BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1547.p (446 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775573.1| transmembrane protein [Herbaspirillum serope... 665 0.0 ref|YP_004751949.1| hypothetical protein CFU_1294 [Collimonas fu... 416 e-114 ref|YP_001099627.1| hypothetical protein HEAR1327 [Herminiimonas... 395 e-108 ref|YP_001353756.1| hypothetical protein mma_2066 [Janthinobacte... 379 e-103 ref|ZP_04578202.1| cell division protein [Oxalobacter formigenes... 313 3e-83 >ref|YP_003775573.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63665.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 441 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 376/446 (84%), Positives = 398/446 (89%), Gaps = 5/446 (1%) Query: 1 MMMDLQTSLIILGGVFVAGVITYNKWQEHKARKTVERAFSSSHDDVLMSPDEPAATAEPV 60 MMMDLQTSLIILGGVFVAGVI+YNKWQEHKARKTVERAFSSSHDDVLMSPDE A EP Sbjct: 1 MMMDLQTSLIILGGVFVAGVISYNKWQEHKARKTVERAFSSSHDDVLMSPDEDAPLVEPT 60 Query: 61 FAPPVADRTAPAPRMAEPTLEPDAGRAEPSFYDLPERKPVPAPVKAYQEQAEFEPREPFL 120 AP A P AE + + RAEPSFYD PERKPV APVKAY +QAEFEPREPFL Sbjct: 61 LAPAAAPVAEPRVEPAEAAVTGE--RAEPSFYDAPERKPVSAPVKAYLDQAEFEPREPFL 118 Query: 121 GEPPVSTAAPAGAAADEAVLGEAMAQAPQSTVAQVIAGAEEQGDTVPAFTPPPEMQARLA 180 G+ P++ G D A+ E +AQAPQSTVAQVIAGA++ +T PAF PPPEMQARLA Sbjct: 119 GDAPMAAPTQPG---DAALTDEVLAQAPQSTVAQVIAGAQDPVETAPAFAPPPEMQARLA 175 Query: 181 PKRELPVDELIDCNIPIALENPLRGDKLLPMLQGLRHVGNKPVHFIGRTTDGDWEAIAHG 240 PKRELPVDELIDCNIPIAL+NPLRGDKLLP+LQ LRHVGNKPVHFIGRT +G WEAIAHG Sbjct: 176 PKRELPVDELIDCNIPIALDNPLRGDKLLPLLQNLRHVGNKPVHFIGRTLEGQWEAIAHG 235 Query: 241 SIYNALLAGAQLANRSNAINEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQF 300 +YNALLAGAQLANRSNA+NEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQF Sbjct: 236 GVYNALLAGAQLANRSNALNEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQF 295 Query: 301 IIDHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATP 360 I DHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATP Sbjct: 296 IADHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATP 355 Query: 361 TDETTDRLTLLLDVPRVAPSRDGYGALVACAKSLSARLGGVIVDDSDQPLTDEALSDIAE 420 TDETTDRLTLLLDVPRV+P+RDGYGALVACA+SL+ RLGGVIVDDSDQPL+DEALSDIAE Sbjct: 356 TDETTDRLTLLLDVPRVSPARDGYGALVACARSLAQRLGGVIVDDSDQPLSDEALSDIAE 415 Query: 421 QVAAFYSAMESAEIPAGSTRALRLFS 446 QVAAFYSAMESAEIPAGSTRALRLFS Sbjct: 416 QVAAFYSAMESAEIPAGSTRALRLFS 441 >ref|YP_004751949.1| hypothetical protein CFU_1294 [Collimonas fungivorans Ter331] gb|AEK61126.1| hypothetical protein CFU_1294 [Collimonas fungivorans Ter331] Length = 370 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 244/445 (54%), Positives = 297/445 (66%), Gaps = 75/445 (16%) Query: 2 MMDLQTSLIILGGVFVAGVITYNKWQEHKARKTVERAFSSSHDDVLMSPDEPAATAEPVF 61 M DLQ SL I+GG F+ GVI+YNKWQE+KA+K+VERAFS SHDDVLM+P + AA + Sbjct: 1 MTDLQASLFIIGGAFLVGVISYNKWQEYKAKKSVERAFSGSHDDVLMTPGK-AAGKDSGE 59 Query: 62 APPVADRTAPAPRMAEPTLEPDAGRAEPSFYDLPERKPVPAPVKAYQEQAEFEPREPFLG 121 APP + P++ E EPDA P ++ AE + EP LG Sbjct: 60 APPRHE-----PKLFET--EPDAD---------------ALPRDDLEQSAEQQAIEPQLG 97 Query: 122 EPPVSTAAPAGAAADEAVLGEAMAQAPQSTVAQVIAGAEEQGDTVPAFTPPPEMQARLAP 181 P APA A Sbjct: 98 NP-----APAQAV----------------------------------------------- 105 Query: 182 KRELPVDELIDCNIPIALENPLRGDKLLPMLQGLRHVGNKPVHFIGRTTDGDWEAIAHGS 241 +++LPVDELIDC IP+ LE P+RGDK LP LQ LRHVGNKP+HFIG +G+WE +AHG Sbjct: 106 RKDLPVDELIDCAIPLVLEAPVRGDKALPALQSLRHVGNKPIHFIGEDANGEWEPVAHGG 165 Query: 242 IYNALLAGAQLANRSNAINEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQFI 301 IY+ LLAG QLANR+N +NEIEYSELV RLR + D L EP+LPDM +V+ TA++LHQF+ Sbjct: 166 IYSTLLAGVQLANRTNPLNEIEYSELVSRLRQIADDLGAEPDLPDMSEVMHTARSLHQFV 225 Query: 302 IDHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATPT 361 I+HDAQL VN++S GAPW+++TLLAALTRQGFD R EG +VM DGEG +LF+LSTNA+ Sbjct: 226 IEHDAQLGVNIQSNGAPWAISTLLAALTRQGFDARPEGRMVMSDGEGGLLFSLSTNASAV 285 Query: 362 DETTDRLTLLLDVPRVAPSRDGYGALVACAKSLSARLGGVIVDDSDQPLTDEALSDIAEQ 421 ETT RLTLLLDVPRVAP RDGYGA+VACA+SL+ARLGGV+VDDS+QPL D L++IA Q Sbjct: 286 AETTSRLTLLLDVPRVAPDRDGYGAMVACARSLAARLGGVLVDDSNQPLADVQLAEIAGQ 345 Query: 422 VAAFYSAMESAEIPAGSTRALRLFS 446 V AFY M++AEIPAGS RALRLFS Sbjct: 346 VDAFYREMDAAEIPAGSIRALRLFS 370 >ref|YP_001099627.1| hypothetical protein HEAR1327 [Herminiimonas arsenicoxydans] emb|CAL61500.1| Conserved hypothetical protein, putative membrane protein [Herminiimonas arsenicoxydans] Length = 368 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 233/445 (52%), Positives = 290/445 (65%), Gaps = 77/445 (17%) Query: 2 MMDLQTSLIILGGVFVAGVITYNKWQEHKARKTVERAFSSSHDDVLMSPDEPAATAEPVF 61 M DLQ SLI++GG V VI+YNKWQE+KA+K+VERAFSSSHDDVLM+ + AA A PV Sbjct: 1 MTDLQASLIVIGGAIVVAVISYNKWQEYKAKKSVERAFSSSHDDVLMASGD-AAIAVPVH 59 Query: 62 APPVADRTAPAPRMAEPTLEPDAGRAEPSFYDLPERKPVPAPVKAYQEQAEFEPREPFLG 121 A + EPTL G +E SF A+ E AE Sbjct: 60 AERL-----------EPTLSGGDG-SEESF--------------AHAESAE--------- 84 Query: 122 EPPVSTAAPAGAAADEAVLGEAMAQAPQSTVAQVIAGAEEQGDTVPAFTPPPEMQARLAP 181 PQ A+ Q D PP E Sbjct: 85 --------------------------PQD--------ADAQHDAPVDMMPPAE------- 103 Query: 182 KRELPVDELIDCNIPIALENPLRGDKLLPMLQGLRHVGNKPVHFIGRTTDGDWEAIAHGS 241 +RELPVD LIDC IP+AL LRG+K+LP LQ LRHVG+KPVHF G+ DG WEAI HG Sbjct: 104 ERELPVDYLIDCTIPLALTTQLRGEKILPALQSLRHVGSKPVHFAGQHIDGGWEAITHGG 163 Query: 242 IYNALLAGAQLANRSNAINEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQFI 301 IY +L+AG QLANRSNA+NE+EYSE VMRLR + D +P++PDM +V+ TA++LH F+ Sbjct: 164 IYKSLMAGVQLANRSNALNELEYSEFVMRLRQIADDFDADPDVPDMAEVMVTARSLHHFV 223 Query: 302 IDHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATPT 361 ++DA+LSVNV+S GAPWS+ TLLAAL RQGFD R EG LVM DG+G VLF+LSTN T Sbjct: 224 TEYDAKLSVNVQSNGAPWSVTTLLAALERQGFDVRPEGRLVMPDGDGGVLFSLSTNVTLA 283 Query: 362 DETTDRLTLLLDVPRVAPSRDGYGALVACAKSLSARLGGVIVDDSDQPLTDEALSDIAEQ 421 ++TT RLTLLLDVP VAP RDG+GA++ACA+SLS+RL G +VDDS+QPL+D +L++I Q Sbjct: 284 EDTTSRLTLLLDVPVVAPERDGFGAMIACARSLSSRLDGTLVDDSNQPLSDASLNEIGGQ 343 Query: 422 VAAFYSAMESAEIPAGSTRALRLFS 446 + FY+ ME+A+IPAGS+RALRLF+ Sbjct: 344 IEIFYADMEAADIPAGSSRALRLFN 368 >ref|YP_001353756.1| hypothetical protein mma_2066 [Janthinobacterium sp. Marseille] gb|ABR90595.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 372 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 231/445 (51%), Positives = 292/445 (65%), Gaps = 73/445 (16%) Query: 2 MMDLQTSLIILGGVFVAGVITYNKWQEHKARKTVERAFSSSHDDVLMSPDEPAATAEPVF 61 M DLQTSL ++GGV V GVI+YNKWQEHKA+K+VERAFSSSHDDVLM+P+ + E + Sbjct: 1 MNDLQTSLFVIGGVIVVGVISYNKWQEHKAKKSVERAFSSSHDDVLMAPEGRESREERL- 59 Query: 62 APPVADRTAPAPRMAEPTLEPDAGRAEPSFYDLPERKPVPAPVKAYQEQAEFEPREPFLG 121 EP++ D R EP+F + P APV+ Sbjct: 60 ---------------EPSI--DGERHEPTFSENPYDDV--APVQQ--------------- 85 Query: 122 EPPVSTAAPAGAAADEAVLGEAMAQAPQSTVAQVIAGAEEQGDTVPAFTPPPEMQARLAP 181 TAAP AE + D F P E Sbjct: 86 ----DTAAPH---------------------------AEAELDAPVDFVQPIE------- 107 Query: 182 KRELPVDELIDCNIPIALENPLRGDKLLPMLQGLRHVGNKPVHFIGRTTDGDWEAIAHGS 241 ++ELPVD LIDC IP+AL LRG+K+LP LQ LRHVG+KPVHF G+ DG WEAI HG Sbjct: 108 EKELPVDYLIDCTIPLALTTQLRGEKILPALQSLRHVGSKPVHFAGQHIDGGWEAITHGG 167 Query: 242 IYNALLAGAQLANRSNAINEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQALHQFI 301 IY +L+AG QLANRSNA+NE+EYSE VMRLR + D +P++PDM +V+ TA++LH F+ Sbjct: 168 IYKSLMAGVQLANRSNALNELEYSEFVMRLRQIADDFDADPDVPDMAEVMVTARSLHHFV 227 Query: 302 IDHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGEGEVLFALSTNATPT 361 ++DA+LSVNV + GAPWS+ TLLAAL RQGFD R EG LVM DG+G VLF+LSTN T Sbjct: 228 TEYDAKLSVNVHTNGAPWSVTTLLAALERQGFDVRPEGRLVMPDGDGGVLFSLSTNVTLA 287 Query: 362 DETTDRLTLLLDVPRVAPSRDGYGALVACAKSLSARLGGVIVDDSDQPLTDEALSDIAEQ 421 +ETT RLTLLLDVP V+P+RDG+GA+ ACA+SL+ARL G +VDD +QPL+D +L++I+ Q Sbjct: 288 EETTSRLTLLLDVPVVSPARDGFGAMTACARSLAARLDGTVVDDGNQPLSDASLNEISGQ 347 Query: 422 VAAFYSAMESAEIPAGSTRALRLFS 446 + FY+ ME+A+IPAGSTRALRLF+ Sbjct: 348 LEVFYADMEAADIPAGSTRALRLFN 372 >ref|ZP_04578202.1| cell division protein [Oxalobacter formigenes OXCC13] gb|EEO29175.1| cell division protein [Oxalobacter formigenes OXCC13] Length = 372 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 193/450 (42%), Positives = 249/450 (55%), Gaps = 83/450 (18%) Query: 2 MMDLQTSLIILGGVFVAGVITYNKWQEHKARKTVERAFSSSHDDVLMSPDEPAATAEPVF 61 M DLQ SLI +G V GVI YNKWQE++A+K VERA F Sbjct: 1 MTDLQASLIGIGVAIVVGVIAYNKWQEYRAKKHVERA----------------------F 38 Query: 62 APPVADRTAPAPRMAEPTLEPDAGRAEPSFYDLPERKPVPAPVKAYQEQAEFEPREPFLG 121 + PV D M T E A R EP A + EP LG Sbjct: 39 SDPVDDVL-----MKTGTAETGAQRQEPVLDGFA---------------ATRDKMEPSLG 78 Query: 122 EPPVSTAAPAGAAADEAVLGEAMAQAPQSTVAQVIAGAEEQGDTVPAFTPPPEMQARLAP 181 E ++ G +A+++V +A + Sbjct: 79 ES--ASQQEEGISAEKSVSDDA----------------------------------GFSE 102 Query: 182 KRELPVDELIDCNIPIALENPLRGDKLLPMLQGLRHVGNKPVHFIGRTTD----GDWEAI 237 K ELPVDELIDC I ++LE P R +KLL LQ LR+ GNKPVHF+G D W+A+ Sbjct: 103 KDELPVDELIDCEILMSLEEPARSEKLLTQLQTLRYTGNKPVHFVGLVEDEQGQTSWQAV 162 Query: 238 AHGSIYNALLAGAQLANRSNAINEIEYSELVMRLRDLTDSLSGEPELPDMPDVIRTAQAL 297 G Y L AG QLANR++A+NEIE+SEL+MRLR + D + EPE+P+M DV A+ L Sbjct: 163 VPGKTYTQLKAGVQLANRTSALNEIEFSELLMRLRQIADVIGAEPEIPEMSDVTEKAKQL 222 Query: 298 HQFIIDHDAQLSVNVRSQGAPWSLATLLAALTRQGFDRRTEGYLVMQDGE-GEVLFALST 356 QF+ DHDA+L +++RS GAPW +ATL AAL +QGF+ R +G VM+D + G+ LF LST Sbjct: 223 FQFVADHDAKLGISIRSNGAPWQVATLNAALEKQGFELRPDGLFVMKDRQNGQTLFTLST 282 Query: 357 NATPTDETTDRLTLLLDVPRVAPSRDGYGALVACAKSLSARLGGVIVDDSDQPLTDEALS 416 N P E RLTLLLDVP VAP +DG+G ++ CAK+L RL G ++DD +Q L D L Sbjct: 283 NELPASEIATRLTLLLDVPCVAPEKDGFGQMIQCAKALCVRLDGSLIDDGNQLLNDSFLE 342 Query: 417 DIAEQVAAFYSAMESAEIPAGSTRALRLFS 446 +I+ QV FYS M + IPAGSTRA+RLF+ Sbjct: 343 EISGQVKDFYSEMHACTIPAGSTRAMRLFN 372