS 219