BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1582.p (428 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775605.1| beta-lactamase class C protein [Herbaspirill... 508 e-142 ref|NP_864741.1| D-aminoacylase [Rhodopirellula baltica SH 1] >g... 189 8e-46 ref|ZP_01856075.1| D-aminoacylase [Planctomyces maris DSM 8797] ... 189 8e-46 gb|EGF24890.1| N-acyl-D-amino-acid deacylase [Rhodopirellula bal... 187 3e-45 ref|YP_004251950.1| beta-lactamase [Odoribacter splanchnicus DSM... 186 6e-45 >ref|YP_003775605.1| beta-lactamase class C protein [Herbaspirillum seropedicae SmR1] gb|ADJ63697.1| beta-lactamase class C protein [Herbaspirillum seropedicae SmR1] Length = 451 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 275/399 (68%), Positives = 320/399 (80%), Gaps = 2/399 (0%) Query: 22 LMLASVSVLAQESPD--MTAVAERVDQQMTQLLGQYPVPGASIAIAYQGKLVYQRGYGMA 79 ++L AQE+ + + RVD QM +LL YP+PGASIAIAYQG+LVYQRGYGMA Sbjct: 27 MLLPGCPTRAQETAPSPLQGLEARVDAQMGRLLAAYPIPGASIAIAYQGRLVYQRGYGMA 86 Query: 80 VTESNTPVTPLTRFRIGSVSKPVTAVAVLKLFEKELPQVLDRPVFGPEGLLPDAAYPDFA 139 VTE+ TPVTP TRFRIGS+SK VTA+A+LKLFE ELP+ L+R VFGP+GLLPD AYPDFA Sbjct: 87 VTETQTPVTPQTRFRIGSISKSVTAMAMLKLFEGELPEALERRVFGPDGLLPDTAYPDFA 146 Query: 140 QPLDQRVLKITLRELLQHTSGWGGSDYDPQYDLVNIAKARQVAAPASARDVIAYVLKQRL 199 QPLD+R LKITLR+LLQHT+GWG SDY+P DL +IA+ +V +PASA+DVIAYVLKQRL Sbjct: 147 QPLDRRALKITLRDLLQHTAGWGDSDYEPLDDLRHIAEVMKVKSPASAKDVIAYVLKQRL 206 Query: 200 LDAAPGTEFFYSNFAYNVLGRLVEQKSGMSYEEAVQALVFKPAAVEDAAIAGDRRIERAA 259 LDAAPGTEFFY NFAY VLGR++EQ+SG+ Y +AVQALV+ PA V DAAIA D R RAA Sbjct: 207 LDAAPGTEFFYDNFAYVVLGRIIEQRSGLPYAQAVQALVWHPAGVSDAAIAADGRAGRAA 266 Query: 260 NETVYYDDPRWPAVADRDGSGATGPESYSALHFKAMDATAGWIATAADLVHFADATQGRG 319 E VYYDD RWP V +G GA P+SY HF +MDATAGWIA+AADLV F DA QGR Sbjct: 267 GEAVYYDDARWPTVPVGEGEGAAAPQSYGVHHFSSMDATAGWIASAADLVQFVDAAQGRN 326 Query: 320 VAALLQPQTLALMKQRNPAQAENNYGLGWVVTRSNGVEILSHSGALTTGTYAYLQSRADG 379 LLQPQT+ALMKQR+P +N YGLGWV+TR+ GV+I+SHSGAL G+YAYLQSRADG Sbjct: 327 RPGLLQPQTVALMKQRHPRMPDNPYGLGWVLTRTGGVDIISHSGALPAGSYAYLQSRADG 386 Query: 380 WTWAVLMNRLPIPYPPEQGVSELQAFQVAVQRGLMNAIV 418 W+WAVL NR+P+ YPPEQ V LQAFQ AVQRGLM AIV Sbjct: 387 WSWAVLFNRMPVAYPPEQDVEGLQAFQAAVQRGLMAAIV 425 >ref|NP_864741.1| D-aminoacylase [Rhodopirellula baltica SH 1] emb|CAD72423.1| D-aminoacylase [Rhodopirellula baltica SH 1] Length = 958 Score = 189 bits (480), Expect = 8e-46, Method: Composition-based stats. Identities = 130/356 (36%), Positives = 186/356 (52%), Gaps = 20/356 (5%) Query: 44 VDQQMTQLLGQYPVPGASIAIAYQGKLVYQRGYGMAVTESNTPVTPLTRFRIGSVSKPVT 103 VD M L ++ +PGAS+AI + +VY RG+G A PVTP + FRI S+SKP+T Sbjct: 581 VDAVMQSFLREHRIPGASLAITDKNNVVYARGFGYADVGQCEPVTPESLFRIASISKPIT 640 Query: 104 AVAVLKLFEKELPQVLDRPVFGPEGLLPDAAYPDFAQPLDQRVLKITLRELLQHTSGWG- 162 AVA+L+L ++ LD VF +L + + +D+R +IT+ LLQH GW Sbjct: 641 AVAILQLVDQG-KLSLDDKVF---EILDHEPHVEEGSKIDERQDQITIEHLLQHRGGWDR 696 Query: 163 GSDYDPQYDLVNIAKARQVAAPASARDVIAYVLKQRLLDAAPGTEFFYSNFAYNVLGRLV 222 +D + A A + PA+ D I V++ + LD PG + YSN+ Y +LGR++ Sbjct: 697 DQSFDAMFRSTQFANALGASHPATP-DTIIRVMRGKPLDFDPGERYAYSNYGYCLLGRVI 755 Query: 223 EQKSGMSYEEAVQALVFKPAAVEDAAIAGDRRIERAANETVYYDDPRWPAVADRDGSGAT 282 E+ SG +YE+ VQ V +P V ++ R R NE YYD + +V +D + Sbjct: 756 EKISGEAYEDYVQQHVLQPIGVTSMSVGATRLEGRKPNEVRYYDPHQGDSVFAKDLNSRV 815 Query: 283 GPESYSALHFKAMDATAGWIATAADLVHFADA----------TQGRGVAALLQPQTLALM 332 P++Y A H +AMD+ WIA+A+DL FA A + R +P LA Sbjct: 816 -PQTYGAWHLEAMDSHGAWIASASDLARFASAFDDHENSPLLSSARITDMFARPDGLAGH 874 Query: 333 KQRNPAQAENNYGLGW-VVTRSNGVEILSHSGALTTGTYAYLQSRADGWTWAVLMN 387 K +N A YG GW VVT +G SH G+L GT L R+DG A+L N Sbjct: 875 K-KNGAPKSKYYGQGWSVVTDESGELTASHGGSL-PGTNTILVRRSDGKNVALLFN 928 >ref|ZP_01856075.1| D-aminoacylase [Planctomyces maris DSM 8797] gb|EDL57982.1| D-aminoacylase [Planctomyces maris DSM 8797] Length = 689 Score = 189 bits (480), Expect = 8e-46, Method: Composition-based stats. Identities = 125/374 (33%), Positives = 201/374 (53%), Gaps = 26/374 (6%) Query: 33 ESPD---MTAVAER----VDQQMTQLLGQYPVPGASIAIAYQGKLVYQRGYGMAVTESNT 85 +SPD MT + ++ +DQ + + + PG ++A++Y+G+LVY RG+G A E+ Sbjct: 286 KSPDAIPMTGLDQKELASLDQSIKDFMMLHNPPGVAVAVSYRGRLVYARGFGYADKETEE 345 Query: 86 PVTPLTRFRIGSVSKPVTAVAVLKLFEKELPQVLDRPVFGPEGLLPDAAYPDFAQPLDQR 145 V P ++FRI S+SKP+TAV ++KL E+ + LD VF +L + +D R Sbjct: 346 LVQPDSQFRIASISKPITAVGIMKLVEQGKLK-LDSRVF---DILKQYRRSLSQKEVDPR 401 Query: 146 VLKITLRELLQHTSGWGGSD-YDPQYDLVNIAKARQVAAPASARDVIAYVLKQRLLDAAP 204 + IT+++LL HT+GW + +DP + + AK + APA D+I +LK LD+ P Sbjct: 402 LKDITVQQLLNHTAGWDREESFDPMFRSITFAKQVEKPAPAEIDDIIRIMLKHP-LDSKP 460 Query: 205 GTEFFYSNFAYNVLGRLVEQKSGMSYEEAVQALVFKPAAVEDAAIAGDRRIERAANETVY 264 G + YSNF Y +LGR++E+ SG +YE+ +Q + KP + + + +R+ E Y Sbjct: 461 GERYAYSNFGYCLLGRVIEEVSGQTYEDYIQQTICKPLHMNETQLGKTLLEDRSEKEVKY 520 Query: 265 YDDPRWPAVADRDGSGATGPESYSALHFKAMDATAGWIATAADLVHFADATQGRGVAALL 324 + + R +V + P Y A + +AMD+ GWI++A DL+ FA A + +L Sbjct: 521 HSNLRGSSVFAANLRKQV-PSPYGAWYLEAMDSHGGWISSAPDLLRFATAFDVPDRSPIL 579 Query: 325 QPQTLALMKQRNPAQA---------ENNYGLGWVV--TRSNGVEILSHSGALTTGTYAYL 373 + T++LM +R P A + Y GW+V + G H+G+L GT L Sbjct: 580 KAPTISLMLERPPGLAGFDEQGQPKDAYYACGWMVRPIDTAGNSNQWHAGSL-DGTSTLL 638 Query: 374 QSRADGWTWAVLMN 387 R D WA+L N Sbjct: 639 VRRLDRINWAILFN 652 >gb|EGF24890.1| N-acyl-D-amino-acid deacylase [Rhodopirellula baltica WH47] Length = 947 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 184/356 (51%), Gaps = 20/356 (5%) Query: 44 VDQQMTQLLGQYPVPGASIAIAYQGKLVYQRGYGMAVTESNTPVTPLTRFRIGSVSKPVT 103 VD M L ++ +PGAS+AI + +VY RG+G A P TP + FRI S+SKP+T Sbjct: 566 VDAVMQSFLREHRIPGASLAITDKSNVVYARGFGYADVGQREPATPESLFRIASISKPIT 625 Query: 104 AVAVLKLFEKELPQVLDRPVFGPEGLLPDAAYPDFAQPLDQRVLKITLRELLQHTSGWG- 162 AVA+L+L ++ LD VF +L + + +D+R +IT+ LLQH GW Sbjct: 626 AVAILQLVDQG-KLSLDDKVF---EILDHEPHVEEGSKIDERQDQITIEHLLQHRGGWDR 681 Query: 163 GSDYDPQYDLVNIAKARQVAAPASARDVIAYVLKQRLLDAAPGTEFFYSNFAYNVLGRLV 222 +D + A A + PA+ D I V++ + LD PG + YSN+ Y +LGR++ Sbjct: 682 DQSFDAMFRSTQFANALGASHPATP-DTIIRVMRGKPLDFDPGERYAYSNYGYCLLGRVI 740 Query: 223 EQKSGMSYEEAVQALVFKPAAVEDAAIAGDRRIERAANETVYYDDPRWPAVADRDGSGAT 282 E+ SG +YE+ VQ V +P V ++ R R NE YYD + +V D + Sbjct: 741 EKISGEAYEDYVQQHVLQPIGVTSMSVGATRLEGRKPNEVRYYDPHQSDSVFANDLNSRV 800 Query: 283 GPESYSALHFKAMDATAGWIATAADLVHFADA----------TQGRGVAALLQPQTLALM 332 P++Y A H +AMD+ WIA+A+DL FA A + R +P LA Sbjct: 801 -PQTYGAWHLEAMDSHGAWIASASDLARFASAFDDPENSPLLSSARITDMFARPDGLAGH 859 Query: 333 KQRNPAQAENNYGLGW-VVTRSNGVEILSHSGALTTGTYAYLQSRADGWTWAVLMN 387 K +N A YG GW VVT +G SH G+L GT L R+DG A+L N Sbjct: 860 K-KNGAPKSKYYGQGWSVVTDESGELTASHGGSL-PGTNTILVRRSDGKNVALLFN 913 >ref|YP_004251950.1| beta-lactamase [Odoribacter splanchnicus DSM 20712] gb|ADY31770.1| beta-lactamase [Odoribacter splanchnicus DSM 20712] Length = 447 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 119/367 (32%), Positives = 188/367 (51%), Gaps = 13/367 (3%) Query: 22 LMLASVSVLAQESPDMTAVAERVDQQMTQLLGQYPVPGASIAIAYQGKLVYQRGYGMAVT 81 LML + + + + + D+ + + + ++ + GAS A+ +L+Y +GYG A Sbjct: 46 LMLFPANQVINNNDSELDITLKFDRIIRKFMQKWEIKGASFALMKDDRLIYSKGYGFADE 105 Query: 82 ESNTPVTPLTRFRIGSVSKPVTAVAVLKLFEKELPQVLDRPVFGPEGLLPDAAYPDFAQP 141 E N P+ + FRI S+SK +TAVA++KL E+ + DR VFGPEG+L D + D P Sbjct: 106 EENVPMDVMHVFRIASISKLITAVAIMKLQEEGKLTLQDR-VFGPEGILNDTIFSDIKDP 164 Query: 142 LDQRVLKITLRELLQHTSGWGGSDYDPQYDLVNIAKARQVAAPASARDVIAYVLKQRLLD 201 R KIT+ LL+H G+ + DP + V IA+ QV PA +I +VL +RL Sbjct: 165 ---RTTKITVENLLRHQGGFSIAYGDPMFCPVEIARKMQVPPPADLNTMIRFVLSRRL-G 220 Query: 202 AAPGTEFFYSNFAYNVLGRLVEQKSGMSYEEAVQALVFKPAAVEDAAIAGDRRIERAANE 261 PG+ YSN Y +L +++E+ SG YE V+ + +PA D + + ++ NE Sbjct: 221 FTPGSGARYSNIGYGILSKVIEKVSGEDYELYVKRHILRPAGCFDMHLGKNLYDDKLPNE 280 Query: 262 TVYYDDPRWPAVADRDGSGATGPESYSALHFKAMDATAGWIATAADLVHF-ADATQGRGV 320 YY+ + DGSG S + + + GW+A+ A+L+ F A + G+ Sbjct: 281 VKYYEVSNAEQIQACDGSGKLVARSNGGNNIEELYGAGGWVASPAELLRFLAVIDKDPGI 340 Query: 321 AALLQPQTLALMKQRNPAQAENNYGLGWVVTRSNGVEILSHSGALTTGTYAYLQSRADGW 380 LL ++ M Q P+ Y +GW+ T S G SG L GT A ++ + DG+ Sbjct: 341 PDLLSDASIDYMTQEVPSA----YPIGWIETTSRGEWF--RSGTL-AGTSALMKKQKDGY 393 Query: 381 TWAVLMN 387 +W L N Sbjct: 394 SWVFLTN 400