BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1498.p (453 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775529.1| signal transduction containing EAL and modif... 772 0.0 ref|YP_001353014.1| signal transduction protein [Janthinobacteri... 456 e-126 ref|YP_001100394.1| EAL domain-containing protein [Herminiimonas... 439 e-121 ref|YP_412027.1| diguanylate phosphodiesterase [Nitrosospira mul... 396 e-108 ref|XP_002539661.1| conserved hypothetical protein [Ricinus comm... 288 2e-75 >ref|YP_003775529.1| signal transduction containing EAL and modified HD-GYP domains protein [Herbaspirillum seropedicae SmR1] gb|ADJ63621.1| signal transduction containing EAL and modified HD-GYP domains protein [Herbaspirillum seropedicae SmR1] Length = 448 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 400/430 (93%), Positives = 414/430 (96%) Query: 16 HQALDFFLARQPILSREQDLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVI 75 HQALDF+LARQPILSREQ LIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVI Sbjct: 13 HQALDFYLARQPILSREQHLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVI 72 Query: 76 GNLHGFINVDAAVLMSDFIYFLPADKVVLEILETVRVTPELVTRVRELVAAGYVFALDDV 135 GNL GFINVDAAVLMSDFIYFLP DKVVLEILETVRVTPELV RVRELV AGYVFALDDV Sbjct: 73 GNLQGFINVDAAVLMSDFIYFLPNDKVVLEILETVRVTPELVVRVRELVKAGYVFALDDV 132 Query: 136 VAESQEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVESLQVFNDCMTF 195 VAESQEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVE+LQ FNDC+TF Sbjct: 133 VAESQEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVETLQQFNDCVTF 192 Query: 196 GFDYFQGYYFAKPMILQGKKLEASKMIIMHLLTLLVRNVDNAEIVRYIKRDVALSLTLLR 255 GFDYFQGYYFAKPMILQGKKLEASKM+IMHLLTLLVRNVDN EIVR+IKRDVALSLTLLR Sbjct: 193 GFDYFQGYYFAKPMILQGKKLEASKMVIMHLLTLLVRNVDNGEIVRFIKRDVALSLTLLR 252 Query: 256 LVNTPVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDKDRAHSMSPLMILAATRGK 315 LVNTPVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDK++AH+MSPLMILAATRGK Sbjct: 253 LVNTPVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDKEQAHTMSPLMILAATRGK 312 Query: 316 MLELITAKIRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGF 375 MLELIT +IRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGF Sbjct: 313 MLELITTRIRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGF 372 Query: 376 YGTVLRLVECTELREPDQAEMQRLLEELQLSSDDFFAAEKQAFEWGNSIANNNIGQQASM 435 YG LRLVECTE R+ DQAEMQRLL+ELQLS+DDFF AEK AFEWGNSI+NNNIG QASM Sbjct: 373 YGVALRLVECTEQRDQDQAEMQRLLDELQLSADDFFEAEKHAFEWGNSISNNNIGAQASM 432 Query: 436 QMSPPPEGYI 445 MSPPPEG+I Sbjct: 433 HMSPPPEGFI 442 >ref|YP_001353014.1| signal transduction protein [Janthinobacterium sp. Marseille] gb|ABR89716.1| signal transduction protein [Janthinobacterium sp. Marseille] Length = 425 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 242/406 (59%), Positives = 306/406 (75%), Gaps = 1/406 (0%) Query: 20 DFFLARQPILSREQDLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVIGNLH 79 +FFLARQPIL+ +QDL+ YELLFR A+ GPANV DD+ ATA+VIAHASELG+ NVIGN Sbjct: 18 EFFLARQPILNNDQDLVAYELLFRRASSGPANVVDDLAATASVIAHASELGIGNVIGNSL 77 Query: 80 GFINVDAAVLMSDFIYFLPADKVVLEILETVRVTPELVTRVRELVAAGYVFALDDVVAES 139 GF NVDAAVLM DF+ FLP+DKVVLEILETV +T ELV RV ELVA G+ FALDDV++ S Sbjct: 78 GFFNVDAAVLMCDFVNFLPSDKVVLEILETVEITHELVERVSELVAQGFTFALDDVISHS 137 Query: 140 QEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVESLQVFNDCMTFGFDY 199 +++LLPL+KIIKID+ + ++L KL+ HF+ K LLAEKVE+ + F CM GF Y Sbjct: 138 DALKDLLPLIKIIKIDITGMSTTELGKLADHFRLEDKLLLAEKVETQEQFEACMKLGFHY 197 Query: 200 FQGYYFAKPMILQGKKLEASKMIIMHLLTLLVRNVDNAEIVRYIKRDVALSLTLLRLVNT 259 FQGYYFA+P+IL GKKL S++ IM L+ L++ + D AEI R IK+D +L LTLLRL NT Sbjct: 198 FQGYYFARPVILSGKKLAPSQLAIMQLMALIMADADTAEIERNIKKDASLVLTLLRLANT 257 Query: 260 PVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDKDRAHSMSPLMILAATRGKMLEL 319 P G + IDSLGQAL VLGRRQL+RWLQI+L+A +K +H SPL+ LA TRGK+LEL Sbjct: 258 PGVGVTQRIDSLGQALTVLGRRQLQRWLQIILYAEHNKG-SHFTSPLLQLATTRGKLLEL 316 Query: 320 ITAKIRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGFYGTV 379 IT K+RP R M++ AFTVGIMSL+D LF SME +L Q++V E+ +ALL R GFYG + Sbjct: 317 ITEKLRPDNRSMADTAFTVGIMSLMDTLFSQSMEEILDQVSVVEEVTDALLYRKGFYGDL 376 Query: 380 LRLVECTELREPDQAEMQRLLEELQLSSDDFFAAEKQAFEWGNSIA 425 L+L E E E A + L++LQLS +D +A + AFEW N+++ Sbjct: 377 LKLAEYIEQIEKTGALLIPTLQKLQLSIEDLYALQLAAFEWSNNVS 422 >ref|YP_001100394.1| EAL domain-containing protein [Herminiimonas arsenicoxydans] emb|CAL62271.1| Conserved hypothetical protein; putative EAL domain [Herminiimonas arsenicoxydans] Length = 425 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 236/406 (58%), Positives = 302/406 (74%), Gaps = 1/406 (0%) Query: 20 DFFLARQPILSREQDLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVIGNLH 79 +FFLARQPIL+ EQ+L+ YELLFR A GPANV DD+ ATA+VIAHASELG+ NVIG Sbjct: 19 EFFLARQPILNSEQNLVAYELLFRRALSGPANVVDDLAATASVIAHASELGIVNVIGASL 78 Query: 80 GFINVDAAVLMSDFIYFLPADKVVLEILETVRVTPELVTRVRELVAAGYVFALDDVVAES 139 GF NVDAAVLM DF+ FLP +KVVLEILETV VTPELV RV EL A G+ FALDDV++ + Sbjct: 79 GFFNVDAAVLMRDFVNFLPCEKVVLEILETVEVTPELVARVAELSAQGFTFALDDVISHT 138 Query: 140 QEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVESLQVFNDCMTFGFDY 199 + +++LLPLVKIIKID+ + +++ KL +F+R K LLAEKVE+++ F DCM GF Y Sbjct: 139 EALQKLLPLVKIIKIDITGMTKAEIAKLVDYFRRDDKLLLAEKVETIEQFQDCMDLGFHY 198 Query: 200 FQGYYFAKPMILQGKKLEASKMIIMHLLTLLVRNVDNAEIVRYIKRDVALSLTLLRLVNT 259 FQGYYFA+P+IL GKKL S++ +M L+ L++ + D A+I IK+D +L LTLLRL NT Sbjct: 199 FQGYYFARPVILSGKKLAPSQLAVMQLMALIMADADTADIEAIIKKDASLVLTLLRLTNT 258 Query: 260 PVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDKDRAHSMSPLMILAATRGKMLEL 319 P G + IDSL QAL VLGRRQL+RWLQI+L+A K + SPL+ LA TRGK+LEL Sbjct: 259 PGLGVTRRIDSLSQALTVLGRRQLQRWLQIILYAEHHKGSQFN-SPLLQLATTRGKLLEL 317 Query: 320 ITAKIRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGFYGTV 379 IT K+RPG+R M++ AFTVGIMSL+D LFG SM+ +L Q+ V ++ ALL R GFYG + Sbjct: 318 ITEKLRPGQRAMADTAFTVGIMSLMDTLFGQSMQQILEQVAVVDDVSSALLARRGFYGDL 377 Query: 380 LRLVECTELREPDQAEMQRLLEELQLSSDDFFAAEKQAFEWGNSIA 425 L+L E E E A + L++LQLS +D +A + AFEW N ++ Sbjct: 378 LKLAEYIEQIEKTGALLVPTLQKLQLSIEDLYALQLAAFEWSNIVS 423 >ref|YP_412027.1| diguanylate phosphodiesterase [Nitrosospira multiformis ATCC 25196] gb|ABB74635.1| diguanylate phosphodiesterase (EAL domain) [Nitrosospira multiformis ATCC 25196] Length = 424 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 217/410 (52%), Positives = 287/410 (70%), Gaps = 5/410 (1%) Query: 17 QALDFFLARQPILSREQDLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVIG 76 Q +FFLARQPIL + Q+LI YELLFR A +D A++IAH SELG+ NV G Sbjct: 14 QVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASIIAHTSELGIENVTG 73 Query: 77 NLHGFINVDAAVLMSDFIYFLPADKVVLEILETVRVTPELVTRVRELVAAGYVFALDDVV 136 + GF NV++ +LM D + FLPA+KVV E +T ++TPELV RV EL AGY FALDDV+ Sbjct: 74 SALGFFNVNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAELAKAGYRFALDDVI 133 Query: 137 AESQEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVESLQVFNDCMTFG 196 S+ I+ LLP V+IIKID + + L L FK+A+K LLA+KVE+L+ F +C G Sbjct: 134 TLSEYIKPLLPFVEIIKIDTSVMTYADLAMLVRQFKQARKVLLADKVETLEQFQNCHELG 193 Query: 197 FDYFQGYYFAKPMILQGKKLEASKMIIMHLLTLLVRNVDNAEIVRYIKRDVALSLTLLRL 256 FDY+QGYYFAKP +L GKKL S++ IM L+TL+ R+ D EI + IK++V+L L+LLRL Sbjct: 194 FDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRIKKEVSLCLSLLRL 253 Query: 257 VNTPVYGFQKFIDSLGQALIVLGRRQLKRWLQILLFANTDKDRAHSMSPLMILAATRGKM 316 VNTP G K I SL +AL+VLGRRQL+RWLQI ++ D + SPL++LAATRGK+ Sbjct: 254 VNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDP-QIQFGSPLLLLAATRGKL 312 Query: 317 LELITAKIRPGRRKMSEMAFTVGIMSLVDALFGMSMETVLRQITVSTEIREALLRRTGFY 376 LEL+ K++P R M+++AFTVGI+SL+DALFG ME +LRQI +S EI EALL RTGFY Sbjct: 313 LELVAQKLQPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEEITEALLYRTGFY 372 Query: 377 GTVLRLVECTELREPDQAE--MQRLLEELQLSSDDFFAAEKQAFEWGNSI 424 G +L+L E L +P +A + LL L L ++ + + +AFEW NS+ Sbjct: 373 GDLLKLAE--YLEKPGEAGRLLVPLLARLGLPIEELYPFQLEAFEWSNSL 420 >ref|XP_002539661.1| conserved hypothetical protein [Ricinus communis] gb|EEF22722.1| conserved hypothetical protein [Ricinus communis] Length = 272 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 145/255 (56%), Positives = 193/255 (75%) Query: 20 DFFLARQPILSREQDLIGYELLFRSAAFGPANVKDDVTATAAVIAHASELGLSNVIGNLH 79 +F+L RQPIL R Q L GYELLFR+A GPA+V +D++ATAAVIAHAS+LG+ IG+ Sbjct: 18 EFYLGRQPILDRNQALFGYELLFRNAPVGPAHVTNDLSATAAVIAHASQLGMEKTIGDAL 77 Query: 80 GFINVDAAVLMSDFIYFLPADKVVLEILETVRVTPELVTRVRELVAAGYVFALDDVVAES 139 GF+NVDA+VLMSD FLP DKVVLEIL TV++T ++V+R+REL G+ FALDDV ES Sbjct: 78 GFVNVDASVLMSDIFSFLPRDKVVLEILNTVQITADVVSRIRELAGHGFRFALDDVTGES 137 Query: 140 QEIEELLPLVKIIKIDVMEVDPSKLLKLSVHFKRAQKELLAEKVESLQVFNDCMTFGFDY 199 E+ LLPLV +K+D+ + L KL+ F++ +K+L+AEKVE+ + F +C+ GFDY Sbjct: 138 AEVAALLPLVDYVKMDMRNIALDTLSKLAPRFRQEKKKLVAEKVETREEFKNCLDLGFDY 197 Query: 200 FQGYYFAKPMILQGKKLEASKMIIMHLLTLLVRNVDNAEIVRYIKRDVALSLTLLRLVNT 259 FQGYYFA+P+I+ GKKL S++ +M L+TL+ + DN +I R IKRDV+L+L LLRLVNT Sbjct: 198 FQGYYFARPVIMSGKKLSPSQLAVMELMTLVTSDADNHDIERAIKRDVSLALNLLRLVNT 257 Query: 260 PVYGFQKFIDSLGQA 274 P G ++ IDSL QA Sbjct: 258 PAVGARQRIDSLSQA 272