BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1516.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775544.1| signal transduction containing EAL and modif... 670 0.0 ref|XP_002536757.1| conserved hypothetical protein [Ricinus comm... 227 3e-57 ref|XP_002535770.1| conserved hypothetical protein [Ricinus comm... 186 7e-45 ref|YP_286500.1| EAL [Dechloromonas aromatica RCB] >gi|71848534|... 157 4e-36 gb|EGW61549.1| putative signal transduction protein [Dechlorosom... 155 1e-35 >ref|YP_003775544.1| signal transduction containing EAL and modified HD-GYP domains protein [Herbaspirillum seropedicae SmR1] gb|ADJ63636.1| signal transduction containing EAL and modified HD-GYP domains protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 360/399 (90%), Positives = 377/399 (94%) Query: 1 MAVQDKSVPFPLVFLQPVADVHHVWTALSLHISPAVEDGSALLSRLFNEFDLLDALGGLN 60 MA+QDKS+PFPLVFLQPVADVHHVWTALSLHISPAVEDGSALL+RLFNEF+L DALGGLN Sbjct: 1 MALQDKSLPFPLVFLQPVADVHHVWTALSLHISPAVEDGSALLARLFNEFELHDALGGLN 60 Query: 61 CIIPVRDPAIFAPEFAQEIPQGQLALRVPVEHCVDPGKIDALDWLYSRGFAIIADGLPAQ 120 CIIPV DPA FAPEF ++ PQGQLALRVPVEHCVDP +IDALDWLYSRGF+I+ADGLPAQ Sbjct: 61 CIIPVSDPASFAPEFREQFPQGQLALRVPVEHCVDPARIDALDWLYSRGFSILADGLPAQ 120 Query: 121 GASVFPFVESMALDAGVGHLPETGHWLHRLRGPHLAENVGDAVQFDACRVEGFRWFSGDY 180 GASVFPFVES+ LDA +G LPET WLH LRGPHLAENV DAVQFDACRV+GFRWFSGDY Sbjct: 121 GASVFPFVESIVLDASIGKLPETAQWLHGLRGPHLAENVADAVQFDACRVQGFRWFSGDY 180 Query: 181 ALHPDSRLSQKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLFKLVSSAAFGF 240 ALHPDSRLSQKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLFKLVSSAAFGF Sbjct: 181 ALHPDSRLSQKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLFKLVSSAAFGF 240 Query: 241 SAHITNFTQAINLLGRRQLQRWLQLLLYARFPGDESANPLLPRAAARAAMMEAMCHQIDG 300 SAHITNFTQAINLLGRRQLQRWLQLLLYARFPGDESANPLLPRAAARAAMMEAM ID Sbjct: 241 SAHITNFTQAINLLGRRQLQRWLQLLLYARFPGDESANPLLPRAAARAAMMEAMAQCIDC 300 Query: 301 DRDEQDRAFIVGMFSLLDVLLGMPLNDIIEPLKLPVDIVNALVYRTGRLGKLLNVVERSE 360 ++E DRAFI GMFSLLD+LLGMPLNDIIEPLKLPVDIVNALV R+GRLGKLL+VVERSE Sbjct: 301 TQEELDRAFITGMFSLLDILLGMPLNDIIEPLKLPVDIVNALVRRSGRLGKLLDVVERSE 360 Query: 361 DGRIPLRHVDLDAAGLDAEVYCRCLIQAFNWATRVSTEA 399 DGRIPLRH DLDAAGLDAEVYCRCLIQAFNWATRVSTEA Sbjct: 361 DGRIPLRHSDLDAAGLDAEVYCRCLIQAFNWATRVSTEA 399 >ref|XP_002536757.1| conserved hypothetical protein [Ricinus communis] gb|EEF25625.1| conserved hypothetical protein [Ricinus communis] Length = 356 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 157/346 (45%), Positives = 202/346 (58%), Gaps = 9/346 (2%) Query: 51 DLLDALGGLNCIIPVRDPAIFAPEFAQEIPQGQLALRVPVEHCVDPGKIDALDWLYSRGF 110 D+ AL L+CI+PV P + + + + LRVP C D L L G+ Sbjct: 17 DVFAALAPLDCILPVPHPHLLEQSQLETLQANSIILRVPAAACADVAVQKKLSALADAGY 76 Query: 111 AIIADGLPAQGASVFPFVESMALDAGVGHLPETGHWLHRLRGPHLAENVGDAVQFDACRV 170 I+ DG+ A+ + DA + P L GPHLA +G + C Sbjct: 77 RIMLDGVAEGSAATMCGARGLIFDASLTLPPVLA--LVAQPGPHLALGMGSEARIAECAK 134 Query: 171 EGFRWFSGDYALHPDSRLSQKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLF 230 GF WF+GD+ALHP + + SR RLL LL L+ARDAD+ ELE LLKQDPAL+Y L Sbjct: 135 AGFSWFAGDFALHPHHDSNLGDGTSRKRLLALLGLLARDADSRELEVLLKQDPALAYHLL 194 Query: 231 KLVSSAAFGFSAHITNFTQAINLLGRRQLQRWLQLLLYARFPGDESANPLLPRAAARAAM 290 KLV+SAAF S+ I +F QAIN+LGRRQLQRWLQLLLYAR D ANPLLP AA RA+M Sbjct: 195 KLVNSAAFALSSPIHSFGQAINVLGRRQLQRWLQLLLYARQQDDGLANPLLPLAAVRASM 254 Query: 291 MEAMCHQIDGDRDEQDRAFIVGMFSLLDVLLGMPLNDIIEPLKLPVDIVNALVYRTGRLG 350 ME + + DRD QD AF+ G+FSLLDVLL MP+ +I+ L L +D+V AL+ R G LG Sbjct: 255 MEELAKSLGWDRDHQDMAFVAGVFSLLDVLLAMPMTEIVAALSLDLDVVRALLDRAGPLG 314 Query: 351 KLLNVVERSEDGRIPLRHVDLDAAGLDAEVYCRCLIQAFNWATRVS 396 LL +VE L+ AG+ + Y +QA++WA +VS Sbjct: 315 DLLKLVEHHNAA-------SLEQAGISHQTYWEAQLQAYHWAIQVS 353 >ref|XP_002535770.1| conserved hypothetical protein [Ricinus communis] gb|EEF26611.1| conserved hypothetical protein [Ricinus communis] Length = 345 Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 110/279 (39%), Positives = 166/279 (59%), Gaps = 6/279 (2%) Query: 122 ASVFPFVESMALDAGVGHLPETGHWLHRLRGPHLAENVGDAVQFDACRVEGFRWFSGDYA 181 AS+ P S+ ++A ++ ++ + + G V Q + ++ G WFSG Y Sbjct: 69 ASLPPERTSVVVNADSANMSQSHTFSSVVVGQDFIPGVTSHRQMEDAKLAGSIWFSGPYI 128 Query: 182 LHPDSRLSQKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLFKLVSSAAFGFS 241 HP +K+S SRA LLKLL L+A DAD+ E+E + K++P LS+ LF+LV+S + G Sbjct: 129 AHPPVVEGKKDS-SRATLLKLLTLIADDADSAEIEMVFKREPELSFNLFRLVNSVSMGLK 187 Query: 242 AHITNFTQAINLLGRRQLQRWLQLLLYARFP-GDESANPLLPRAAARAAMMEAMCHQIDG 300 + IT F QAI +LGRRQ+QRW+QL+LY R G ++ NPLL +AA R +ME + Sbjct: 188 SKITTFNQAIMVLGRRQMQRWIQLMLYTRHQHGSDAPNPLLQQAAMRGRLMERFAGSLGW 247 Query: 301 DRDEQDRAFIVGMFSLLDVLLGMPLNDIIEPLKLPVDIVNALVYRTGRLGKLLNVVERSE 360 D +Q++AF+ G+FSLLD LLGM +N+I+ +KLP D+ +AL+ + G L ++L +VER + Sbjct: 248 DAGKQEQAFMAGIFSLLDTLLGMTMNEILVIIKLPDDVQSALLGQGGDLSEMLMLVERLQ 307 Query: 361 DGRIPLRHVDLDA-AGLDAEVYCRCLIQAFNWATRVSTE 398 G R + A L E + C A WA+ + E Sbjct: 308 AGD---RSSSMPAFLSLSPEQFADCQFDALKWASGMGQE 343 >ref|YP_286500.1| EAL [Dechloromonas aromatica RCB] gb|AAZ48030.1| EAL protein [Dechloromonas aromatica RCB] Length = 417 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 121/375 (32%), Positives = 186/375 (49%), Gaps = 9/375 (2%) Query: 32 ISPAVEDGSALLSRLFNEFDLLDALGGLNCIIPVRDPAIFAPEFAQEIPQGQLALRVPVE 91 ++ V+ + +++ F E + ALG I V + +F+ + + +P+ + L + Sbjct: 40 VTDGVQATATVIANAFTELGIEAALGQHRGFINVDEQFLFS-DMLELLPRHAVVLEILET 98 Query: 92 HCVDPGKIDALDWLYSRGFAIIADG---LPAQGASVFPFVESMALDAGVGHLPETGHWLH 148 I+ L + GF + D L Q A + VE + +D + + Sbjct: 99 VPPSDAVIERCKALKAAGFTLALDDVIQLEPQFAELLALVEIVKVDIQPLSRVQLMQLVM 158 Query: 149 RLR---GPHLAENVGDAVQFDACRVEGFRWFSGDYALHPDSRLSQKNSISRARLLKLLEL 205 +L+ LAE V Q + C GF F G Y P +K S+ L+KL+ L Sbjct: 159 KLKPMGKQLLAEKVDSREQMEQCLKLGFTLFQGYYFAKPTIIAGKKLDHSQLSLMKLMGL 218 Query: 206 VARDADANELESLLKQDPALSYQLFKLVSSAAFGFSAHITNFTQAINLLGRRQLQRWLQL 265 + DAD +ELE+ LK +P L+ L ++ +S G + IT+ AI +LGRRQLQRWLQL Sbjct: 219 LLGDADTSELEAALKPEPGLTVNLLRMTNSVGAGGTERITSLGHAITVLGRRQLQRWLQL 278 Query: 266 LLYARFPGDESANPLLPRAAARAAMMEAMCHQID-GDRDEQDRAFIVGMFSLLDVLLGMP 324 L++A + NPLL AA R +ME + ++ GD DRAF+VG+ SL+ VL+G P Sbjct: 279 LVFASGGQSPTENPLLQMAATRGRLMELLAGELSPGDNALADRAFMVGIMSLMPVLVGQP 338 Query: 325 LNDIIEPLKLPVDIVNALVYRTGRLGKLLNVVERSEDGRIP-LRHVDLDAAGLDAEVYCR 383 + DI+ PL L D+ +AL +G LG LL + E SE+G + L + GL + R Sbjct: 339 IADIVAPLGLATDVRDALCAGSGPLGALLRIAESSENGNLAELATALTELPGLGPKAINR 398 Query: 384 CLIQAFNWATRVSTE 398 QA WA + E Sbjct: 399 AQTQALQWANEIGQE 413 >gb|EGW61549.1| putative signal transduction protein [Dechlorosoma suillum PS] Length = 399 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 127/391 (32%), Positives = 194/391 (49%), Gaps = 13/391 (3%) Query: 15 LQPVADVHHVWTALSLHISPAVEDGSALLSRLFNEFDLLDALGGLNCIIPVRDPAIFAPE 74 L+P+ DV+ W+AL L G A S+LF L ++P+ + Sbjct: 9 LRPLLDVNQAWSALELGPRGI---GLAASSQLFAHGQNQPQPSPLPWLVPLSGTDLNHSG 65 Query: 75 FAQEIPQGQLALRVPVEHCVDPGKIDALDWLYSRGFAIIAD--GLPAQGASVFPFVESMA 132 +++P Q++L +P E +D L +G+ + AD PA + + Sbjct: 66 LTRQLPPQQVSLLLPAEVWLDAAGAARCQELAKQGYRLGADVDSAPALEQCAEAGAQLLR 125 Query: 133 LDAGVGHLPETGHWLHRLRGPHL---AENVGDAVQFDACRVEGFRWFSGDYALHPDSRLS 189 LDA + L+RL+ L A+ V F C GF SG++ P+ + Sbjct: 126 LDAATAREQVSPVLLNRLKEKGLTLVADGVSSHDLFVWCGARGFTLMSGEFVPQPEECPT 185 Query: 190 QKNSISRARLLKLLELVARDADANELESLLKQDPALSYQLFKLVSSAAFGFSAHITNFTQ 249 ++ RLLKLL L+ +DAD E+E ++KQ+P LSY L +LV+S + G + IT+F Q Sbjct: 186 SPADPTKLRLLKLLSLIVQDADTREIEEMIKQEPKLSYNLLRLVNSVSVGATTKITSFAQ 245 Query: 250 AINLLGRRQLQRWLQLLLYA-RFPGDESANPLLPRAAARAAMME----AMCHQIDGDRDE 304 AI LLGRRQLQRWLQLL+YA +F NPL+P+AA R ++E A + D D Sbjct: 246 AITLLGRRQLQRWLQLLIYANQFNAGSQPNPLMPQAALRGRLVELIALAAHPEAAEDTDF 305 Query: 305 QDRAFIVGMFSLLDVLLGMPLNDIIEPLKLPVDIVNALVYRTGRLGKLLNVVERSEDGRI 364 D A++ G FSLLDVLL +P++ ++ L L ++ A+ G LG L++VE E G Sbjct: 306 HDCAYMAGAFSLLDVLLHLPMDSVLAALPLADEVAEAVGRHQGPLGDALSLVESLERGLP 365 Query: 365 PLRHVDLDAAGLDAEVYCRCLIQAFNWATRV 395 L+ L + + + A W + + Sbjct: 366 APDTALLEKLRLRGDALGQLQVDALAWVSHI 396