BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1534.p (270 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775561.1| oxidative stress resistance two component re... 433 e-119 ref|YP_004752449.1| two-component system response regulator [Col... 422 e-116 ref|ZP_08274750.1| Two-component system response regulator OmpR ... 402 e-110 ref|YP_001353103.1| osmolarity response regulator [Janthinobacte... 400 e-110 ref|YP_001100181.1| osmolarity response regulator [Herminiimonas... 400 e-109 >ref|YP_003775561.1| oxidative stress resistance two component response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63653.1| oxidative stress resistance two component response regulator protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 238/239 (99%), Positives = 239/239 (100%) Query: 32 ANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGE 91 ANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGE Sbjct: 15 ANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGE 74 Query: 92 DGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPFNPRELVARINAVLR 151 DGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPFNPRELVARINAVLR Sbjct: 75 DGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPFNPRELVARINAVLR 134 Query: 152 RKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGETISLTTGEFSVLKVFARNARQPL 211 RKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNG+TISLTTGEFSVLKVFARNARQPL Sbjct: 135 RKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGDTISLTTGEFSVLKVFARNARQPL 194 Query: 212 SREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVWGLGYVFIPEGKPR 270 SREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVWGLGYVFIPEGKPR Sbjct: 195 SREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVWGLGYVFIPEGKPR 253 >ref|YP_004752449.1| two-component system response regulator [Collimonas fungivorans Ter331] gb|AEK61626.1| Two-component system response regulator [Collimonas fungivorans Ter331] Length = 251 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 229/252 (90%), Positives = 243/252 (96%), Gaps = 1/252 (0%) Query: 19 MNTTNGNTNTTTSANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRER 78 MNT N N T++A+Q K+LVVDDD+RLRDLLRRYLTEQGF VVTAENAQAMNKLWIRER Sbjct: 1 MNTIN-TQNQTSNAHQHKILVVDDDVRLRDLLRRYLTEQGFQVVTAENAQAMNKLWIRER 59 Query: 79 YDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPFN 138 YDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRI+GLEMGADDYLPKPFN Sbjct: 60 YDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRIVGLEMGADDYLPKPFN 119 Query: 139 PRELVARINAVLRRKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGETISLTTGEFS 198 PRELVARI AVLRRKGPDELPGAPSETP++FEFG+FILDLGTRTLKKNGE+I LTTGEFS Sbjct: 120 PRELVARIGAVLRRKGPDELPGAPSETPQSFEFGEFILDLGTRTLKKNGESIPLTTGEFS 179 Query: 199 VLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVWG 258 VLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKLIEPDPA+PLYIQTVWG Sbjct: 180 VLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKLIEPDPASPLYIQTVWG 239 Query: 259 LGYVFIPEGKPR 270 LGYVFIPEG+PR Sbjct: 240 LGYVFIPEGQPR 251 >ref|ZP_08274750.1| Two-component system response regulator OmpR [Oxalobacteraceae bacterium IMCC9480] gb|EGF31781.1| Two-component system response regulator OmpR [Oxalobacteraceae bacterium IMCC9480] Length = 253 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 217/253 (85%), Positives = 239/253 (94%), Gaps = 1/253 (0%) Query: 19 MNTT-NGNTNTTTSANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRE 77 MNTT N T T + +Q K+LVVDDDIRLRDLLRRYL EQGFNV+TAEN+Q MNKLW+RE Sbjct: 1 MNTTPNSATPATPTGHQPKILVVDDDIRLRDLLRRYLAEQGFNVITAENSQTMNKLWLRE 60 Query: 78 RYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPF 137 RYDLLVLDLMLPGEDGL+ICRRLRGAGD TPIIMLTAKGEDVDRI+GLEMGADDYLPKPF Sbjct: 61 RYDLLVLDLMLPGEDGLSICRRLRGAGDMTPIIMLTAKGEDVDRIVGLEMGADDYLPKPF 120 Query: 138 NPRELVARINAVLRRKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGETISLTTGEF 197 NPRELVARI+AVLRRK PDELPGAPSE P++FEFG+F+LDLGTRTLKK+G +++LTTGEF Sbjct: 121 NPRELVARISAVLRRKAPDELPGAPSERPQSFEFGEFVLDLGTRTLKKSGVSVALTTGEF 180 Query: 198 SVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVW 257 SVLKVFAR+ARQPLSREKLMEMARGREYEV+DRSLDVQISRLRKLIEPDP++PLYIQTVW Sbjct: 181 SVLKVFARHARQPLSREKLMEMARGREYEVYDRSLDVQISRLRKLIEPDPSSPLYIQTVW 240 Query: 258 GLGYVFIPEGKPR 270 GLGYVFIPEG+PR Sbjct: 241 GLGYVFIPEGQPR 253 >ref|YP_001353103.1| osmolarity response regulator [Janthinobacterium sp. Marseille] gb|ABR89667.1| oxidative stress resistance two-components response regulator [Janthinobacterium sp. Marseille] Length = 248 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 215/246 (87%), Positives = 237/246 (96%) Query: 25 NTNTTTSANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVL 84 +T +T+++Q KVLVVDDD+RLRDLLRRYL+EQGFNVVTAENAQAMNKLW+RERYDLLVL Sbjct: 3 DTAHSTNSHQTKVLVVDDDLRLRDLLRRYLSEQGFNVVTAENAQAMNKLWLRERYDLLVL 62 Query: 85 DLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPKPFNPRELVA 144 DLMLPGEDGL+ICRRLRGAGD+TPIIMLTAKGEDVDRI+GLEMGADDYL KPFNPRELVA Sbjct: 63 DLMLPGEDGLSICRRLRGAGDKTPIIMLTAKGEDVDRIVGLEMGADDYLAKPFNPRELVA 122 Query: 145 RINAVLRRKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGETISLTTGEFSVLKVFA 204 RI+AVLRR GP+E+PGAPSETP++F FG+F+LDLGTRTLKKN ET+ LTTGEFSVLKVFA Sbjct: 123 RISAVLRRVGPEEIPGAPSETPQSFTFGEFVLDLGTRTLKKNDETVPLTTGEFSVLKVFA 182 Query: 205 RNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQTVWGLGYVFI 264 R+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKLIEPDP+ PLYIQTVWGLGYVFI Sbjct: 183 RHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKLIEPDPSTPLYIQTVWGLGYVFI 242 Query: 265 PEGKPR 270 PEGKPR Sbjct: 243 PEGKPR 248 >ref|YP_001100181.1| osmolarity response regulator [Herminiimonas arsenicoxydans] emb|CAL62057.1| Transcriptional regulatory protein OmpR [Herminiimonas arsenicoxydans] Length = 255 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 219/255 (85%), Positives = 239/255 (93%), Gaps = 3/255 (1%) Query: 19 MNTTN---GNTNTTTSANQFKVLVVDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWI 75 MNTTN T +T+++Q KVLVVDDD+RLRDLLRRYL+EQGFNVVTAE+AQAMNKLW+ Sbjct: 1 MNTTNVPMKETGHSTNSHQTKVLVVDDDLRLRDLLRRYLSEQGFNVVTAESAQAMNKLWL 60 Query: 76 RERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAKGEDVDRIIGLEMGADDYLPK 135 RERYDLLVLDLMLPGEDGL+ICRRLRGAGD+TPIIMLTAKGEDVDRI+GLEMGADDY+ K Sbjct: 61 RERYDLLVLDLMLPGEDGLSICRRLRGAGDKTPIIMLTAKGEDVDRIVGLEMGADDYIAK 120 Query: 136 PFNPRELVARINAVLRRKGPDELPGAPSETPETFEFGDFILDLGTRTLKKNGETISLTTG 195 PFNPRELVARI+AVLRR GPDE PGAPSETP++F FG+F LDLGTRTLKKN ET+ LTTG Sbjct: 121 PFNPRELVARISAVLRRIGPDEAPGAPSETPQSFTFGEFTLDLGTRTLKKNDETVPLTTG 180 Query: 196 EFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKLIEPDPANPLYIQT 255 EFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKLIEPDP+ PLYIQT Sbjct: 181 EFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKLIEPDPSTPLYIQT 240 Query: 256 VWGLGYVFIPEGKPR 270 VWGLGYVFIPEGKPR Sbjct: 241 VWGLGYVFIPEGKPR 255