BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1541.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775567.1| succinyl-diaminopimelate desuccinylase [Herb... 766 0.0 ref|YP_001099621.1| succinyl-diaminopimelate desuccinylase [Herm... 674 0.0 ref|YP_001353762.1| succinyl-diaminopimelate desuccinylase [Jant... 669 0.0 ref|ZP_08275851.1| N-succinyl-L,L-diaminopimelate desuccinylase ... 657 0.0 ref|YP_004751941.1| N-succinyl-L,L-diaminopimelate desuccinylase... 640 0.0 >ref|YP_003775567.1| succinyl-diaminopimelate desuccinylase [Herbaspirillum seropedicae SmR1] gb|ADJ63659.1| succinyl-diaminopimelate desuccinylase protein [Herbaspirillum seropedicae SmR1] Length = 377 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 371/377 (98%), Positives = 376/377 (99%) Query: 1 MIMSKTLALTQELMSLSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQ 60 MIMSKTLALTQELMSLSSVTPEDKGCQARLAELL PLGFVCETIQSG+VTNLWARKGTAQ Sbjct: 1 MIMSKTLALTQELMSLSSVTPEDKGCQARLAELLTPLGFVCETIQSGEVTNLWARKGTAQ 60 Query: 61 PLVVFAGHTDVVPTGPLEKWQSHPFQPTLRDGRLYGRGASDMKTSIAAMVVACEEFTAAH 120 PLVVFAGHTDVVPTGPLEKWQSHPFQPTLR+GRLYGRGASDMKTSIAAMVVACEEFTAAH Sbjct: 61 PLVVFAGHTDVVPTGPLEKWQSHPFQPTLREGRLYGRGASDMKTSIAAMVVACEEFTAAH 120 Query: 121 PEHRGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRR 180 P+H+GSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRR Sbjct: 121 PDHKGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRR 180 Query: 181 GTMSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHG 240 GTMSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHG Sbjct: 181 GTMSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHG 240 Query: 241 GTGASNVIPGEVVIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRG 300 GTGASNVIPGEV+IDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRG Sbjct: 241 GTGASNVIPGEVMIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRG 300 Query: 301 DLSDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRY 360 DLSDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRY Sbjct: 301 DLSDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRY 360 Query: 361 IDPLKNIYRKTLENLLA 377 IDPLKNIYRKTLENLLA Sbjct: 361 IDPLKNIYRKTLENLLA 377 >ref|YP_001099621.1| succinyl-diaminopimelate desuccinylase [Herminiimonas arsenicoxydans] sp|A4G4Q7|DAPE_HERAR RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase emb|CAL61494.1| Succinyl-diaminopimelate desuccinylase (SDAP) [Herminiimonas arsenicoxydans] Length = 375 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 318/374 (85%), Positives = 347/374 (92%) Query: 3 MSKTLALTQELMSLSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 62 MSKTLALT+EL++LSSVTPEDKGCQ+RL ELL+PLGFVCETI+S VTNLWARKGTAQPL Sbjct: 1 MSKTLALTEELIALSSVTPEDKGCQSRLIELLSPLGFVCETIESDGVTNLWARKGTAQPL 60 Query: 63 VVFAGHTDVVPTGPLEKWQSHPFQPTLRDGRLYGRGASDMKTSIAAMVVACEEFTAAHPE 122 +VFAGHTDVVPTGPL++W S PF PT RDG+LYGRGA+DMKTSIAAMVVA EEF AHP+ Sbjct: 61 LVFAGHTDVVPTGPLDQWTSPPFVPTQRDGKLYGRGAADMKTSIAAMVVAAEEFVHAHPD 120 Query: 123 HRGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRRGT 182 H+GSIGFLITSDEEGPA DGTV+VCNALKARGEQLDYC+VGEPTS+ LGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTVIVCNALKARGEQLDYCVVGEPTSSDVLGDTIKNGRRGS 180 Query: 183 MSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHGGT 242 MSGKLTVKGIQGHIAYPQLARNPIHQ APALAELVAE+WD GNEYYLPTSWQ+SN+HGG Sbjct: 181 MSGKLTVKGIQGHIAYPQLARNPIHQCAPALAELVAEKWDDGNEYYLPTSWQVSNMHGGA 240 Query: 243 GASNVIPGEVVIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRGDL 302 GASNVIPG VVIDFNFRF TASTVEGLQQRVHAILDKHGLEYDLKW++ G PFLTP+G L Sbjct: 241 GASNVIPGNVVIDFNFRFCTASTVEGLQQRVHAILDKHGLEYDLKWSISGYPFLTPKGSL 300 Query: 303 SDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRYID 362 SDA++ AIK ETG+ TELSTTGGTSDGRFIAQICPQV+EFGPPN SIHKIDEHIEVR+ID Sbjct: 301 SDAMADAIKSETGVTTELSTTGGTSDGRFIAQICPQVVEFGPPNGSIHKIDEHIEVRFID 360 Query: 363 PLKNIYRKTLENLL 376 PLKNIYR T+ENLL Sbjct: 361 PLKNIYRHTMENLL 374 >ref|YP_001353762.1| succinyl-diaminopimelate desuccinylase [Janthinobacterium sp. Marseille] sp|A6SZR5|DAPE_JANMA RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase gb|ABR88540.1| succinyl-diaminopimelate desuccinylase [Janthinobacterium sp. Marseille] Length = 375 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 317/374 (84%), Positives = 345/374 (92%) Query: 3 MSKTLALTQELMSLSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 62 MSKTLALT+EL++LSSVTPEDKGCQ+RL ELL PLGFVCETI+S VTNLWARKGT QPL Sbjct: 1 MSKTLALTEELIALSSVTPEDKGCQSRLIELLEPLGFVCETIESDGVTNLWARKGTTQPL 60 Query: 63 VVFAGHTDVVPTGPLEKWQSHPFQPTLRDGRLYGRGASDMKTSIAAMVVACEEFTAAHPE 122 +VFAGHTDVVPTGPLE+W S PF PT R+G+LYGRGA+DMKTSIAAMVVA EEF AHP Sbjct: 61 LVFAGHTDVVPTGPLEQWTSPPFVPTQREGKLYGRGAADMKTSIAAMVVAAEEFVQAHPA 120 Query: 123 HRGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRRGT 182 H+GSIGFLITSDEEGPA DGTV+VCNALKARGEQLDYC+VGEPTS+ LGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTVIVCNALKARGEQLDYCVVGEPTSSDVLGDTIKNGRRGS 180 Query: 183 MSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHGGT 242 MSGKLTVKGIQGHIAYPQLARNPIHQ APALAELVAE+WD GNEYYLPTSWQ+SNIHGG Sbjct: 181 MSGKLTVKGIQGHIAYPQLARNPIHQCAPALAELVAEKWDDGNEYYLPTSWQVSNIHGGA 240 Query: 243 GASNVIPGEVVIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRGDL 302 GASNVIPG VVIDFNFRF TASTV+GLQ+RVHAILDKHGLEYDLKW++ G PFLTP+G L Sbjct: 241 GASNVIPGNVVIDFNFRFCTASTVDGLQKRVHAILDKHGLEYDLKWSISGHPFLTPKGTL 300 Query: 303 SDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRYID 362 SDA+S AIK ETG+ TELSTTGGTSDGRFIAQICPQV+EFGPPN SIHKIDEHIEVR+ID Sbjct: 301 SDAMSDAIKSETGVTTELSTTGGTSDGRFIAQICPQVVEFGPPNGSIHKIDEHIEVRFID 360 Query: 363 PLKNIYRKTLENLL 376 PLKNIYR+T+ENLL Sbjct: 361 PLKNIYRRTMENLL 374 >ref|ZP_08275851.1| N-succinyl-L,L-diaminopimelate desuccinylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30682.1| N-succinyl-L,L-diaminopimelate desuccinylase [Oxalobacteraceae bacterium IMCC9480] Length = 375 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 312/374 (83%), Positives = 342/374 (91%) Query: 3 MSKTLALTQELMSLSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 62 MSKTLALT++L++LSSVTPED GCQ L LLAPLGF CE IQSG+VTNLWARKGTAQPL Sbjct: 1 MSKTLALTEKLIALSSVTPEDNGCQQHLIALLAPLGFHCEAIQSGNVTNLWARKGTAQPL 60 Query: 63 VVFAGHTDVVPTGPLEKWQSHPFQPTLRDGRLYGRGASDMKTSIAAMVVACEEFTAAHPE 122 +VFAGHTDVVPTGPL++W S PF PT RDG+LYGRG++DMKTSIAAMV+A EEFTA+HP+ Sbjct: 61 LVFAGHTDVVPTGPLDQWTSPPFVPTHRDGKLYGRGSADMKTSIAAMVIAVEEFTASHPD 120 Query: 123 HRGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRRGT 182 H+GSIGFLITSDEEGPA DGT+VVCN LK RGEQLDYCIVGEPT+ + LGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTIVVCNLLKERGEQLDYCIVGEPTATEQLGDTIKNGRRGS 180 Query: 183 MSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHGGT 242 MSG+L V+GIQGHIAYPQLARNPIHQAAPA+AELVAE+WD NEYYLPTSWQ+SNIH G Sbjct: 181 MSGRLVVRGIQGHIAYPQLARNPIHQAAPAIAELVAEKWDEANEYYLPTSWQVSNIHAGA 240 Query: 243 GASNVIPGEVVIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRGDL 302 G SNVIPGE+VIDFNFRFSTASTVEGLQQRV IL +HGLEY LKWTVGGLPFLTPRG+L Sbjct: 241 GVSNVIPGELVIDFNFRFSTASTVEGLQQRVQEILSRHGLEYSLKWTVGGLPFLTPRGEL 300 Query: 303 SDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRYID 362 SDA+S AIK ETGL+TELSTTGGTSDGRFIAQICPQVIE GPPN SIHKIDEH+EVRYID Sbjct: 301 SDAISAAIKSETGLETELSTTGGTSDGRFIAQICPQVIEVGPPNGSIHKIDEHVEVRYID 360 Query: 363 PLKNIYRKTLENLL 376 PLKNIYRKTLENLL Sbjct: 361 PLKNIYRKTLENLL 374 >ref|YP_004751941.1| N-succinyl-L,L-diaminopimelate desuccinylase [Collimonas fungivorans Ter331] gb|AEK61118.1| N-succinyl-L,L-diaminopimelate desuccinylase [Collimonas fungivorans Ter331] Length = 388 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 318/373 (85%), Positives = 344/373 (92%) Query: 4 SKTLALTQELMSLSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPLV 63 SKTLAL ++L++LSSVTP+DKGCQA L ELLAPLGF CET+QSGDVTNLWARKGT +PL+ Sbjct: 11 SKTLALAEQLIALSSVTPQDKGCQALLIELLAPLGFACETMQSGDVTNLWARKGTTRPLL 70 Query: 64 VFAGHTDVVPTGPLEKWQSHPFQPTLRDGRLYGRGASDMKTSIAAMVVACEEFTAAHPEH 123 VFAGHTDVVPTGP E+WQS PF P+ RDG+LYGRGA+DMKTSIAAMVVA EEFT A P+H Sbjct: 71 VFAGHTDVVPTGPREQWQSDPFLPSHRDGKLYGRGAADMKTSIAAMVVAVEEFTLARPDH 130 Query: 124 RGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRRGTM 183 GSI FLITSDEEGPA DGTVVVC LKARGEQLDYCIVGEPTS+ TLGDMIKNGRRGTM Sbjct: 131 AGSIAFLITSDEEGPATDGTVVVCEKLKARGEQLDYCIVGEPTSSSTLGDMIKNGRRGTM 190 Query: 184 SGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHGGTG 243 SGKLTVKGIQGHIAYPQLA+NPIH AAPALAEL AE+WD NEYYLPTSWQ+SNIHGGTG Sbjct: 191 SGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELAAEKWDKANEYYLPTSWQMSNIHGGTG 250 Query: 244 ASNVIPGEVVIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRGDLS 303 ASNVIPGEVVIDFNFRFSTAS+VEGLQQRVHAILDKHGLEY L WTVGG PFLTPRG LS Sbjct: 251 ASNVIPGEVVIDFNFRFSTASSVEGLQQRVHAILDKHGLEYTLAWTVGGRPFLTPRGTLS 310 Query: 304 DALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRYIDP 363 DA++ AIK ETG++TELSTTGGTSDGRFIAQICPQVIEFGPPN SIHKIDEH+EV++IDP Sbjct: 311 DAIAAAIKVETGINTELSTTGGTSDGRFIAQICPQVIEFGPPNASIHKIDEHVEVQFIDP 370 Query: 364 LKNIYRKTLENLL 376 LKNIYR+TLENLL Sbjct: 371 LKNIYRRTLENLL 383