BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1496.p (578 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775527.1| chloride channel protein [Herbaspirillum ser... 954 0.0 ref|YP_004752221.1| putative chloride channel family protein [Co... 703 0.0 ref|ZP_06842894.1| Cl- channel voltage-gated family protein [Bur... 675 0.0 ref|YP_559043.1| putative voltage-gated ClC-type chloride channe... 672 0.0 ref|ZP_02355528.1| putative voltage-gated ClC-type chloride chan... 657 0.0 >ref|YP_003775527.1| chloride channel protein [Herbaspirillum seropedicae SmR1] gb|ADJ63619.1| chloride channel protein [Herbaspirillum seropedicae SmR1] Length = 555 Score = 954 bits (2466), Expect = 0.0, Method: Composition-based stats. Identities = 523/555 (94%), Positives = 541/555 (97%) Query: 24 MLLWGALAGFVGALATIAFRECIALLQIWLTGHDGSFVDIAKGLSWPVRVLLPTCGGVIA 83 MLLWGALAGFVGALATIAFRECIALLQIW+TGHDGSFVDIAKGL W RVLLPTCGGV+A Sbjct: 1 MLLWGALAGFVGALATIAFRECIALLQIWMTGHDGSFVDIAKGLPWYTRVLLPTCGGVVA 60 Query: 84 GLFLVWAKRTPAGNGGDYMEAVAIGDGAIPVRNTLLRSISSLASIASGGSIGREGPMVQL 143 GLFLVWAKRTPAGNGGDYMEAVAIGDGAIPVRNTLLRSISSLASIASGGSIGREGPMVQL Sbjct: 61 GLFLVWAKRTPAGNGGDYMEAVAIGDGAIPVRNTLLRSISSLASIASGGSIGREGPMVQL 120 Query: 144 SALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYNAPIAGAFFITEIVLGSLVMESFGP 203 SALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYNAPIAGAFFITEIVLGSLVMESFGP Sbjct: 121 SALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYNAPIAGAFFITEIVLGSLVMESFGP 180 Query: 204 VVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVLLFLVLGVLAGILAPQFLRVLELGK 263 VVVASVVANITMRELPGYRAAYEMPYFPEIGGWEV+LFLVLGVLAG+LAPQFLRVLELGK Sbjct: 181 VVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVMLFLVLGVLAGVLAPQFLRVLELGK 240 Query: 264 QGFGKFKLPLPVRLGVGGLLVGLISIEVPEVWGNGYSLVNSLLHTTWLWQAVLMVLVIKV 323 GFGK +LPLPVRLGVGGLLVGLIS++VPEVWGNGYSLVNSLLHT+W+WQAVLMVLV+KV Sbjct: 241 HGFGKLRLPLPVRLGVGGLLVGLISVQVPEVWGNGYSLVNSLLHTSWVWQAVLMVLVVKV 300 Query: 324 LATAITVGSGAVGGIFTPTLFVGAAVGYLFGDTAQALLPFHMSQPFAYAMVGMGAFLAAA 383 LAT+ITVGSGAVGGIFTPTLFVGAAVGYLFGD AQALLP H+SQPFAYAMVGMGAFLAAA Sbjct: 301 LATSITVGSGAVGGIFTPTLFVGAAVGYLFGDAAQALLPVHISQPFAYAMVGMGAFLAAA 360 Query: 384 SYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSTDGRSMYEITLKRHRDNEERLRL 443 SYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARS DGRSMYEITLKRHRDNEERLRL Sbjct: 361 SYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSVDGRSMYEITLKRHRDNEERLRL 420 Query: 444 RGTHMSDLIRPADTVLSETASLEEVSALFLKYPVKYVYIVDAHERYQGVVALQDITSWLL 503 RGTHMS+LIRPA+TVL E ASLEE+SALFLKYPVKYVYIVD +RY GVVALQDITSWLL Sbjct: 421 RGTHMSELIRPAETVLHEEASLEEISALFLKYPVKYVYIVDGRQRYLGVVALQDITSWLL 480 Query: 504 DKKEPAGRVARDFLRPHFLHEVTPDMSLGEALQLFLDHQGERLPVIASAEDPRLLGVVFK 563 DKKE AGRVARDFLRPHFLHEVTPDMSLGEALQLFLDHQGERLPVIASA+DP+LLGVVFK Sbjct: 481 DKKEAAGRVARDFLRPHFLHEVTPDMSLGEALQLFLDHQGERLPVIASADDPQLLGVVFK 540 Query: 564 TSLLDAYFRLDRAGN 578 TSLLDAYFRLDRAGN Sbjct: 541 TSLLDAYFRLDRAGN 555 >ref|YP_004752221.1| putative chloride channel family protein [Collimonas fungivorans Ter331] gb|AEK61398.1| Putative chloride channel family protein [Collimonas fungivorans Ter331] Length = 587 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 416/571 (72%), Positives = 478/571 (83%) Query: 6 IKYRLRVLNACRVSENHSMLLWGALAGFVGALATIAFRECIALLQIWLTGHDGSFVDIAK 65 ++YR+R+ SE+HSMLLW A+ GF+GALAT+ FRECI LQ LTGH GSFV +AK Sbjct: 12 LRYRIRLQRLFHFSESHSMLLWAAVVGFLGALATVLFRECIYGLQQLLTGHSGSFVAMAK 71 Query: 66 GLSWPVRVLLPTCGGVIAGLFLVWAKRTPAGNGGDYMEAVAIGDGAIPVRNTLLRSISSL 125 L W +R+LLP GG++AG LV AKR P+ DYMEAVAIGDG IPVR +LLRS+SSL Sbjct: 72 SLPWSMRLLLPAAGGLLAGAILVLAKRVPSSATSDYMEAVAIGDGNIPVRQSLLRSLSSL 131 Query: 126 ASIASGGSIGREGPMVQLSALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYNAPIAGA 185 A++ SGGSIGREGPMVQL+AL ASLVG+F+HF +RLRLLVACGAAAGITSAYNAPIAGA Sbjct: 132 ATVVSGGSIGREGPMVQLAALAASLVGRFTHFSPARLRLLVACGAAAGITSAYNAPIAGA 191 Query: 186 FFITEIVLGSLVMESFGPVVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVLLFLVLG 245 FF+TEIVLG++VMESFGPVVVASVVANITMRELPGY AYEMP FP + G E+L F++LG Sbjct: 192 FFVTEIVLGAIVMESFGPVVVASVVANITMRELPGYHPAYEMPPFPPVAGIEILWFVLLG 251 Query: 246 VLAGILAPQFLRVLELGKQGFGKFKLPLPVRLGVGGLLVGLISIEVPEVWGNGYSLVNSL 305 ++AGI APQFLR+L K F + LPLP+RLG+GGLLVGLIS+ +PEVWGNGYS+VNSL Sbjct: 252 IMAGIAAPQFLRLLAFSKHMFTRTALPLPLRLGLGGLLVGLISVWMPEVWGNGYSVVNSL 311 Query: 306 LHTTWLWQAVLMVLVIKVLATAITVGSGAVGGIFTPTLFVGAAVGYLFGDTAQALLPFHM 365 LHT WLW +VL+VLV+KVLATAIT GSGAVGGIFTPTLFVGAA+GYLFG +LP Sbjct: 312 LHTPWLWWSVLLVLVLKVLATAITTGSGAVGGIFTPTLFVGAAIGYLFGQLLHIVLPDLT 371 Query: 366 SQPFAYAMVGMGAFLAAASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSTDGRS 425 S PFAYAMVGMGAFLAAA+ APLMAILMIFEMTLSYQVVLPLMLSCVVAY +ARS +G S Sbjct: 372 SAPFAYAMVGMGAFLAAATSAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFIARSINGAS 431 Query: 426 MYEITLKRHRDNEERLRLRGTHMSDLIRPADTVLSETASLEEVSALFLKYPVKYVYIVDA 485 MY+IT+KR+RD +ER+RLRG HM++LIRPADTVL TA E+S LFLKYPVKY+YIVD Sbjct: 432 MYDITIKRNRDAQERVRLRGIHMNELIRPADTVLPLTAPFAEISGLFLKYPVKYIYIVDQ 491 Query: 486 HERYQGVVALQDITSWLLDKKEPAGRVARDFLRPHFLHEVTPDMSLGEALQLFLDHQGER 545 RY GVVALQDITS LL K E G+VA DF+R FLH VTP+MSLG+ALQ FLDHQGER Sbjct: 492 RNRYCGVVALQDITSCLLAKSETQGKVAADFIRREFLHVVTPEMSLGDALQSFLDHQGER 551 Query: 546 LPVIASAEDPRLLGVVFKTSLLDAYFRLDRA 576 LPV+ S EDP LLG V+KTSLLDAYFRLDR+ Sbjct: 552 LPVVRSHEDPELLGAVYKTSLLDAYFRLDRS 582 >ref|ZP_06842894.1| Cl- channel voltage-gated family protein [Burkholderia sp. Ch1-1] gb|EFG69348.1| Cl- channel voltage-gated family protein [Burkholderia sp. Ch1-1] Length = 577 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 365/575 (63%), Positives = 448/575 (77%), Gaps = 2/575 (0%) Query: 1 MHELWIKYRLRVLNACRVSENHSMLLWGALAGFVGALATIAFRECIALLQIWLTGHDGSF 60 M +K R R + R+SE H+ML+W + G GA ATIAFRE IALLQ + G GSF Sbjct: 1 MLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGIALLQFAVVGKAGSF 60 Query: 61 VDIAKGLSWPVRVLLPTCGGVIAGLFLVWAKR-TPAGNGGDYMEAVAIGDGAIPVRNTLL 119 V++A+ L W VR+ LP GG+IAG FL+ A+R GN DYMEAVAIGDG +PV+ +L Sbjct: 61 VEMARSLPWTVRIWLPAAGGLIAGFFLLIARRYEDKGNHVDYMEAVAIGDGVVPVKLSLW 120 Query: 120 RSISSLASIASGGSIGREGPMVQLSALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYN 179 RS+SSL +I+SGGSIGREGPMVQL+AL ASL+G++ HF SRLRLLVACGAAAGITSAY+ Sbjct: 121 RSVSSLFTISSGGSIGREGPMVQLAALAASLIGRWVHFDPSRLRLLVACGAAAGITSAYS 180 Query: 180 APIAGAFFITEIVLGSLVMESFGPVVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVL 239 APIAGAFF+TEIVLGS+ MESFGPVVV++VVANITMRE GYR YEMP FP + G EVL Sbjct: 181 APIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPYEMPVFPPVAGLEVL 240 Query: 240 LFLVLGVLAGILAPQFLRVLELGKQGFGKFKLPLPVRLGVGGLLVGLISIEVPEVWGNGY 299 LF+ LG+L G APQFLR+L++ K+ F K +PLPVRL +GGL+VG++S+ PEVWGNGY Sbjct: 241 LFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVGILSVRTPEVWGNGY 300 Query: 300 SLVNSLLHTTWLWQAVLMVLVIKVLATAITVGSGAVGGIFTPTLFVGAAVGYLFGDTAQA 359 S+VNS+LH+ W W A+++VLV K++ATA T GSGAVGG+FTPTLFVGA VG LFG A Sbjct: 301 SVVNSILHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFVGAVVGSLFGQGMHA 360 Query: 360 LLPFHMSQPFAYAMVGMGAFLAAASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVAR 419 L P S PFAYAMVGMGAFLA A+ APLMAILMIFEMTLSYQVVLPLMLSCVVAY V+R Sbjct: 361 LWPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSR 420 Query: 420 STDGRSMYEITLKRHRDNEERLRLRGTHMSDLIRPADTVLSETASLEEVSALFLKYPVKY 479 + SMYEITL+R+ +ER RLR T M +LIRPA+TV+ A++ +++ +FL+YPVKY Sbjct: 421 AIGKTSMYEITLRRNHQEQERSRLRATQMRELIRPAETVVPPNATVHDMTRVFLEYPVKY 480 Query: 480 VYIVDAHERYQGVVALQDITSWLLDKKEPAGRVARDFLRPHFLHEVTPDMSLGEALQLFL 539 +Y+ + + GVVAL+DITS LLD ++ + + A D+L+PHF +TPDM LG ALQ FL Sbjct: 481 LYVANESGAFLGVVALKDITSDLLDGRDTSTKTAADYLQPHF-DVLTPDMPLGVALQHFL 539 Query: 540 DHQGERLPVIASAEDPRLLGVVFKTSLLDAYFRLD 574 QGERLPV+ SA P L GVV+KTSLLDAYFR++ Sbjct: 540 AFQGERLPVVESAAHPTLAGVVYKTSLLDAYFRMN 574 >ref|YP_559043.1| putative voltage-gated ClC-type chloride channel ClcB [Burkholderia xenovorans LB400] gb|ABE30991.1| Putative chloride channel family protein, clcB- like protein [Burkholderia xenovorans LB400] Length = 591 Score = 672 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 363/570 (63%), Positives = 445/570 (78%), Gaps = 2/570 (0%) Query: 6 IKYRLRVLNACRVSENHSMLLWGALAGFVGALATIAFRECIALLQIWLTGHDGSFVDIAK 65 +K R R + R+SE H+ML+W + G GA ATIAFRE IALLQ + G GSFV++A+ Sbjct: 20 LKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGIALLQTAVVGKAGSFVEMAR 79 Query: 66 GLSWPVRVLLPTCGGVIAGLFLVWAKR-TPAGNGGDYMEAVAIGDGAIPVRNTLLRSISS 124 L W VR+ LP GG+IAG FL+ A+R N DYMEAVAIGDG +PV+ + RS+SS Sbjct: 80 SLPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAVAIGDGVVPVKLSFWRSVSS 139 Query: 125 LASIASGGSIGREGPMVQLSALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYNAPIAG 184 L +I+SGGSIGREGPMVQL+AL ASL+G++ HF +RLRLLVACGAAAGITSAY+APIAG Sbjct: 140 LFTISSGGSIGREGPMVQLAALAASLIGRWVHFDPARLRLLVACGAAAGITSAYSAPIAG 199 Query: 185 AFFITEIVLGSLVMESFGPVVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVLLFLVL 244 AFF+TEIVLGS+ MESFGPVVV++VVANITMRE GYR YEMP FP + G EVLLF+ L Sbjct: 200 AFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPYEMPVFPPVAGLEVLLFVAL 259 Query: 245 GVLAGILAPQFLRVLELGKQGFGKFKLPLPVRLGVGGLLVGLISIEVPEVWGNGYSLVNS 304 G+L G APQFLR+L++ K+ F K +PLPVRL +GGL+VG++S+ PEVWGNGYS+VNS Sbjct: 260 GLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNS 319 Query: 305 LLHTTWLWQAVLMVLVIKVLATAITVGSGAVGGIFTPTLFVGAAVGYLFGDTAQALLPFH 364 +LH+ W W A+++VLV K++ATA T GSGAVGG+FTPTLFVGA VG LFG AL P Sbjct: 320 ILHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHG 379 Query: 365 MSQPFAYAMVGMGAFLAAASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSTDGR 424 S PFAYAMVGMGAFLA A+ APLMAILMIFEMTLSYQVVLPLMLSCVVAY V+R+ Sbjct: 380 TSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRAIGKT 439 Query: 425 SMYEITLKRHRDNEERLRLRGTHMSDLIRPADTVLSETASLEEVSALFLKYPVKYVYIVD 484 SMYEITL+R+ + +ER RLR T M +LIRPA+TV+ A++ E++ +FL+YPVKY+Y+ Sbjct: 440 SMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATVHEMTRVFLEYPVKYLYVAS 499 Query: 485 AHERYQGVVALQDITSWLLDKKEPAGRVARDFLRPHFLHEVTPDMSLGEALQLFLDHQGE 544 + GVVAL+DITS LLD ++ A + A D+L+PHF +TPDM LG ALQ FL QGE Sbjct: 500 ESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHF-DVLTPDMPLGVALQHFLAFQGE 558 Query: 545 RLPVIASAEDPRLLGVVFKTSLLDAYFRLD 574 RLPV+ SA P L GVV+KTSLLDAYFR++ Sbjct: 559 RLPVVESAAHPTLAGVVYKTSLLDAYFRMN 588 >ref|ZP_02355528.1| putative voltage-gated ClC-type chloride channel ClcB [Burkholderia oklahomensis EO147] Length = 577 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 360/575 (62%), Positives = 439/575 (76%), Gaps = 2/575 (0%) Query: 1 MHELWIKYRLRVLNACRVSENHSMLLWGALAGFVGALATIAFRECIALLQIWLTGHDGSF 60 M +K R R R+S+ H+ML+W + G GALAT+AFRE I L+Q ++G GSF Sbjct: 1 MLSFLLKLRTRAQTLFRLSDAHTMLVWSVIVGIGGALATVAFREGIELIQRAVSGTSGSF 60 Query: 61 VDIAKGLSWPVRVLLPTCGGVIAGLFLVWAKRTPAGNG-GDYMEAVAIGDGAIPVRNTLL 119 ++AK L W VR LP GG +AG L+ A+R DYMEAVA+GDG +PVR +L Sbjct: 61 TEMAKRLPWQVRFWLPAAGGFLAGCVLLVAQRGARKESKSDYMEAVALGDGIVPVRQSLW 120 Query: 120 RSISSLASIASGGSIGREGPMVQLSALCASLVGKFSHFPSSRLRLLVACGAAAGITSAYN 179 RS SSL +I SGGSIGREGPMVQL+AL ASLVG+F+HF RLRLLVACGAAAGITSAYN Sbjct: 121 RSASSLLTIGSGGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYN 180 Query: 180 APIAGAFFITEIVLGSLVMESFGPVVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVL 239 APIAGAFF+ EIVLGS+ MESFGPVVVASVVANI MRE GY+ YEMP FP + GWEVL Sbjct: 181 APIAGAFFVCEIVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYEMPVFPAVAGWEVL 240 Query: 240 LFLVLGVLAGILAPQFLRVLELGKQGFGKFKLPLPVRLGVGGLLVGLISIEVPEVWGNGY 299 F+ LG+L G APQFLR+L+L K F + PLPVRL +GGL+VG+IS+ VP+VWGNGY Sbjct: 241 FFVALGLLCGAAAPQFLRLLDLSKTQFKRLPAPLPVRLALGGLVVGVISVWVPDVWGNGY 300 Query: 300 SLVNSLLHTTWLWQAVLMVLVIKVLATAITVGSGAVGGIFTPTLFVGAAVGYLFGDTAQA 359 S+VN++LHT W WQA++ VLV K++ATA T GSGAVGGIFTPTLFVGA VG LFG A Sbjct: 301 SVVNAILHTPWTWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVGSLFGIALHA 360 Query: 360 LLPFHMSQPFAYAMVGMGAFLAAASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVAR 419 L+P H+S +AYAMVGMGAFLA A+ APLMAILMIFEMTLSYQVVLPLM+SCVVAY AR Sbjct: 361 LMPAHVSAWYAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMMSCVVAYFAAR 420 Query: 420 STDGRSMYEITLKRHRDNEERLRLRGTHMSDLIRPADTVLSETASLEEVSALFLKYPVKY 479 + SMYEITL+RHRD+E R+RLR T M DLI+PA TV+ TAS+ +++ +FL+YPVKY Sbjct: 421 AIGKTSMYEITLRRHRDDEARMRLRTTQMRDLIQPAATVVPLTASVADMTRVFLEYPVKY 480 Query: 480 VYIVDAHERYQGVVALQDITSWLLDKKEPAGRVARDFLRPHFLHEVTPDMSLGEALQLFL 539 +Y+ D R++G VAL+DITS LL+K++ + A ++L F +TPDM +G AL+ F+ Sbjct: 481 LYVTDDAGRFRGAVALKDITSDLLEKRDTTHKRAANYLHTPF-PLLTPDMPIGAALEHFM 539 Query: 540 DHQGERLPVIASAEDPRLLGVVFKTSLLDAYFRLD 574 QGERLPV+ A+DP L GVV+KTSLLDAY RL+ Sbjct: 540 QFQGERLPVVERADDPTLAGVVYKTSLLDAYRRLN 574