BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1566.p (390 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775591.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 637 e-180 ref|YP_001353742.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 533 e-149 ref|YP_001099641.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 527 e-147 ref|ZP_08275641.1| 1-deoxy-D-xylulose 5-phosphate reductoisomera... 518 e-145 ref|YP_004751992.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 508 e-142 >ref|YP_003775591.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Herbaspirillum seropedicae SmR1] gb|ADJ63683.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 637 bits (1642), Expect = e-180, Method: Composition-based stats. Identities = 359/390 (92%), Positives = 369/390 (94%) Query: 1 MQSISILGATGSIGVSTLDVVARHPDRYRVFALSAHSRVAELAEQCQRFRPQVAVVGSAE 60 MQSISILG+TGSIGVSTLDVVARHPDRYRV+ALSAHSRVAELA+QC +FRPQVAVVG+A Sbjct: 1 MQSISILGSTGSIGVSTLDVVARHPDRYRVYALSAHSRVAELAQQCAQFRPQVAVVGTAA 60 Query: 61 AAAQLQTLLRAAGLSTEVAYGPQALCDIASADGCDMVMAAIVGAAGLASTLAAARAGKKI 120 AAA+LQ LL A + TEVAYGPQALCDIASA+GCDMVMAAIVGAAGLASTLAAARAGKKI Sbjct: 61 AAAELQFLLAARAIKTEVAYGPQALCDIASANGCDMVMAAIVGAAGLASTLAAARAGKKI 120 Query: 121 LLANKEALVISGQLLMDAVQAHGASLLPIDSEHNAIFQCLPAGYTRSMTAHGVEKILLTA 180 LLANKEALVISGQLLMDAV AHGASLLPIDSEHNAIFQCLP GYTRSM+AHGVEKILLTA Sbjct: 121 LLANKEALVISGQLLMDAVAAHGASLLPIDSEHNAIFQCLPPGYTRSMSAHGVEKILLTA 180 Query: 181 SGGPFLHRDVNTLDQVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK 240 SGGPFL RDV TLD VTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK Sbjct: 181 SGGPFLTRDVGTLDTVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK 240 Query: 241 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAALDLAQIAQL 300 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVA LDLAQIAQL Sbjct: 241 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAPLDLAQIAQL 300 Query: 301 SFLPPDYQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLDGRIGFGKIAPLIQEVMS 360 SF PD+QRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFL RIGFGKIAPLI EVMS Sbjct: 301 SFSEPDFQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLGRRIGFGKIAPLIDEVMS 360 Query: 361 AIPNRQADDITALLEQDRQARDHAEALISR 390 AIPNRQADDI ALLEQDRQAR HAE LISR Sbjct: 361 AIPNRQADDIDALLEQDRQARSHAEHLISR 390 >ref|YP_001353742.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Janthinobacterium sp. Marseille] sp|A6SZP5|DXR_JANMA RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase gb|ABR88508.1| 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Janthinobacterium sp. Marseille] Length = 390 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 289/388 (74%), Positives = 328/388 (84%) Query: 1 MQSISILGATGSIGVSTLDVVARHPDRYRVFALSAHSRVAELAEQCQRFRPQVAVVGSAE 60 MQ I+ILG+TGS+GVSTLDV+ARHPDRY V+AL+A S+V ELA+QC RF+PQVAVVGSAE Sbjct: 1 MQQITILGSTGSVGVSTLDVIARHPDRYSVYALTAQSKVEELAQQCARFKPQVAVVGSAE 60 Query: 61 AAAQLQTLLRAAGLSTEVAYGPQALCDIASADGCDMVMAAIVGAAGLASTLAAARAGKKI 120 AA +LQ LL A GL T+V YG ALC +ASA CD VMAAIVGAAGLA TLAAAR+GK++ Sbjct: 61 AAKKLQVLLDAQGLHTQVGYGEAALCAVASAPECDSVMAAIVGAAGLAPTLAAARSGKRV 120 Query: 121 LLANKEALVISGQLLMDAVQAHGASLLPIDSEHNAIFQCLPAGYTRSMTAHGVEKILLTA 180 LLANKEALV+SG LLM+AV A GA L+PIDSEHNAIFQC+PA R+ AHGVEKILLTA Sbjct: 121 LLANKEALVMSGPLLMEAVAASGAILMPIDSEHNAIFQCMPATCQRTPLAHGVEKILLTA 180 Query: 181 SGGPFLHRDVNTLDQVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK 240 SGGPFL RDVNTLDQV+ +EAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLF PA++ Sbjct: 181 SGGPFLKRDVNTLDQVSWQEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFDLPAER 240 Query: 241 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAALDLAQIAQL 300 IEVVIHPQSV+HSMVSY DGSVLAQLGNPDMRTPIA+ALAYPERI+SGV +DL QIAQL Sbjct: 241 IEVVIHPQSVVHSMVSYVDGSVLAQLGNPDMRTPIAHALAYPERISSGVPPIDLIQIAQL 300 Query: 301 SFLPPDYQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLDGRIGFGKIAPLIQEVMS 360 SF PD+ RFPCLKLAYDAL+AGG+ AI+NAANE+AVQAFLD RIGF I LI VM Sbjct: 301 SFERPDFLRFPCLKLAYDALQAGGSAPAIMNAANEIAVQAFLDSRIGFRAIDQLIARVMD 360 Query: 361 AIPNRQADDITALLEQDRQARDHAEALI 388 +P+ DI ++ QDR AR+ A + I Sbjct: 361 VMPSVAITDIESVFAQDRCARELANSFI 388 >ref|YP_001099641.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Herminiimonas arsenicoxydans] sp|A4G4S7|DXR_HERAR RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase emb|CAL61514.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) [Herminiimonas arsenicoxydans] Length = 391 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 289/391 (73%), Positives = 325/391 (83%), Gaps = 3/391 (0%) Query: 1 MQSISILGATGSIGVSTLDVVARHPDRYRVFALSAHSRVAELAEQCQRFRPQVAVVGSAE 60 MQ I+ILG+TGSIGVSTLDVVARHPDRYRV AL+A ++V ELA QC +F P VAVVGSAE Sbjct: 1 MQHITILGSTGSIGVSTLDVVARHPDRYRVHALTAQNKVEELAAQCAQFHPDVAVVGSAE 60 Query: 61 AAAQLQTLLRAAGLSTEVAYGPQALCDIASADGCDMVMAAIVGAAGLASTLAAARAGKKI 120 AA +LQ LL GL T+V YG ALC +ASA CD VMAAIVG AGLA TLAAARAGKKI Sbjct: 61 AAQKLQVLLNGMGLQTQVEYGAAALCTVASAPECDCVMAAIVGGAGLAPTLAAARAGKKI 120 Query: 121 LLANKEALVISGQLLMDAVQAHGASLLPIDSEHNAIFQCLPAGYTRSM---TAHGVEKIL 177 LLANKEALV+SG LLM+AV A GA L+PIDSEHNAIFQC+PA Y + HG+EKIL Sbjct: 121 LLANKEALVMSGPLLMEAVAASGAILMPIDSEHNAIFQCMPATYHQQQLTPAQHGIEKIL 180 Query: 178 LTASGGPFLHRDVNTLDQVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAP 237 LTASGGPFL+R ++TLDQVT EA+AHPKWVMGRKISVDSATMMNKGLEVIEAHWLFG P Sbjct: 181 LTASGGPFLNRALDTLDQVTCAEAIAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGVP 240 Query: 238 ADKIEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAALDLAQI 297 AD+IEVVIHPQSV+HSMVSY DGSVLAQLGNPDMRTPIA+A+AYPERI SGVA +DL +I Sbjct: 241 ADRIEVVIHPQSVVHSMVSYIDGSVLAQLGNPDMRTPIAHAMAYPERIDSGVAPIDLIKI 300 Query: 298 AQLSFLPPDYQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLDGRIGFGKIAPLIQE 357 AQL+F PD RFPCLKLAYDAL+AGG+ AI+NAANE+AVQAFLDGRIGF I LI Sbjct: 301 AQLTFEHPDLLRFPCLKLAYDALQAGGSAPAIMNAANEIAVQAFLDGRIGFRAIDQLIAR 360 Query: 358 VMSAIPNRQADDITALLEQDRQARDHAEALI 388 VM+A+P+ DI + EQDR+ARD A + I Sbjct: 361 VMAALPSSPVTDIDTVFEQDRRARDTAASFI 391 >ref|ZP_08275641.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30887.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Oxalobacteraceae bacterium IMCC9480] Length = 390 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 286/389 (73%), Positives = 322/389 (82%) Query: 1 MQSISILGATGSIGVSTLDVVARHPDRYRVFALSAHSRVAELAEQCQRFRPQVAVVGSAE 60 MQ+I+ILGATGSIG+STLDVVARHPDRYR++AL+AH++V ELA C RFRP VAVVGSA Sbjct: 1 MQNITILGATGSIGMSTLDVVARHPDRYRIYALTAHTKVVELAALCARFRPDVAVVGSAA 60 Query: 61 AAAQLQTLLRAAGLSTEVAYGPQALCDIASADGCDMVMAAIVGAAGLASTLAAARAGKKI 120 AA +L LL+A G++TEV+YG ALC +AS CD VMAAIVGAAGLA TLAAARAGKKI Sbjct: 61 AAQELTALLKADGIATEVSYGEDALCSVASGSACDTVMAAIVGAAGLAPTLAAARAGKKI 120 Query: 121 LLANKEALVISGQLLMDAVQAHGASLLPIDSEHNAIFQCLPAGYTRSMTAHGVEKILLTA 180 LLANKEALV+SGQL MDA+ A GA+LLPIDSEHNA+FQCLP Y R++ HG+ +ILLTA Sbjct: 121 LLANKEALVMSGQLFMDAIAASGATLLPIDSEHNAVFQCLPQPYQRNLDHHGIARILLTA 180 Query: 181 SGGPFLHRDVNTLDQVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK 240 SGGPFL R V TLDQVT +EAVAHP WVMGRKISVDSATMMNKGLEVIEAHWLFGA ++ Sbjct: 181 SGGPFLERAVETLDQVTPDEAVAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGASHER 240 Query: 241 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAALDLAQIAQL 300 IEVVIHPQSVIHSMVSY DG+VLAQLGNPDMRTPIA+ALAYPERI SGVA LDL ++A+L Sbjct: 241 IEVVIHPQSVIHSMVSYLDGTVLAQLGNPDMRTPIAHALAYPERIVSGVAPLDLTRLAKL 300 Query: 301 SFLPPDYQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLDGRIGFGKIAPLIQEVMS 360 F PD RFPCLKLAYDAL GG+ A+LNAANEVAV+AFLDGRIGF +I LI VM Sbjct: 301 EFRQPDLLRFPCLKLAYDALSTGGSAPAVLNAANEVAVEAFLDGRIGFRQIDQLIARVMH 360 Query: 361 AIPNRQADDITALLEQDRQARDHAEALIS 389 A DI LLEQDR AR A A ++ Sbjct: 361 AASFEAVPDIAGLLEQDRHARQLANAFLT 389 >ref|YP_004751992.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Collimonas fungivorans Ter331] gb|AEK61169.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Collimonas fungivorans Ter331] Length = 390 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 289/389 (74%), Positives = 319/389 (82%) Query: 1 MQSISILGATGSIGVSTLDVVARHPDRYRVFALSAHSRVAELAEQCQRFRPQVAVVGSAE 60 MQ+I+ILG+TGSIG+STLDV+ARHP+RY V+AL+AHSRV +LAEQC RF+PQ+AVVGSA Sbjct: 1 MQNITILGSTGSIGMSTLDVLARHPERYSVYALTAHSRVEQLAEQCLRFKPQLAVVGSAA 60 Query: 61 AAAQLQTLLRAAGLSTEVAYGPQALCDIASADGCDMVMAAIVGAAGLASTLAAARAGKKI 120 AA QL LL+ + EV +G ALC +ASA+ CD VMAAIVGAAGLA +LAAARAGKKI Sbjct: 61 AAQQLSALLQEQAPAIEVLFGDAALCQVASAEACDTVMAAIVGAAGLAPSLAAARAGKKI 120 Query: 121 LLANKEALVISGQLLMDAVQAHGASLLPIDSEHNAIFQCLPAGYTRSMTAHGVEKILLTA 180 LLANKEALV+SGQL +DAV+ GA LLPIDSEHNAIFQCLP GY R A GVEKILLTA Sbjct: 121 LLANKEALVMSGQLFIDAVKQSGAVLLPIDSEHNAIFQCLPQGYQRQPAALGVEKILLTA 180 Query: 181 SGGPFLHRDVNTLDQVTVEEAVAHPKWVMGRKISVDSATMMNKGLEVIEAHWLFGAPADK 240 SGGPFLHR V TL+ VT EEAVAHP WVMGRKISVDSATMMNKGLEVIEAHWLFGA A + Sbjct: 181 SGGPFLHRAVETLESVTPEEAVAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAAASQ 240 Query: 241 IEVVIHPQSVIHSMVSYADGSVLAQLGNPDMRTPIANALAYPERIASGVAALDLAQIAQL 300 IEVVIHPQSVIHSMVSY DGSVLAQLGNPDMRTPIA ALAYPERIASGV+ LDL + QL Sbjct: 241 IEVVIHPQSVIHSMVSYIDGSVLAQLGNPDMRTPIAYALAYPERIASGVSPLDLTVVGQL 300 Query: 301 SFLPPDYQRFPCLKLAYDALRAGGTLAAILNAANEVAVQAFLDGRIGFGKIAPLIQEVMS 360 F PD QRFPCLKLAYDAL+AGG+ AAILNAANEVAVQAFLDGRIGF I LI M Sbjct: 301 QFSRPDLQRFPCLKLAYDALQAGGSAAAILNAANEVAVQAFLDGRIGFRMIDQLIARTMD 360 Query: 361 AIPNRQADDITALLEQDRQARDHAEALIS 389 +P DI LLEQD AR + ++ Sbjct: 361 TLPLCAVSDIDLLLEQDLLARQTVHSFLN 389