BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1562.p         (238 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775587.1| uridylate kinase [Herbaspirillum seropedicae...   428   e-118
ref|YP_001099637.1| uridylate kinase [Herminiimonas arsenicoxyda...   412   e-113
sp|A4G4S3|PYRH_HERAR RecName: Full=Uridylate kinase; Short=UK; A...   407   e-111
ref|YP_001353746.1| uridylate kinase [Janthinobacterium sp. Mars...   406   e-111
ref|ZP_08275645.1| Uridylate kinase [Oxalobacteraceae bacterium ...   406   e-111

>ref|YP_003775587.1| uridylate kinase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63679.1| uridylate kinase protein [Herbaspirillum seropedicae SmR1]
          Length = 238

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 236/238 (99%), Positives = 238/238 (100%)

Query: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60
           MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG
Sbjct: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60

Query: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120
           VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL
Sbjct: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120

Query: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATR 180
           QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDP+ATR
Sbjct: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPSATR 180

Query: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIIKPGALKSVVMGDDEGTLVHV 238
           YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSI+KPGALKSVVMGDDEGTLVHV
Sbjct: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIVKPGALKSVVMGDDEGTLVHV 238


>ref|YP_001099637.1| uridylate kinase [Herminiimonas arsenicoxydans]
 emb|CAL61510.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
           [Herminiimonas arsenicoxydans]
          Length = 264

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 218/238 (91%), Positives = 231/238 (97%)

Query: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60
           MTTPAYKRVLLKLSGEALMGDD YGINRATIERMVADV+E+S+LGVELAIVIGGGNIFRG
Sbjct: 27  MTTPAYKRVLLKLSGEALMGDDPYGINRATIERMVADVSEVSRLGVELAIVIGGGNIFRG 86

Query: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120
           VAPGA+GMDRATADYMGMLATVMNSLALADAMRQ G+TARVMSAI IEQVVEPYVRPKAL
Sbjct: 87  VAPGAEGMDRATADYMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKAL 146

Query: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATR 180
           QYLEEGKIVVFAAGTGNPFFTTDTAAALRG+EIGA+IVLKATKVDGVY+ADP KDP ATR
Sbjct: 147 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPNKDPDATR 206

Query: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIIKPGALKSVVMGDDEGTLVHV 238
           Y +I+FDEAI+KHLQVMDATAFALCRDQKLPIKVFSI+KPGALK VVMG+DEGTLVHV
Sbjct: 207 YSTITFDEAISKHLQVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVHV 264


>sp|A4G4S3|PYRH_HERAR RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
           monophosphate kinase; Short=UMP kinase; Short=UMPK
          Length = 238

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 218/238 (91%), Positives = 231/238 (97%)

Query: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60
           MTTPAYKRVLLKLSGEALMGDD YGINRATIERMVADV+E+S+LGVELAIVIGGGNIFRG
Sbjct: 1   MTTPAYKRVLLKLSGEALMGDDPYGINRATIERMVADVSEVSRLGVELAIVIGGGNIFRG 60

Query: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120
           VAPGA+GMDRATADYMGMLATVMNSLALADAMRQ G+TARVMSAI IEQVVEPYVRPKAL
Sbjct: 61  VAPGAEGMDRATADYMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKAL 120

Query: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATR 180
           QYLEEGKIVVFAAGTGNPFFTTDTAAALRG+EIGA+IVLKATKVDGVY+ADP KDP ATR
Sbjct: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPNKDPDATR 180

Query: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIIKPGALKSVVMGDDEGTLVHV 238
           Y +I+FDEAI+KHLQVMDATAFALCRDQKLPIKVFSI+KPGALK VVMG+DEGTLVHV
Sbjct: 181 YSTITFDEAISKHLQVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVHV 238


>ref|YP_001353746.1| uridylate kinase [Janthinobacterium sp. Marseille]
 sp|A6SZP9|PYRH_JANMA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
           monophosphate kinase; Short=UMP kinase; Short=UMPK
 gb|ABR89539.1| uridylate kinase [Janthinobacterium sp. Marseille]
          Length = 238

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 219/238 (92%), Positives = 231/238 (97%)

Query: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60
           MTTPAYKRVLLKLSGEALMGDD YGINRATIERMVADV+E++KLGVELAIVIGGGNIFRG
Sbjct: 1   MTTPAYKRVLLKLSGEALMGDDPYGINRATIERMVADVSEVAKLGVELAIVIGGGNIFRG 60

Query: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120
           VAPGAQGMDRATADYMGMLATVMNSLALADAMRQ G+TARVMSAI IEQVVEPYVRPKAL
Sbjct: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKAL 120

Query: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATR 180
           QYLEEGKIV+FAAGTGNPFFTTDTAAALRGSEIGA+IVLKATKVDGVY+ADP KDP ATR
Sbjct: 121 QYLEEGKIVIFAAGTGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYSADPNKDPDATR 180

Query: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIIKPGALKSVVMGDDEGTLVHV 238
           Y +I+FDEAI+KHLQVMDATAFALCRDQKLPIKVFSI+KPGALK VVMG+DEGTLVHV
Sbjct: 181 YATITFDEAISKHLQVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVHV 238


>ref|ZP_08275645.1| Uridylate kinase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30891.1| Uridylate kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 238

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 221/238 (92%), Positives = 231/238 (97%)

Query: 1   MTTPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRG 60
           MT PAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAE++ LGVELAIVIGGGNIFRG
Sbjct: 1   MTQPAYKRVLLKLSGEALMGDDAYGINRATIERMVADVAEVAALGVELAIVIGGGNIFRG 60

Query: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKAL 120
           VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAG+TARVMSAI IEQVVEPYVRPKAL
Sbjct: 61  VAPGAQGMDRATADYMGMLATVMNSLALADAMRQAGITARVMSAISIEQVVEPYVRPKAL 120

Query: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATR 180
           QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVY+ADPKKDP ATR
Sbjct: 121 QYLEEGKIVVFAAGTGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYSADPKKDPTATR 180

Query: 181 YQSISFDEAIAKHLQVMDATAFALCRDQKLPIKVFSIIKPGALKSVVMGDDEGTLVHV 238
           Y +I+FDEAI+KHLQVMDATAFALCRDQKLPIKVFSI KPGALK V+MG+DEGTLVH+
Sbjct: 181 YTTITFDEAISKHLQVMDATAFALCRDQKLPIKVFSITKPGALKRVIMGEDEGTLVHI 238