BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1519.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_841090.1| plasmid maintenance system antidote protein [Ra...   142   2e-32
ref|YP_004681764.1| plasmid maintenance system killer protein Hi...   139   2e-31
ref|YP_004415307.1| virulence-associated protein, putative [Pusi...   132   2e-29
ref|YP_002512134.1| XRE family transcriptional regulator [Thioal...   127   4e-28
ref|YP_385912.1| XRE family plasmid maintenance system antidote ...   127   8e-28

>ref|YP_841090.1| plasmid maintenance system antidote protein [Ralstonia eutropha
          H16]
 emb|CAJ96360.1| plasmid maintenance system antidote protein [Ralstonia eutropha
          H16]
          Length = 111

 Score =  142 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 70/91 (76%), Positives = 80/91 (87%)

Query: 8  MRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARFFGG 67
          MRPIHPGEILRE+FL P+N+SANALA+AL V A RI +IV E+RGI+PDTALRLAR+FGG
Sbjct: 8  MRPIHPGEILREDFLVPLNMSANALALALRVTAARINDIVREQRGITPDTALRLARYFGG 67

Query: 68 DAQSWLNLQMTYDLKIAQRDHGARIEQEVRP 98
          DAQSWLNLQ+ YDLK+AQRDHG RI  EV P
Sbjct: 68 DAQSWLNLQLDYDLKVAQRDHGERIMAEVAP 98


>ref|YP_004681764.1| plasmid maintenance system killer protein HigB [Cupriavidus
          necator N-1]
 gb|AEI80532.1| plasmid maintenance system antidote protein VapI [Cupriavidus
          necator N-1]
          Length = 111

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/91 (75%), Positives = 79/91 (86%)

Query: 8  MRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARFFGG 67
          MRPIHPGEILRE+FL P+N+SANALA+AL V A RI +IV E+RGI+PDTALRLAR+FGG
Sbjct: 8  MRPIHPGEILREDFLVPLNMSANALALALRVTAARINDIVREQRGITPDTALRLARYFGG 67

Query: 68 DAQSWLNLQMTYDLKIAQRDHGARIEQEVRP 98
          DAQSWLNLQ+ Y LK+AQRDHG RI  EV P
Sbjct: 68 DAQSWLNLQLDYGLKVAQRDHGERIMAEVAP 98


>ref|YP_004415307.1| virulence-associated protein, putative [Pusillimonas sp. T7-7]
 gb|AEC18683.1| virulence-associated protein, putative [Pusillimonas sp. T7-7]
          Length = 100

 Score =  132 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/95 (69%), Positives = 76/95 (80%)

Query: 6   NRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARFF 65
           N MRPIHPGEILREE+LAP+ +S NAL+  LHVPATR+ EIV ERRGI+PDTALRLA +F
Sbjct: 4   NGMRPIHPGEILREEYLAPLGMSVNALSTMLHVPATRMNEIVRERRGITPDTALRLAAYF 63

Query: 66  GGDAQSWLNLQMTYDLKIAQRDHGARIEQEVRPLE 100
           GGDA SWLNLQ  YDLKI +      I +E+RPLE
Sbjct: 64  GGDAASWLNLQQAYDLKITEAKVAKLIAEEIRPLE 98


>ref|YP_002512134.1| XRE family transcriptional regulator [Thioalkalivibrio
          sulfidophilus HL-EbGr7]
 gb|ACL71147.1| putative plasmid maintenance system antidote protein, XRE family
          [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 99

 Score =  127 bits (320), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 67/94 (71%), Positives = 81/94 (86%)

Query: 5  SNRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLARF 64
          ++RMRPIHPGEILREE+LAP+ +S NALA AL VPATR+ EIVNERR +S DTALRLARF
Sbjct: 3  THRMRPIHPGEILREEYLAPLGMSVNALARALRVPATRLHEIVNERRAVSADTALRLARF 62

Query: 65 FGGDAQSWLNLQMTYDLKIAQRDHGARIEQEVRP 98
          FGGDAQSWLNLQ TY+L++A+ + G  I++EV P
Sbjct: 63 FGGDAQSWLNLQSTYELRLAEAERGDIIKKEVAP 96


>ref|YP_385912.1| XRE family plasmid maintenance system antidote protein [Geobacter
          metallireducens GS-15]
 gb|ABB33187.1| plasmid maintenance system antidote protein, XRE family
          [Geobacter metallireducens GS-15]
          Length = 101

 Score =  127 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/94 (67%), Positives = 80/94 (85%)

Query: 3  SPSNRMRPIHPGEILREEFLAPINLSANALAIALHVPATRIGEIVNERRGISPDTALRLA 62
          +P+NRMRPIHPGE+LREEFL P+ +SA+ALA+ L VPA RI +IV ERR ++PDTALRLA
Sbjct: 2  NPTNRMRPIHPGEVLREEFLIPLGMSAHALALELKVPAPRINDIVRERRAVTPDTALRLA 61

Query: 63 RFFGGDAQSWLNLQMTYDLKIAQRDHGARIEQEV 96
          R+FG   Q WLNLQ +YDLKIA+R+ G++IE+EV
Sbjct: 62 RYFGTTPQFWLNLQTSYDLKIAERELGSKIEREV 95