BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1564.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775589.1| undecaprenyl pyrophosphate synthetase [Herba... 469 e-130 ref|YP_001353744.1| undecaprenyl pyrophosphate synthetase [Janth... 399 e-109 ref|YP_001099639.1| undecaprenyl pyrophosphate synthetase [Hermi... 390 e-107 ref|YP_004751990.1| Undecaprenyl pyrophosphate synthetase [Colli... 383 e-104 ref|ZP_08275643.1| Undecaprenyl pyrophosphate synthetase [Oxalob... 377 e-103 >ref|YP_003775589.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ63681.1| undecaprenyl pyrophosphate synthetase protein [Herbaspirillum seropedicae SmR1] Length = 252 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 242/252 (96%), Positives = 245/252 (97%) Query: 1 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG 60 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG Sbjct: 1 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG 60 Query: 61 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMANNGIRLRIVGDMSRFDPKLQ 120 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMA NGIRL+IVGDMSRFDPKLQ Sbjct: 61 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMAANGIRLKIVGDMSRFDPKLQ 120 Query: 121 EMAAKAEAQTAGNSRLTLTVCANYGGRWDVMQAVSKMVKDKPGATDYTEEELAPYLAMAY 180 EMAAKAEAQTA NSRLTLTVCANYGGRWDVMQAVSKM+KDKPG D+TEEELAPYLAMAY Sbjct: 121 EMAAKAEAQTAANSRLTLTVCANYGGRWDVMQAVSKMIKDKPGHADFTEEELAPYLAMAY 180 Query: 181 APEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDDKALDQAIGSYQQRERRFGR 240 APEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFD KALD AI SYQQRERRFGR Sbjct: 181 APEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDAKALDLAIASYQQRERRFGR 240 Query: 241 TSAQVLDQKKAS 252 TSAQVLDQKKAS Sbjct: 241 TSAQVLDQKKAS 252 >ref|YP_001353744.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp. Marseille] gb|ABR89698.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp. Marseille] Length = 254 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 185/248 (74%), Positives = 221/248 (89%) Query: 1 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG 60 M SSTL VPE S VPRH+AIIMDGNGRWATKRF+PRVAGH KGV+AVR IVEACA +G Sbjct: 1 MTSPSSTLVVPEVSLVPRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACARQG 60 Query: 61 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMANNGIRLRIVGDMSRFDPKLQ 120 +E++T FAFSSENWRRP DEVS+LMRLF+T LEREV KM NGIRL+IVGD+SRFD KLQ Sbjct: 61 VEYVTFFAFSSENWRRPEDEVSLLMRLFVTALEREVSKMHANGIRLKIVGDLSRFDDKLQ 120 Query: 121 EMAAKAEAQTAGNSRLTLTVCANYGGRWDVMQAVSKMVKDKPGATDYTEEELAPYLAMAY 180 +M + AE +TAGN+RLT+T+CANYGGRWD+MQAV++M+ PG+++++EE+LAPYL++AY Sbjct: 121 KMISAAERKTAGNTRLTVTICANYGGRWDIMQAVNQMLAANPGSSNFSEEQLAPYLSLAY 180 Query: 181 APEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDDKALDQAIGSYQQRERRFGR 240 APEPDLFIRTGGE+RISNFLLWQLAY+ELYFT+T+WPDFD AL+ AI SYQQRERRFGR Sbjct: 181 APEPDLFIRTGGEERISNFLLWQLAYTELYFTDTYWPDFDAAALELAIASYQQRERRFGR 240 Query: 241 TSAQVLDQ 248 TSAQ+ +Q Sbjct: 241 TSAQLAEQ 248 >ref|YP_001099639.1| undecaprenyl pyrophosphate synthetase [Herminiimonas arsenicoxydans] emb|CAL61512.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans,poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) [Herminiimonas arsenicoxydans] Length = 254 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 185/248 (74%), Positives = 214/248 (86%) Query: 1 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG 60 M SST VP+ S VPRH+AIIMDGNGRWATKRF+PRVAGH KGV+AVR IVEACA++G Sbjct: 1 MTPSSSTQIVPDVSLVPRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACAKQG 60 Query: 61 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMANNGIRLRIVGDMSRFDPKLQ 120 +E++T FAFSSENWRRP DEVS+LMRLFMT LEREV KM NGIRL+IVGD+SRFD KLQ Sbjct: 61 VEYVTFFAFSSENWRRPDDEVSLLMRLFMTALEREVSKMHANGIRLKIVGDLSRFDDKLQ 120 Query: 121 EMAAKAEAQTAGNSRLTLTVCANYGGRWDVMQAVSKMVKDKPGATDYTEEELAPYLAMAY 180 +M A AE +TA N RLT+T+CANYGGRWD+MQAV+KM P A D++EE+L P+L++AY Sbjct: 121 KMIASAERKTAANDRLTVTICANYGGRWDIMQAVNKMAAAYPDAGDFSEEQLTPFLSLAY 180 Query: 181 APEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDDKALDQAIGSYQQRERRFGR 240 APEPDLFIRTGGE+RISNFLLWQLAY+ELYFT+T+WPDFD AL+ AI SYQQRERRFGR Sbjct: 181 APEPDLFIRTGGEERISNFLLWQLAYTELYFTDTYWPDFDAAALELAISSYQQRERRFGR 240 Query: 241 TSAQVLDQ 248 TSAQV Q Sbjct: 241 TSAQVSAQ 248 >ref|YP_004751990.1| Undecaprenyl pyrophosphate synthetase [Collimonas fungivorans Ter331] gb|AEK61167.1| Undecaprenyl pyrophosphate synthetase [Collimonas fungivorans Ter331] Length = 261 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 188/253 (74%), Positives = 213/253 (84%), Gaps = 5/253 (1%) Query: 1 MKHQSSTLAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERG 60 M H SST +P VPRHVAIIMDGNGRWATKRFLPR AGH KGV+AVR++VEAC RG Sbjct: 7 MAHTSSTQTLPAIPTVPRHVAIIMDGNGRWATKRFLPRFAGHGKGVEAVRTVVEACVARG 66 Query: 61 IEFLTLFAFSSENWRRPADEVSVLMRLFMTVLEREVGKMANNGIRLRIVGDMSRFDPKLQ 120 +E+LTLFAFSSENWRRPADEVS+LMRLF+ LEREV KM NGIRL++VGD+SRFD KLQ Sbjct: 67 VEYLTLFAFSSENWRRPADEVSLLMRLFVVALEREVSKMHANGIRLKVVGDLSRFDAKLQ 126 Query: 121 EMAAKAEAQTAGNSRLTLTVCANYGGRWDVMQAVSKMVKDKPG-----ATDYTEEELAPY 175 +M AE +TAGN+ LT+TVCANYGGRWDVMQAV KM+ + A+ ++EEELA + Sbjct: 127 QMIDNAERKTAGNTTLTVTVCANYGGRWDVMQAVQKMLAARGADSAQDASVFSEEELAQH 186 Query: 176 LAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDDKALDQAIGSYQQRE 235 LAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFT+T+WPDF LDQAI SYQQRE Sbjct: 187 LAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDTYWPDFGAGELDQAIASYQQRE 246 Query: 236 RRFGRTSAQVLDQ 248 RRFGRTSAQ+L+Q Sbjct: 247 RRFGRTSAQLLEQ 259 >ref|ZP_08275643.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30889.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 237 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 174/237 (73%), Positives = 209/237 (88%) Query: 16 VPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERGIEFLTLFAFSSENWR 75 +PRH+AIIMDGNGRWATKRFLPRV GH KGVDAVR VEACA G+EFLTLFAFSSENWR Sbjct: 1 MPRHIAIIMDGNGRWATKRFLPRVTGHVKGVDAVRGTVEACARSGVEFLTLFAFSSENWR 60 Query: 76 RPADEVSVLMRLFMTVLEREVGKMANNGIRLRIVGDMSRFDPKLQEMAAKAEAQTAGNSR 135 RPADEVS+LMRLF+T L+REV KM NGIRL++VG++SRFD KL+ M + AE +TAGN+ Sbjct: 61 RPADEVSLLMRLFVTALDREVAKMHANGIRLKVVGELSRFDDKLRRMISNAERRTAGNTG 120 Query: 136 LTLTVCANYGGRWDVMQAVSKMVKDKPGATDYTEEELAPYLAMAYAPEPDLFIRTGGEQR 195 LT+T+CANYGGRWD+MQA++++V +PG D+TE++LAP+L+MAYAPEPDLFIRTGGE+R Sbjct: 121 LTVTICANYGGRWDIMQAMNQLVAQQPGRADFTEDDLAPFLSMAYAPEPDLFIRTGGEER 180 Query: 196 ISNFLLWQLAYSELYFTETFWPDFDDKALDQAIGSYQQRERRFGRTSAQVLDQKKAS 252 +SNFLLWQLAYSE+YFT+T+WPDFD + AI SYQQRERRFGRTS Q++D KKAS Sbjct: 181 VSNFLLWQLAYSEMYFTDTYWPDFDAAQIQLAITSYQQRERRFGRTSEQLVDHKKAS 237