BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1590.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775611.1| hypothetical protein Hsero_2204 [Herbaspiril...   134   4e-30
ref|YP_001353726.1| hypothetical protein mma_2036 [Janthinobacte...   108   2e-22
ref|YP_001099657.1| hypothetical protein HEAR1357 [Herminiimonas...   102   1e-20
ref|YP_004752011.1| hypothetical protein CFU_1356 [Collimonas fu...   102   3e-20
ref|YP_001857544.1| hypothetical protein Bphy_1316 [Burkholderia...    94   6e-18

>ref|YP_003775611.1| hypothetical protein Hsero_2204 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63703.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 101

 Score =  134 bits (337), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 76/96 (79%), Positives = 84/96 (87%)

Query: 1  MAEEAFLQVQLCYAAPGLQILQDLQVAPGSTIQQAILDSGLLREQPAIDLSVCKVGIFGK 60
          MA+ + LQVQLCYAAPGLQIL+DL+V  G TIQQAILDSGLLR+ PAIDLS CKVGIFGK
Sbjct: 1  MADVSVLQVQLCYAAPGLQILRDLEVQSGCTIQQAILDSGLLRQHPAIDLSACKVGIFGK 60

Query: 61 IKTLDTVLRARDRIEIYRPLIADPKQSRRRRAAHRE 96
          +K L+T LR RDRIEIYRPLIADPKQSRRRRA  +E
Sbjct: 61 VKPLETPLRQRDRIEIYRPLIADPKQSRRRRAQGKE 96


>ref|YP_001353726.1| hypothetical protein mma_2036 [Janthinobacterium sp. Marseille]
 gb|ABR90321.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 105

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/89 (60%), Positives = 71/89 (79%)

Query: 7  LQVQLCYAAPGLQILQDLQVAPGSTIQQAILDSGLLREQPAIDLSVCKVGIFGKIKTLDT 66
          + +Q+CYA P  Q L +  V  G+TIQQAI +SG++++ P ID+SV +VGI+GK+KTLDT
Sbjct: 11 IHIQICYARPDRQFLLEQTVTSGTTIQQAIQNSGIIQQAPEIDVSVWRVGIYGKLKTLDT 70

Query: 67 VLRARDRIEIYRPLIADPKQSRRRRAAHR 95
          VLR  DR+EIYRPLIADPK SRR+RA H+
Sbjct: 71 VLREHDRVEIYRPLIADPKDSRRKRADHK 99


>ref|YP_001099657.1| hypothetical protein HEAR1357 [Herminiimonas arsenicoxydans]
 emb|CAL61530.1| conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 106

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/92 (59%), Positives = 69/92 (75%)

Query: 5   AFLQVQLCYAAPGLQILQDLQVAPGSTIQQAILDSGLLREQPAIDLSVCKVGIFGKIKTL 64
           A + +Q+CYA    Q L D  V PG+TIQQAI  SG+++  P ID+SV +VGI+ K+KTL
Sbjct: 10  AAIHIQICYAREDKQFLLDQTVPPGTTIQQAIQGSGIIQLAPEIDVSVWRVGIYSKLKTL 69

Query: 65  DTVLRARDRIEIYRPLIADPKQSRRRRAAHRE 96
           DTVLR  DR+EIYRPLIADPK SRR+RA  R+
Sbjct: 70  DTVLREHDRVEIYRPLIADPKDSRRKRAESRD 101


>ref|YP_004752011.1| hypothetical protein CFU_1356 [Collimonas fungivorans Ter331]
 gb|AEK61188.1| UPF0125 protein yfjF [Collimonas fungivorans Ter331]
          Length = 108

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/91 (58%), Positives = 68/91 (74%)

Query: 2   AEEAFLQVQLCYAAPGLQILQDLQVAPGSTIQQAILDSGLLREQPAIDLSVCKVGIFGKI 61
            E   +Q+Q+CYA+PG+Q L+ L V  G+ +   I  SGLL E   IDLS  +VGI+GK+
Sbjct: 13  GEMLLIQIQVCYASPGVQALKQLSVPAGTLLHDGIKRSGLLEEIREIDLSCWRVGIYGKL 72

Query: 62  KTLDTVLRARDRIEIYRPLIADPKQSRRRRA 92
           KTLDTVLR +DR+EIYRPLIADP +SRR+RA
Sbjct: 73  KTLDTVLRDQDRVEIYRPLIADPMESRRKRA 103


>ref|YP_001857544.1| hypothetical protein Bphy_1316 [Burkholderia phymatum STM815]
 sp|B2JIA4|RNFH_BURP8 RecName: Full=Protein rnfH
 gb|ACC70498.1| protein of unknown function UPF0125 [Burkholderia phymatum
          STM815]
          Length = 110

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 51/93 (54%), Positives = 63/93 (67%)

Query: 5  AFLQVQLCYAAPGLQILQDLQVAPGSTIQQAILDSGLLREQPAIDLSVCKVGIFGKIKTL 64
          A L VQ+CYA PG Q L  LQ+ PG T++QAI  SG+L   P IDL+  K G++GK+K L
Sbjct: 3  AHLTVQVCYALPGEQTLIQLQLPPGVTLRQAIDASGVLTRHPEIDLTKHKTGVYGKLKPL 62

Query: 65 DTVLRARDRIEIYRPLIADPKQSRRRRAAHREQ 97
          D VL   DR+EIYRPLI DPK +R+RR     Q
Sbjct: 63 DAVLADHDRVEIYRPLIVDPKLARQRRVEKSRQ 95