BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1509.p         (212 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775538.1| guanylate kinase [Herbaspirillum seropedicae...   409   e-112
ref|YP_004752964.1| Guanylate kinase [Collimonas fungivorans Ter...   343   7e-93
ref|YP_001353018.1| guanylate kinase [Janthinobacterium sp. Mars...   334   5e-90
ref|ZP_08272966.1| Guanylate kinase [Oxalobacteraceae bacterium ...   333   8e-90
ref|YP_001100390.1| guanylate kinase [Herminiimonas arsenicoxyda...   325   2e-87

>ref|YP_003775538.1| guanylate kinase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63630.1| guanylate kinase (GMP kinase) protein [Herbaspirillum seropedicae
           SmR1]
          Length = 212

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 209/212 (98%), Positives = 210/212 (99%)

Query: 1   MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISYTTRAPRPGEEHGREYYFT 60
           MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSIS+TTRAPRPGEEHGREYYFT
Sbjct: 1   MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISFTTRAPRPGEEHGREYYFT 60

Query: 61  DVEDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFTN 120
           D EDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQF N
Sbjct: 61  DPEDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFPN 120

Query: 121 AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS 180
           AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS
Sbjct: 121 AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS 180

Query: 181 ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS 212
           ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS
Sbjct: 181 ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS 212


>ref|YP_004752964.1| Guanylate kinase [Collimonas fungivorans Ter331]
 gb|AEK62141.1| Guanylate kinase [Collimonas fungivorans Ter331]
          Length = 214

 Score =  343 bits (881), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 176/212 (83%), Positives = 189/212 (89%)

Query: 1   MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISYTTRAPRPGEEHGREYYFT 60
           MP + P SGSLFMVVAPSGAGKSTLVNALL QE AIKLSISYTTR PRPGE+ GREY+FT
Sbjct: 1   MPDEHPMSGSLFMVVAPSGAGKSTLVNALLAQEQAIKLSISYTTRPPRPGEQDGREYHFT 60

Query: 61  DVEDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFTN 120
            VEDF  R  +GEFLEWAEVH NYYGTSRL IA+Q+ +GTDVLLEIDWQGAQQVKKQF +
Sbjct: 61  TVEDFRARHKQGEFLEWAEVHTNYYGTSRLAIAEQMQSGTDVLLEIDWQGAQQVKKQFPH 120

Query: 121 AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS 180
           A+GIFILPPSIAALE+RLKKRGQDEP VITRRILAAGGEIAH+PEFEYVIINQEFA ALS
Sbjct: 121 AVGIFILPPSIAALEDRLKKRGQDEPQVITRRILAAGGEIAHAPEFEYVIINQEFASALS 180

Query: 181 ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS 212
           ELTAIV+A RCRF QQA RNA LF QLGIHA+
Sbjct: 181 ELTAIVKATRCRFSQQAVRNASLFAQLGIHAN 212


>ref|YP_001353018.1| guanylate kinase [Janthinobacterium sp. Marseille]
 gb|ABR88283.1| guanylate kinase [Janthinobacterium sp. Marseille]
          Length = 214

 Score =  334 bits (856), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 170/212 (80%), Positives = 189/212 (89%)

Query: 1   MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISYTTRAPRPGEEHGREYYFT 60
           M  Q  +SGSLF+VVAPSGAGKS+LVNALL+QEP+IKLSISYTTR PRPGE+HGREY+FT
Sbjct: 1   MSEQAHSSGSLFLVVAPSGAGKSSLVNALLQQEPSIKLSISYTTRPPRPGEQHGREYFFT 60

Query: 61  DVEDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFTN 120
            V+DFL R+   EFLE AEV GNYYGTSR+ IADQ+A GTDVLLEIDWQGAQQVKKQF +
Sbjct: 61  SVDDFLARRQSNEFLESAEVFGNYYGTSRIQIADQMAAGTDVLLEIDWQGAQQVKKQFPH 120

Query: 121 AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS 180
           A+GIFILPPSIAALEERLKKRGQDE HVITRRILAAGGEIAH+ EFEYVIINQEF VAL+
Sbjct: 121 AVGIFILPPSIAALEERLKKRGQDEDHVITRRILAAGGEIAHASEFEYVIINQEFTVALA 180

Query: 181 ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS 212
           EL+AIV+A RCRF QQ+ RNA LF QLGIHA+
Sbjct: 181 ELSAIVKATRCRFAQQSTRNASLFAQLGIHAN 212


>ref|ZP_08272966.1| Guanylate kinase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33588.1| Guanylate kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 214

 Score =  333 bits (855), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 167/206 (81%), Positives = 181/206 (87%)

Query: 7   TSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISYTTRAPRPGEEHGREYYFTDVEDFL 66
           ++GSLFMVVAPSGAGKSTLVNALL QEP +KLSISYTTR PRPGE+HGREYYFT   DFL
Sbjct: 7   SAGSLFMVVAPSGAGKSTLVNALLAQEPVLKLSISYTTRPPRPGEQHGREYYFTTAADFL 66

Query: 67  KRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFTNAIGIFI 126
            R+  GEFLE AEVHGNYYGTSR+MIADQI +GTDVLLEIDWQGAQQVKKQF   + IFI
Sbjct: 67  ARRDAGEFLESAEVHGNYYGTSRVMIADQIKSGTDVLLEIDWQGAQQVKKQFPYGVRIFI 126

Query: 127 LPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALSELTAIV 186
           LPPSI ALEERL KRGQDEPH+ITRR+LAAGGE+AH+ EFEYVIINQ+FA ALSEL AIV
Sbjct: 127 LPPSIDALEERLNKRGQDEPHIITRRLLAAGGEMAHAGEFEYVIINQDFARALSELAAIV 186

Query: 187 QAARCRFPQQAARNAYLFTQLGIHAS 212
           QA RCRF QQAARN  LF QLGIHA+
Sbjct: 187 QATRCRFSQQAARNTSLFAQLGIHAA 212


>ref|YP_001100390.1| guanylate kinase [Herminiimonas arsenicoxydans]
 emb|CAL62267.1| guanylate kinase (GMP kinase) [Herminiimonas arsenicoxydans]
          Length = 214

 Score =  325 bits (834), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 165/212 (77%), Positives = 187/212 (88%)

Query: 1   MPVQKPTSGSLFMVVAPSGAGKSTLVNALLKQEPAIKLSISYTTRAPRPGEEHGREYYFT 60
           M  Q  +SGSLF+VVAPSGAGKS+LVNALL+QEP+IKLSISYTTR PRP ++HGREY+FT
Sbjct: 1   MSEQATSSGSLFLVVAPSGAGKSSLVNALLEQEPSIKLSISYTTRPPRPNDQHGREYFFT 60

Query: 61  DVEDFLKRQAEGEFLEWAEVHGNYYGTSRLMIADQIANGTDVLLEIDWQGAQQVKKQFTN 120
            VEDF+ R+  GEFLE AEV GNYYGTSR+ IA+Q+A G DVLLEIDWQGAQQVKKQF +
Sbjct: 61  TVEDFIARRNAGEFLESAEVFGNYYGTSRVQIAEQMATGVDVLLEIDWQGAQQVKKQFPH 120

Query: 121 AIGIFILPPSIAALEERLKKRGQDEPHVITRRILAAGGEIAHSPEFEYVIINQEFAVALS 180
           A+GIFILPPSIAALEERLKKRGQD+  VITRRILAAGGEIAH+ EFEYVIINQEF VAL+
Sbjct: 121 AVGIFILPPSIAALEERLKKRGQDDHDVITRRILAAGGEIAHASEFEYVIINQEFTVALA 180

Query: 181 ELTAIVQAARCRFPQQAARNAYLFTQLGIHAS 212
           EL+AIV+A RCRF QQ+ RNA LF QLGIHA+
Sbjct: 181 ELSAIVKATRCRFAQQSTRNASLFAQLGIHAN 212