BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1520.p         (95 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_841089.1| plasmid maintenance system killer protein [Rals...   124   3e-27
ref|YP_003847239.1| plasmid maintenance system killer [Gallionel...   124   4e-27
ref|YP_004681763.1| excinuclease ABC ATP-binding subunit A [Cupr...   124   4e-27
ref|YP_004488466.1| plasmid maintenance system killer [Delftia s...   124   5e-27
ref|ZP_04760847.1| plasmid maintenance system killer [Acidovorax...   122   2e-26

>ref|YP_841089.1| plasmid maintenance system killer protein [Ralstonia eutropha H16]
 emb|CAJ96359.1| plasmid maintenance system killer protein [Ralstonia eutropha H16]
          Length = 115

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 3/95 (3%)

Query: 1   MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNR 60
           MI SFRC+DT  LF G+ VPRF NIRA AERKL++L  A+TLEFLR+PPGNRL+ L G+R
Sbjct: 24  MIQSFRCSDTAELFAGRCVPRFGNIRAVAERKLRLLQRASTLEFLRSPPGNRLQLLTGDR 83

Query: 61  DGQHSIRINSQFRLCFMWHSIGRIGASHVEIIDYH 95
            G++SIRIN Q+R+CF+W      G + VEIIDYH
Sbjct: 84  KGRYSIRINEQWRICFIW---THDGPAVVEIIDYH 115


>ref|YP_003847239.1| plasmid maintenance system killer [Gallionella capsiferriformans
          ES-2]
 gb|ADL55475.1| plasmid maintenance system killer [Gallionella capsiferriformans
          ES-2]
          Length = 92

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 3/95 (3%)

Query: 1  MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNR 60
          MI  F+C +TEALFHGK + RFANI + A RKLQ ++AA  L+FLR PPGNRLESL G+R
Sbjct: 1  MITDFKCKETEALFHGKRIARFANISSVAMRKLQQVNAAVALDFLRVPPGNRLESLSGDR 60

Query: 61 DGQHSIRINSQFRLCFMWHSIGRIGASHVEIIDYH 95
           GQHSIRIN Q+R+CF+W S   +    VEI+DYH
Sbjct: 61 VGQHSIRINEQWRICFIWQSGHAVA---VEIVDYH 92


>ref|YP_004681763.1| excinuclease ABC ATP-binding subunit A [Cupriavidus necator N-1]
 gb|AEI80531.1| plasmid maintenance system killer protein HigB [Cupriavidus necator
           N-1]
          Length = 115

 Score =  124 bits (311), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 3/95 (3%)

Query: 1   MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNR 60
           MI SFRC+DT  LF G+ VPRF NIRA AERKL++L +A+TLEF R+PPGNRL+ L G+R
Sbjct: 24  MIQSFRCSDTAELFAGRCVPRFGNIRAVAERKLRLLQSASTLEFPRSPPGNRLQLLAGDR 83

Query: 61  DGQHSIRINSQFRLCFMWHSIGRIGASHVEIIDYH 95
            G++SIRIN Q+R+CF+W      G + VEIIDYH
Sbjct: 84  KGRYSIRINEQWRICFIW---THDGPAAVEIIDYH 115


>ref|YP_004488466.1| plasmid maintenance system killer [Delftia sp. Cs1-4]
 gb|AEF90111.1| plasmid maintenance system killer [Delftia sp. Cs1-4]
          Length = 92

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 3/95 (3%)

Query: 1  MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNR 60
          MIL FRCADT+AL  GK V RFAN+ AAA RKL  L+AA +LEFLR PPGNRLE+L G+R
Sbjct: 1  MILDFRCADTQALMLGKRVARFANLEAAAMRKLVQLNAATSLEFLRIPPGNRLEALQGSR 60

Query: 61 DGQHSIRINSQFRLCFMWHSIGRIGASHVEIIDYH 95
           GQ+SIRIN Q+RLCF+W       AS VEI+DYH
Sbjct: 61 RGQYSIRINEQWRLCFVW---ADGHASQVEIVDYH 92


>ref|ZP_04760847.1| plasmid maintenance system killer [Acidovorax delafieldii 2AN]
 gb|EER62394.1| plasmid maintenance system killer [Acidovorax delafieldii 2AN]
          Length = 93

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/94 (62%), Positives = 70/94 (74%), Gaps = 3/94 (3%)

Query: 2  ILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRD 61
          ILSF+C DT+ LF      RFANI++ AERKL  LDAA TL+FLR+PPGNRLE L G+R 
Sbjct: 3  ILSFKCQDTQRLFTSGKTRRFANIQSVAERKLAQLDAAQTLDFLRSPPGNRLELLIGDRQ 62

Query: 62 GQHSIRINSQFRLCFMWHSIGRIGASHVEIIDYH 95
          GQHSIRIN Q+R+CF+W      G S VEI+DYH
Sbjct: 63 GQHSIRINDQWRVCFVW---TEKGVSDVEIVDYH 93