BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1514.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775543.1| anaerobic coproporphyrinogen III oxidase oxi... 736 0.0 ref|YP_001100384.1| coproporphyrinogen III oxidase [Herminiimona... 669 0.0 ref|YP_001353024.1| coproporphyrinogen III oxidase [Janthinobact... 662 0.0 ref|YP_004752479.1| coproporphyrinogen III oxidase-like protein,... 648 0.0 ref|ZP_08272972.1| Radical SAM family enzyme, coproporphyrinogen... 625 e-177 >ref|YP_003775543.1| anaerobic coproporphyrinogen III oxidase oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ63635.1| anaerobic coproporphyrinogen III oxidase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 414 Score = 736 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 361/413 (87%), Positives = 381/413 (92%) Query: 1 MIPIKPIPADIPAGQAASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN 60 MI IKP+P AGQ ASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN Sbjct: 1 MISIKPVPVTAVAGQGASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN 60 Query: 61 SHEVKGSFPEEAYLDALRSDLEQSLPLIWGRKIHTIFIGGGTPSLLSAAGLDRLLSDLRT 120 SHEVK FPE+ YLDALR DLEQ+LPLIWGRKI++IFIGGGTPSLLSAAGLDRLLSDLRT Sbjct: 61 SHEVKDGFPEQEYLDALRLDLEQALPLIWGRKIYSIFIGGGTPSLLSAAGLDRLLSDLRT 120 Query: 121 LLPFDGDIEITMEANPGTFEADKFRSYRDSGISRLSIGIQSFNGQHLHALGRIHDGDQAR 180 LLP D DIEITMEANPGTFEADKFRSYRDSGI+RLSIGIQSFN HL ALGRIHDG QA Sbjct: 121 LLPLDADIEITMEANPGTFEADKFRSYRDSGINRLSIGIQSFNSAHLQALGRIHDGGQAH 180 Query: 181 KAVEIAQANFDNFNLDLMYALPQQTLAEAKSDIETAIAFAPPHLSLYHLTLEPNTLFAKY 240 +AVEIA ANFDNFNLDLMYALPQQTL +A++DI+TAI FAPPHLSLYHLTLEPNTLFAK+ Sbjct: 181 QAVEIAHANFDNFNLDLMYALPQQTLEQARTDIQTAIDFAPPHLSLYHLTLEPNTLFAKF 240 Query: 241 PPPVPDDDASADMQDMIAELTTAAGYVNYEVSAYAQPKRRARHNLNYWQFGDYLGIGAGA 300 PP VPD+D SADMQDMI ELTT AGY NYEVSAYAQP RRARHNLNYWQFGDYLGIGAGA Sbjct: 241 PPAVPDEDTSADMQDMIGELTTQAGYGNYEVSAYAQPGRRARHNLNYWQFGDYLGIGAGA 300 Query: 301 HSKLSFPHRIVRQMRYKHPQSYLEHAKAGTPVQEEAEIGRDALGFEFMLNALRLTEGFSP 360 HSKLSFPHRIVRQMRYKHPQ+YL+H KAGT +QEEAEIGRDALGFEFMLNALRLTEGF P Sbjct: 301 HSKLSFPHRIVRQMRYKHPQAYLQHIKAGTHIQEEAEIGRDALGFEFMLNALRLTEGFPP 360 Query: 361 NLFAERTGMSLNQIEKSLNLAEQKGMLYRDHALIRPTDLGRRFLNDLQEIFLS 413 NLFAERTG++LNQI K L+LAE+KGMLYRDHALIRPT LGRRFLNDLQEIFLS Sbjct: 361 NLFAERTGLALNQIGKQLDLAERKGMLYRDHALIRPTPLGRRFLNDLQEIFLS 413 >ref|YP_001100384.1| coproporphyrinogen III oxidase [Herminiimonas arsenicoxydans] emb|CAL62261.1| Putative oxygen-independent coproporphyrinogen III oxidase [Herminiimonas arsenicoxydans] Length = 414 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 318/414 (76%), Positives = 363/414 (87%) Query: 1 MIPIKPIPADIPAGQAASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN 60 MIPIKPI D S PA+AA A+L+PG+L LTALPPLSLYVHFPWCV+KCPYCDFN Sbjct: 1 MIPIKPIGNDAAFNLDHSQPARAATAYLQPGALNLTALPPLSLYVHFPWCVKKCPYCDFN 60 Query: 61 SHEVKGSFPEEAYLDALRSDLEQSLPLIWGRKIHTIFIGGGTPSLLSAAGLDRLLSDLRT 120 SHE G FPE+ YL ALR+DLEQ+LPLIWGRKI+TIFIGGGTPSLLSA GLDRLLSD+RT Sbjct: 61 SHEATGGFPEDEYLSALRADLEQALPLIWGRKIYTIFIGGGTPSLLSAKGLDRLLSDIRT 120 Query: 121 LLPFDGDIEITMEANPGTFEADKFRSYRDSGISRLSIGIQSFNGQHLHALGRIHDGDQAR 180 LLP DG +EITMEANPGTFEA+KF+SYR SG++RLSIGIQSFN +HL ALGRIHDGD+AR Sbjct: 121 LLPLDGAVEITMEANPGTFEAEKFKSYRSSGVNRLSIGIQSFNARHLQALGRIHDGDEAR 180 Query: 181 KAVEIAQANFDNFNLDLMYALPQQTLAEAKSDIETAIAFAPPHLSLYHLTLEPNTLFAKY 240 +AV+IA ANF+NFNLDLMYALP QTL EA+ D++TAIAFAPPHLSLYHLT+EPNT+FAKY Sbjct: 181 RAVDIAMANFENFNLDLMYALPSQTLEEARQDVQTAIAFAPPHLSLYHLTMEPNTVFAKY 240 Query: 241 PPPVPDDDASADMQDMIAELTTAAGYVNYEVSAYAQPKRRARHNLNYWQFGDYLGIGAGA 300 PP VPDDDASADMQDMIAE TTAAGY +YEVSAYAQPKR+ARHNLNYWQFGDYLGIGAGA Sbjct: 241 PPVVPDDDASADMQDMIAEETTAAGYQHYEVSAYAQPKRQARHNLNYWQFGDYLGIGAGA 300 Query: 301 HSKLSFPHRIVRQMRYKHPQSYLEHAKAGTPVQEEAEIGRDALGFEFMLNALRLTEGFSP 360 H+KLSFPHR++RQ RYK P+SY+E + G P+QEE EI R LGFEFMLNA+RLT G Sbjct: 301 HTKLSFPHRVIRQARYKQPKSYMEQMRLGNPIQEETEISRSELGFEFMLNAMRLTNGVEV 360 Query: 361 NLFAERTGMSLNQIEKSLNLAEQKGMLYRDHALIRPTDLGRRFLNDLQEIFLSE 414 NLFA+RTGM LN IE++L AE KG+LYRDH I+PT+LG+RFLNDLQ++FL+E Sbjct: 361 NLFADRTGMPLNAIERALRAAEDKGLLYRDHKTIKPTELGQRFLNDLQQMFLAE 414 >ref|YP_001353024.1| coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] gb|ABR88674.1| oxygen-independent coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] Length = 414 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 314/414 (75%), Positives = 361/414 (87%) Query: 1 MIPIKPIPADIPAGQAASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN 60 MIPIKPI I SGPA+ A A+LKPG+L LTALPPLSLYVHFPWCV+KCPYCDFN Sbjct: 1 MIPIKPISNSIADALDHSGPARVATAYLKPGALSLTALPPLSLYVHFPWCVKKCPYCDFN 60 Query: 61 SHEVKGSFPEEAYLDALRSDLEQSLPLIWGRKIHTIFIGGGTPSLLSAAGLDRLLSDLRT 120 SHE G FPE+ YL ALR+DLE +LPLIWGRKI+TIFIGGGTPSLLSAAGLDRLLSD+RT Sbjct: 61 SHEATGGFPEDEYLSALRADLEMALPLIWGRKIYTIFIGGGTPSLLSAAGLDRLLSDIRT 120 Query: 121 LLPFDGDIEITMEANPGTFEADKFRSYRDSGISRLSIGIQSFNGQHLHALGRIHDGDQAR 180 LLP DG +EITMEANPGTFEA+KF+SYR SGI+RLSIGIQSFN +HL ALGRIH+GD+A+ Sbjct: 121 LLPLDGAVEITMEANPGTFEAEKFKSYRASGINRLSIGIQSFNSRHLDALGRIHNGDEAQ 180 Query: 181 KAVEIAQANFDNFNLDLMYALPQQTLAEAKSDIETAIAFAPPHLSLYHLTLEPNTLFAKY 240 +AV+IA +NFDNFNLDLMYALP QTL EA+ D++TAIA+APPHLSLYHLT+EPNT+FAKY Sbjct: 181 RAVDIAASNFDNFNLDLMYALPSQTLDEARLDVQTAIAYAPPHLSLYHLTMEPNTVFAKY 240 Query: 241 PPPVPDDDASADMQDMIAELTTAAGYVNYEVSAYAQPKRRARHNLNYWQFGDYLGIGAGA 300 PP VPDDDASADMQDMI + T AAGY +YEVSAYAQPKR+ARHNLNYWQFGDYLGIGAGA Sbjct: 241 PPVVPDDDASADMQDMIEQETGAAGYQHYEVSAYAQPKRQARHNLNYWQFGDYLGIGAGA 300 Query: 301 HSKLSFPHRIVRQMRYKHPQSYLEHAKAGTPVQEEAEIGRDALGFEFMLNALRLTEGFSP 360 H+KLSFPHR++RQ RYK P+SY+E + G P+QEE EI R LGFEFMLNA+RL EG Sbjct: 301 HTKLSFPHRVIRQARYKQPKSYMEQMRLGNPIQEEKEITRSELGFEFMLNAMRLVEGVEV 360 Query: 361 NLFAERTGMSLNQIEKSLNLAEQKGMLYRDHALIRPTDLGRRFLNDLQEIFLSE 414 N+FAERTGM LN +E++LN AE KG+LYRDH I+PT LG+RFLNDLQE+FL++ Sbjct: 361 NMFAERTGMPLNAVERALNEAEAKGLLYRDHKTIKPTVLGQRFLNDLQEMFLAD 414 >ref|YP_004752479.1| coproporphyrinogen III oxidase-like protein, oxygen-independent [Collimonas fungivorans Ter331] gb|AEK61656.1| coproporphyrinogen III oxidase-like protein, oxygen-independent [Collimonas fungivorans Ter331] Length = 418 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 320/416 (76%), Positives = 358/416 (86%), Gaps = 4/416 (0%) Query: 1 MIPIKPIPADIPA-GQAASGPAQAALAFLK---PGSLQLTALPPLSLYVHFPWCVRKCPY 56 MIPIKPI A QAA P+ AA A L PG+L L+ALPPLSLY+HFPWCV+KCPY Sbjct: 1 MIPIKPIGMPGQAKSQAADKPSAAAQAALAYLQPGALSLSALPPLSLYIHFPWCVKKCPY 60 Query: 57 CDFNSHEVKGSFPEEAYLDALRSDLEQSLPLIWGRKIHTIFIGGGTPSLLSAAGLDRLLS 116 CDFNSHE KG FPEE YL ALR DLE SLPLIWGRKI+TIFIGGGTPSL+SAAGLDRL+S Sbjct: 61 CDFNSHEAKGGFPEEEYLAALRLDLEASLPLIWGRKIYTIFIGGGTPSLMSAAGLDRLMS 120 Query: 117 DLRTLLPFDGDIEITMEANPGTFEADKFRSYRDSGISRLSIGIQSFNGQHLHALGRIHDG 176 D+R+LLP DG EITMEANPGTFE +KF+SYR+SGI+RLSIGIQSFNG+HL ALGRIHD Sbjct: 121 DVRSLLPLDGAAEITMEANPGTFEVEKFKSYRNSGINRLSIGIQSFNGRHLQALGRIHDD 180 Query: 177 DQARKAVEIAQANFDNFNLDLMYALPQQTLAEAKSDIETAIAFAPPHLSLYHLTLEPNTL 236 +AR+AVEIA A FDNFNLDLMYALP QTL EA+ D+ TAI FAPPHLSLYHLTLEPNT Sbjct: 181 GEARRAVEIAHATFDNFNLDLMYALPSQTLEEAQQDVATAIGFAPPHLSLYHLTLEPNTY 240 Query: 237 FAKYPPPVPDDDASADMQDMIAELTTAAGYVNYEVSAYAQPKRRARHNLNYWQFGDYLGI 296 FAKYPP VPDDDASA+MQDMI+ T+AAGY +YEVSAYAQ R+ARHNLNYWQFGDYLGI Sbjct: 241 FAKYPPVVPDDDASAEMQDMISAHTSAAGYGHYEVSAYAQAGRQARHNLNYWQFGDYLGI 300 Query: 297 GAGAHSKLSFPHRIVRQMRYKHPQSYLEHAKAGTPVQEEAEIGRDALGFEFMLNALRLTE 356 GAGAHSKLSFPHR++RQMRYK P++YLEH++ G VQEE EIGRD LGFEFMLNALRL Sbjct: 301 GAGAHSKLSFPHRVIRQMRYKQPKAYLEHSRLGNVVQEETEIGRDDLGFEFMLNALRLNN 360 Query: 357 GFSPNLFAERTGMSLNQIEKSLNLAEQKGMLYRDHALIRPTDLGRRFLNDLQEIFL 412 GF NLF+ERTG++LN IEKSLN AE KG+LYRDH +IRPT+LGRRFLNDLQ++FL Sbjct: 361 GFEVNLFSERTGLALNTIEKSLNQAEAKGLLYRDHKIIRPTELGRRFLNDLQQVFL 416 >ref|ZP_08272972.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33594.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 418 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 301/418 (72%), Positives = 349/418 (83%), Gaps = 4/418 (0%) Query: 1 MIPIKPIPADIPAGQAASGPAQAALAFLKPGSLQLTALPPLSLYVHFPWCVRKCPYCDFN 60 MIPI PI A + A A +L+PG L L+ALPPL+LY+HFPWCV+KCPYCDFN Sbjct: 1 MIPIIPIQPARSAAVPVADAATVANTYLRPGILNLSALPPLALYIHFPWCVKKCPYCDFN 60 Query: 61 SHEVKGS----FPEEAYLDALRSDLEQSLPLIWGRKIHTIFIGGGTPSLLSAAGLDRLLS 116 SHEV G FPEEAYLDA+R+DLE +LPLIWGRKI+TIFIGGGTPSL+SAAGLDRL+S Sbjct: 61 SHEVAGQSQSGFPEEAYLDAVRADLESALPLIWGRKIYTIFIGGGTPSLMSAAGLDRLMS 120 Query: 117 DLRTLLPFDGDIEITMEANPGTFEADKFRSYRDSGISRLSIGIQSFNGQHLHALGRIHDG 176 D+RTLLP DG EITMEANPGTFE +KFRSYR SGI+RLSIGIQSFNG+HL ALGRIHD Sbjct: 121 DVRTLLPLDGAAEITMEANPGTFEVEKFRSYRASGINRLSIGIQSFNGEHLRALGRIHDH 180 Query: 177 DQARKAVEIAQANFDNFNLDLMYALPQQTLAEAKSDIETAIAFAPPHLSLYHLTLEPNTL 236 D+AR+AV+IA + FDNFNLDLMYALP QTLAEA DI TA+ +APPHLSLYHLT+EPNT+ Sbjct: 181 DEARRAVDIAHSTFDNFNLDLMYALPSQTLAEATQDIRTALGYAPPHLSLYHLTMEPNTV 240 Query: 237 FAKYPPPVPDDDASADMQDMIAELTTAAGYVNYEVSAYAQPKRRARHNLNYWQFGDYLGI 296 FAK+PP +PDDD SADMQDMIA T AAGY +YEVSAYAQP R++RHNLNYWQFGDYLG+ Sbjct: 241 FAKFPPALPDDDLSADMQDMIAAETGAAGYGHYEVSAYAQPGRQSRHNLNYWQFGDYLGV 300 Query: 297 GAGAHSKLSFPHRIVRQMRYKHPQSYLEHAKAGTPVQEEAEIGRDALGFEFMLNALRLTE 356 GAGAHSKLSFPHRI+RQ R+K P+SY+E+ G+ +QEE EI R LGFEFMLN LRLT Sbjct: 301 GAGAHSKLSFPHRIIRQARFKQPKSYMENMARGSAIQEENEIARGELGFEFMLNTLRLTS 360 Query: 357 GFSPNLFAERTGMSLNQIEKSLNLAEQKGMLYRDHALIRPTDLGRRFLNDLQEIFLSE 414 GF NLFAERTG+ LN +E +L AE KG+L+RDH IRPT LG+RFLNDLQ++FL++ Sbjct: 361 GFQVNLFAERTGLGLNAVESALQAAEAKGLLFRDHKTIRPTLLGQRFLNDLQQMFLAD 418