BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1600.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEJ55950.1| yeeC-like protein [Escherichia coli UMNF18] 651 0.0 gb|EGX17057.1| yeeC-like protein [Escherichia coli TX1999] 649 0.0 ref|YP_003940636.1| hypothetical protein Entcl_1082 [Enterobacte... 620 e-175 ref|ZP_01768219.1| conserved hypothetical protein [Burkholderia ... 592 e-167 ref|YP_789388.1| hypothetical protein PA14_15600 [Pseudomonas ae... 574 e-162 >gb|AEJ55950.1| yeeC-like protein [Escherichia coli UMNF18] Length = 392 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 327/390 (83%), Positives = 358/390 (91%) Query: 49 MSNSDLDALAAELADFALPEKKGGRPASEERVIAGFEEIQRFTEQHGRAPLHGEDRDIFE 108 M+NSDLD LAAELA+FA PEKK GRPASEER+IAGFEEIQRFTEQHGR P HGE+RDIFE Sbjct: 1 MNNSDLDDLAAELAEFAPPEKKKGRPASEERIIAGFEEIQRFTEQHGRVPQHGEERDIFE 60 Query: 109 RLYAVRLDRLRALPDCRALLEPLDHQGLLSGTPNVAASADETIDIDDLAAELAGGGGADG 168 RLYAVRLDRLR+LPDCRALLEPLDHQGLL+G +VA SADE IDID+LAAELA D Sbjct: 61 RLYAVRLDRLRSLPDCRALLEPLDHQGLLAGGGDVAESADEIIDIDNLAAELADVSSEDD 120 Query: 169 ITVLRHVRTSAEKRAAEEIADRKSCEDFELFKPKFDQVRSDLNSGVRVTRPFGEYSAIEV 228 ITVLRHVR S EKR + +ADRK CEDF+ FKP F+QVR+DL+SG+RVTRPFG+Y+ IEV Sbjct: 121 ITVLRHVRASTEKRVVQGVADRKPCEDFDAFKPLFEQVRNDLSSGLRVTRPFGQYATIEV 180 Query: 229 GQWFILDGQTAYVAGEGEEFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDEAARR 288 G WFILDGQTAYV+ EGEEFDSPQGKKDARLRVI+SNGTESNLLRLSLVRALYKDE ARR Sbjct: 181 GHWFILDGQTAYVSEEGEEFDSPQGKKDARLRVIYSNGTESNLLRLSLVRALYKDETARR 240 Query: 289 ITDPDMGPLFSDSLEEGDLESGTIYVLRSLSDNPYVAQHRELIHKIGVTGNKVETRIANA 348 ITDPDMGPLFSD+LEE DLESGTIYVLRSLSDNPYVA+HR++IHKIGVTG KVETRIANA Sbjct: 241 ITDPDMGPLFSDALEESDLESGTIYVLRSLSDNPYVAEHRDVIHKIGVTGGKVETRIANA 300 Query: 349 EHEATYLLARVEVVATYKLAGINRTRMESLFHRLFAAARLNISINDRFGHPVQPEEWFLV 408 EH++TYLLA+VEVVA+YKLAGINRTRME+LFHRLFA ARLNI+INDRFGHPVQPEEWFLV Sbjct: 301 EHDSTYLLAKVEVVASYKLAGINRTRMENLFHRLFAPARLNITINDRFGHPVQPEEWFLV 360 Query: 409 PLFVIDEAVARIKDGSITGYIYDPSAAKLV 438 PLFVIDEAVARIKDGSI GY+YDP +AKLV Sbjct: 361 PLFVIDEAVARIKDGSIIGYVYDPMSAKLV 390 >gb|EGX17057.1| yeeC-like protein [Escherichia coli TX1999] Length = 392 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 326/390 (83%), Positives = 357/390 (91%) Query: 49 MSNSDLDALAAELADFALPEKKGGRPASEERVIAGFEEIQRFTEQHGRAPLHGEDRDIFE 108 M+NSDLD LAAELA+FA PEKK GRPASEER+IAGFEEIQRFTEQHGR P HGE+RDIFE Sbjct: 1 MNNSDLDDLAAELAEFAPPEKKKGRPASEERIIAGFEEIQRFTEQHGRVPQHGEERDIFE 60 Query: 109 RLYAVRLDRLRALPDCRALLEPLDHQGLLSGTPNVAASADETIDIDDLAAELAGGGGADG 168 RLYAVRLDRLR+LPDCRALLEPLDHQGLL+G +VA SADE IDID+LAAELA D Sbjct: 61 RLYAVRLDRLRSLPDCRALLEPLDHQGLLAGGGDVAESADEIIDIDNLAAELADVSSEDD 120 Query: 169 ITVLRHVRTSAEKRAAEEIADRKSCEDFELFKPKFDQVRSDLNSGVRVTRPFGEYSAIEV 228 ITVLRHVR S EKR + +ADRK CEDF+ FKP F+QVR+DL+SG+RVTRPFG+Y+ IEV Sbjct: 121 ITVLRHVRASTEKRVVQGVADRKPCEDFDAFKPLFEQVRNDLSSGLRVTRPFGQYATIEV 180 Query: 229 GQWFILDGQTAYVAGEGEEFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDEAARR 288 G WFILDGQTAYV+ EGEEFDSPQGKKDARLRVI+SNGTESNLLRLSLVRALYKDE ARR Sbjct: 181 GHWFILDGQTAYVSEEGEEFDSPQGKKDARLRVIYSNGTESNLLRLSLVRALYKDETARR 240 Query: 289 ITDPDMGPLFSDSLEEGDLESGTIYVLRSLSDNPYVAQHRELIHKIGVTGNKVETRIANA 348 ITDPDMGPLFSD+LEE DLESGTIYVLRSLSDNPYVA+HR++IHKIGVTG KVE RIANA Sbjct: 241 ITDPDMGPLFSDALEESDLESGTIYVLRSLSDNPYVAEHRDVIHKIGVTGGKVEARIANA 300 Query: 349 EHEATYLLARVEVVATYKLAGINRTRMESLFHRLFAAARLNISINDRFGHPVQPEEWFLV 408 EH++TYLLA+VEVVA+YKLAGINRTRME+LFHRLFA ARLNI+INDRFGHPVQPEEWFLV Sbjct: 301 EHDSTYLLAKVEVVASYKLAGINRTRMENLFHRLFAPARLNITINDRFGHPVQPEEWFLV 360 Query: 409 PLFVIDEAVARIKDGSITGYIYDPSAAKLV 438 PLFVIDEAVARIKDGSI GY+YDP +AKLV Sbjct: 361 PLFVIDEAVARIKDGSIIGYVYDPMSAKLV 390 >ref|YP_003940636.1| hypothetical protein Entcl_1082 [Enterobacter cloacae SCF1] gb|ADO47352.1| hypothetical protein Entcl_1082 [Enterobacter cloacae SCF1] Length = 392 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 318/392 (81%), Positives = 344/392 (87%) Query: 49 MSNSDLDALAAELADFALPEKKGGRPASEERVIAGFEEIQRFTEQHGRAPLHGEDRDIFE 108 MSNSDLD LAAELA+FA PEKK G ASEERVIA FEEIQRF +QHGR P HGEDRDIFE Sbjct: 1 MSNSDLDDLAAELAEFAPPEKKKGYSASEERVIASFEEIQRFVKQHGRTPQHGEDRDIFE 60 Query: 109 RLYAVRLDRLRALPDCRALLEPLDHQGLLSGTPNVAASADETIDIDDLAAELAGGGGADG 168 RLYAVRLDRLR L ALL P+D QGLL+G VA AD ID+DDLAAELA + Sbjct: 61 RLYAVRLDRLRRLTSWHALLTPIDKQGLLAGEGVVAELADAIIDLDDLAAELADVTSEED 120 Query: 169 ITVLRHVRTSAEKRAAEEIADRKSCEDFELFKPKFDQVRSDLNSGVRVTRPFGEYSAIEV 228 ITVLRHVRTS EKRAA+ IADRK CEDF+ FKP F+QVRSDL+SG+RVTRPFG+Y+ IEV Sbjct: 121 ITVLRHVRTSTEKRAAKGIADRKPCEDFDTFKPLFEQVRSDLSSGLRVTRPFGQYATIEV 180 Query: 229 GQWFILDGQTAYVAGEGEEFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDEAARR 288 G WFILDGQTAYV+ EG EFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDE ARR Sbjct: 181 GHWFILDGQTAYVSEEGTEFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDETARR 240 Query: 289 ITDPDMGPLFSDSLEEGDLESGTIYVLRSLSDNPYVAQHRELIHKIGVTGNKVETRIANA 348 ITDPDMGPLFSDSLEE DLESGTIYVLRSLS+NPYVA+HR++IHKIGVTG KVETRIANA Sbjct: 241 ITDPDMGPLFSDSLEESDLESGTIYVLRSLSENPYVAEHRDVIHKIGVTGGKVETRIANA 300 Query: 349 EHEATYLLARVEVVATYKLAGINRTRMESLFHRLFAAARLNISINDRFGHPVQPEEWFLV 408 EH++TYLLA+VEVVA+YKLAGINRTRME+LFHRLFA ARLNI+I+DRFGHPVQPEEWFLV Sbjct: 301 EHDSTYLLAKVEVVASYKLAGINRTRMENLFHRLFAPARLNITIHDRFGHPVQPEEWFLV 360 Query: 409 PLFVIDEAVARIKDGSITGYIYDPSAAKLVNV 440 PLFVIDEAV RIKDGSI YIYDP AKLV + Sbjct: 361 PLFVIDEAVKRIKDGSIIEYIYDPMCAKLVKI 392 >ref|ZP_01768219.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gb|EBA47264.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 433 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 315/429 (73%), Positives = 353/429 (82%), Gaps = 2/429 (0%) Query: 12 SSRKSADAFLRSILRMRGSDAWPKAPPPLCVSRRRGAMSNSDLDALAAELADFALPEKKG 71 SS S R + R RG PKA PP C S +RG MSNSDLD LAAELA+FA PEKK Sbjct: 2 SSSASVVGLHRLLRRTRGKSTLPKALPPSCASGQRGVMSNSDLDDLAAELAEFAPPEKKN 61 Query: 72 GRPASEERVIAGFEEIQRFTEQHGRAPLHGEDRDIFERLYAVRLDRLRALPDCRALLEPL 131 GRPASEER+IAGFEEIQRFTE+HGRAP HGEDRDIFERLYAVRLDRLR LP+CRALLEPL Sbjct: 62 GRPASEERIIAGFEEIQRFTEKHGRAPQHGEDRDIFERLYAVRLDRLRTLPECRALLEPL 121 Query: 132 DHQGLLSGTPNVAASADETIDIDDLAAELAGGGGADGITVLRHVRTSAEKRAAEEIADRK 191 DHQGLL+G P VAASADETIDIDD+AAELA A+ ITVLRHVRTSAEKRAAEEIADRK Sbjct: 122 DHQGLLAGAPTVAASADETIDIDDIAAELADVADANDITVLRHVRTSAEKRAAEEIADRK 181 Query: 192 SCEDFELFKPKFDQVRSDLNSGVRVTRPF-GEYSAIEVGQWFILDGQTAYVAGEGEEFDS 250 CEDFE F+P F++V++++ +G+R ++P AIE G +F+LDG T YVA GE + Sbjct: 182 FCEDFETFRPLFERVQTEVKTGLRQSQPIEAGRRAIEAGDFFVLDGLTLYVAEVGEPLKT 241 Query: 251 PQGKKDARLRVIFSNGTESNLLRLSLVRALYKDEAARRITDPDMGPL-FSDSLEEGDLES 309 + D RLR+IFSNGTESNLL SL RA Y D AARR+ P+ G L F LE D+ES Sbjct: 242 TAREVDRRLRLIFSNGTESNLLLRSLQRAFYNDPAARRLASPEGGQLSFGGELEADDVES 301 Query: 310 GTIYVLRSLSDNPYVAQHRELIHKIGVTGNKVETRIANAEHEATYLLARVEVVATYKLAG 369 GTIYVLRSLSD+PYVAQHR++IHK+GVTG +VETRIANAEH++TYLLA+VEVVATYKLAG Sbjct: 302 GTIYVLRSLSDHPYVAQHRDIIHKMGVTGGRVETRIANAEHDSTYLLAKVEVVATYKLAG 361 Query: 370 INRTRMESLFHRLFAAARLNISINDRFGHPVQPEEWFLVPLFVIDEAVARIKDGSITGYI 429 INRTRME+LFHRLFA ARLNI+I DRFGHPVQPEEWFLVPLFVIDEAVARIKDGSITGYI Sbjct: 362 INRTRMENLFHRLFAPARLNITIKDRFGHPVQPEEWFLVPLFVIDEAVARIKDGSITGYI 421 Query: 430 YDPSAAKLV 438 YDP AAKLV Sbjct: 422 YDPQAAKLV 430 >ref|YP_789388.1| hypothetical protein PA14_15600 [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ13009.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 394 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 304/392 (77%), Positives = 336/392 (85%), Gaps = 2/392 (0%) Query: 49 MSNSDLDALAAELADFALPEKKGGRPASEERVIAGFEEIQRFTEQHGRAPLHGEDRDIFE 108 MSNSDLD LAAELA+FA PEKK GRPASEERVIAGFEEIQRFTEQHGRAP HGEDRDIFE Sbjct: 1 MSNSDLDDLAAELAEFAPPEKKNGRPASEERVIAGFEEIQRFTEQHGRAPQHGEDRDIFE 60 Query: 109 RLYAVRLDRLRALPDCRALLEPLDHQGLLSGTPNVAASADETIDIDDLAAELAGGGGADG 168 RLYAVRLDRLRALPDCR L+EPLDHQGLL+G VAASADETIDIDDLAAELA GAD Sbjct: 61 RLYAVRLDRLRALPDCRTLIEPLDHQGLLAGASTVAASADETIDIDDLAAELADVAGADD 120 Query: 169 ITVLRHVRTSAEKRAAEEIADRKSCEDFELFKPKFDQVRSDLNSGVRVTRPF-GEYSAIE 227 ITVLRHVRTSAEKRAAEE+ADRK CEDFE F+P F++V++++ +G+R ++P AIE Sbjct: 121 ITVLRHVRTSAEKRAAEEVADRKPCEDFETFRPLFERVQAEVKTGMRQSQPIEAGRRAIE 180 Query: 228 VGQWFILDGQTAYVAGEGEEFDSPQGKKDARLRVIFSNGTESNLLRLSLVRALYKDEAAR 287 G +F+LDG T YVA GE + G+ D RLR+IFSNGTESNLL SL RA Y D AAR Sbjct: 181 AGDFFVLDGLTLYVAEVGEPLKTTAGEVDRRLRLIFSNGTESNLLLRSLQRAFYNDPAAR 240 Query: 288 RITDPDMGPL-FSDSLEEGDLESGTIYVLRSLSDNPYVAQHRELIHKIGVTGNKVETRIA 346 R+ P+ G L F LE D+ESGTIYVLRSLSD+PYVAQHR++IHK+GVTG +VETRIA Sbjct: 241 RLASPESGQLSFGGELEADDVESGTIYVLRSLSDHPYVAQHRDIIHKMGVTGGRVETRIA 300 Query: 347 NAEHEATYLLARVEVVATYKLAGINRTRMESLFHRLFAAARLNISINDRFGHPVQPEEWF 406 NAE+EATYLLA+VEVVATYKLAGINR RME+LFHRLFA ARLNI+INDRFGHPVQPEEWF Sbjct: 301 NAENEATYLLAKVEVVATYKLAGINRIRMENLFHRLFATARLNITINDRFGHPVQPEEWF 360 Query: 407 LVPLFVIDEAVARIKDGSITGYIYDPSAAKLV 438 LVPLFVIDEAVARIKDGSITGYIYDP AAKLV Sbjct: 361 LVPLFVIDEAVARIKDGSITGYIYDPKAAKLV 392