BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1490.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775522.1| isocitrate lyase [Herbaspirillum seropedicae... 843 0.0 ref|YP_004752208.1| isocitrate lyase [Collimonas fungivorans Ter... 785 0.0 ref|YP_001353633.1| isocitrate lyase [Janthinobacterium sp. Mars... 772 0.0 ref|YP_296169.1| isocitrate lyase [Ralstonia eutropha JMP134] >g... 753 0.0 ref|YP_583537.1| isocitrate lyase [Cupriavidus metallidurans CH3... 753 0.0 >ref|YP_003775522.1| isocitrate lyase [Herbaspirillum seropedicae SmR1] gb|ADJ63614.1| isocitrate lyase protein [Herbaspirillum seropedicae SmR1] Length = 434 Score = 843 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 428/434 (98%), Positives = 433/434 (99%) Query: 24 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHD 83 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHT+AKRGADKLWNLV++ Sbjct: 1 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTIAKRGADKLWNLVNN 60 Query: 84 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 143 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK Sbjct: 61 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 120 Query: 144 RINNTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 203 RINNTFARADQIQWSEG+DDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED Sbjct: 121 RINNTFARADQIQWSEGKDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 180 Query: 204 QLASVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 263 QLASVKKCGHMGGKVLVPTREA EKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA Sbjct: 181 QLASVKKCGHMGGKVLVPTREAVEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 240 Query: 264 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 323 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA Sbjct: 241 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 300 Query: 324 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 383 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH Sbjct: 301 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 360 Query: 384 GYARNQMSAFVELQEAEFAAASKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 443 GYARNQMSAFVELQEAEFAAA+KGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST Sbjct: 361 GYARNQMSAFVELQEAEFAAATKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 420 Query: 444 EDEQFFDDKAKKAA 457 EDEQFFDDKAKKAA Sbjct: 421 EDEQFFDDKAKKAA 434 >ref|YP_004752208.1| isocitrate lyase [Collimonas fungivorans Ter331] gb|AEK61385.1| Isocitrate lyase [Collimonas fungivorans Ter331] Length = 431 Score = 785 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 390/429 (90%), Positives = 413/429 (96%) Query: 24 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHD 83 M+TREQQ+ AL +DWAENPRWKG+ RNYSA DVVRLRGS+QIEHTLAKRGADKLW L+H+ Sbjct: 1 MTTREQQVAALAKDWAENPRWKGVTRNYSAEDVVRLRGSVQIEHTLAKRGADKLWKLLHE 60 Query: 84 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 143 EPFVN+LGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVP+VVK Sbjct: 61 EPFVNSLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPLVVK 120 Query: 144 RINNTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 203 RINNTF RADQIQWSEG++DIDFFAPIVADAEAGFGGVLNA+ELMKSMI+AGAAGVHFED Sbjct: 121 RINNTFQRADQIQWSEGKNDIDFFAPIVADAEAGFGGVLNAYELMKSMIDAGAAGVHFED 180 Query: 204 QLASVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 263 QLASVKKCGHMGGKVLVP+REA EKLNAARLAADV GT TLVIARTDAEAADLLTSDVD Sbjct: 181 QLASVKKCGHMGGKVLVPSREAVEKLNAARLAADVSGTSTLVIARTDAEAADLLTSDVDE 240 Query: 264 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 323 NDKPFL+GERTVEGF+KT PGI+QAISR LAY+ YAD+VWCETGKPDLAFAK FAEA+HA Sbjct: 241 NDKPFLTGERTVEGFYKTRPGIEQAISRALAYSPYADLVWCETGKPDLAFAKKFAEAVHA 300 Query: 324 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 383 KFPGK+LAYNCSPSFNWKKNLDDATIAKFQ+ELGAMGYKFQFITLAGFHALNYSMFNLAH Sbjct: 301 KFPGKMLAYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAH 360 Query: 384 GYARNQMSAFVELQEAEFAAASKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 443 GYARNQMSAFVELQEAEFAAA KGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST Sbjct: 361 GYARNQMSAFVELQEAEFAAADKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 420 Query: 444 EDEQFFDDK 452 EDEQFF+ K Sbjct: 421 EDEQFFEAK 429 >ref|YP_001353633.1| isocitrate lyase [Janthinobacterium sp. Marseille] gb|ABR88903.1| isocitrate lyase [Janthinobacterium sp. Marseille] Length = 440 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 378/432 (87%), Positives = 407/432 (94%) Query: 24 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHD 83 M+ REQQI AL +DW ENPRWKG+ RNY+A DVVRLRGSLQ+EHTLA+RGADKLW + ++ Sbjct: 1 MANREQQIAALNKDWQENPRWKGVTRNYTAEDVVRLRGSLQVEHTLAQRGADKLWEMCNN 60 Query: 84 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 143 EPFVN+LGALTGNQAMQQVKAGLKAIYLSGWQVAGDAN+AGEMYPDQSLYPANSVP+VVK Sbjct: 61 EPFVNSLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANVAGEMYPDQSLYPANSVPLVVK 120 Query: 144 RINNTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 203 RINNTF ADQIQWSEG+ D+DFFAPIVADAEAGFGGVLNA+ELMK+MIEAGAAGVHFED Sbjct: 121 RINNTFQCADQIQWSEGKGDLDFFAPIVADAEAGFGGVLNAYELMKAMIEAGAAGVHFED 180 Query: 204 QLASVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 263 QLASVKKCGHMGGKVLVPTREA EKLNAARLAADV GT+TLVIARTDAEAADLLTSDVDA Sbjct: 181 QLASVKKCGHMGGKVLVPTREAVEKLNAARLAADVCGTRTLVIARTDAEAADLLTSDVDA 240 Query: 264 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 323 NDKPFL+GERTVEGF+KT G DQA+SRGLAYA Y DM+WCETGKPDL FA+ FA+AIHA Sbjct: 241 NDKPFLTGERTVEGFYKTRAGFDQAVSRGLAYAPYVDMLWCETGKPDLEFARQFADAIHA 300 Query: 324 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 383 KFPGK+LAYNCSPSFNW+KNLDDATIAKFQ+ELGAMGYKFQFITLAGFH+LNYSMFNLAH Sbjct: 301 KFPGKMLAYNCSPSFNWRKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNYSMFNLAH 360 Query: 384 GYARNQMSAFVELQEAEFAAASKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 443 GYARNQMSAFVELQEAEFAAA KGFTAVKHQREVGTGYFDA+TQ IQQGQSSTTALHGST Sbjct: 361 GYARNQMSAFVELQEAEFAAADKGFTAVKHQREVGTGYFDAITQVIQQGQSSTTALHGST 420 Query: 444 EDEQFFDDKAKK 455 EDEQFF+ K K Sbjct: 421 EDEQFFESKVAK 432 >ref|YP_296169.1| isocitrate lyase [Ralstonia eutropha JMP134] gb|AAZ61325.1| isocitrate lyase [Ralstonia eutropha JMP134] Length = 431 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 373/426 (87%), Positives = 398/426 (93%) Query: 27 REQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHDEPF 86 REQQIQAL++DW NPRWKGIKRN++A DVVRLRGS+Q+EHTLA+RG++KLWNL+H EPF Sbjct: 3 REQQIQALQKDWDTNPRWKGIKRNFTAEDVVRLRGSVQVEHTLARRGSEKLWNLLHTEPF 62 Query: 87 VNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVKRIN 146 VN+LGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVP VVKRIN Sbjct: 63 VNSLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPQVVKRIN 122 Query: 147 NTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFEDQLA 206 NTF RADQIQWSEG D DFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFEDQLA Sbjct: 123 NTFQRADQIQWSEGSGDTDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFEDQLA 182 Query: 207 SVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDANDK 266 SVKKCGHMGGKVLVPTREA KL AARLAADV G TLVIARTDAEAADLLTSDVD NDK Sbjct: 183 SVKKCGHMGGKVLVPTREAVAKLTAARLAADVSGVPTLVIARTDAEAADLLTSDVDDNDK 242 Query: 267 PFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHAKFP 326 PF +GERTVEGF++ G++Q+ISR LAYAE AD+VWCETGKPDL FAK FAEA+HAKFP Sbjct: 243 PFCTGERTVEGFYRVRNGLEQSISRALAYAEVADLVWCETGKPDLEFAKKFAEAVHAKFP 302 Query: 327 GKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAHGYA 386 GK+LAYNCSPSFNWKKNLDDATIA+FQRELGAMGYKFQFITLAGFH+LNYSMFNLA+GYA Sbjct: 303 GKMLAYNCSPSFNWKKNLDDATIARFQRELGAMGYKFQFITLAGFHSLNYSMFNLAYGYA 362 Query: 387 RNQMSAFVELQEAEFAAASKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGSTEDE 446 RNQMSAFVELQEAEF AA KGFTAVKHQREVGTGYFDAVTQAI+ GQSSTTAL GSTEDE Sbjct: 363 RNQMSAFVELQEAEFKAAEKGFTAVKHQREVGTGYFDAVTQAIEGGQSSTTALKGSTEDE 422 Query: 447 QFFDDK 452 QFF+DK Sbjct: 423 QFFEDK 428 >ref|YP_583537.1| isocitrate lyase [Cupriavidus metallidurans CH34] gb|ABF08268.1| isocitrate lyase [Cupriavidus metallidurans CH34] Length = 431 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 371/429 (86%), Positives = 404/429 (94%) Query: 24 MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHD 83 M++R+QQI+AL++DW NPRWKG+KRN++A DVVRLRGS+QIEHTLA+RGA+KLW+L++ Sbjct: 1 MTSRQQQIEALQKDWDTNPRWKGVKRNFTAEDVVRLRGSVQIEHTLARRGAEKLWHLLNT 60 Query: 84 EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 143 EPFVN LGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK Sbjct: 61 EPFVNTLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 120 Query: 144 RINNTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 203 RINNTF RADQIQWSEG+ DID+FAPIVADAEAGFGGVLNAFELMKSMI+AGAAGVHFED Sbjct: 121 RINNTFQRADQIQWSEGKGDIDYFAPIVADAEAGFGGVLNAFELMKSMIDAGAAGVHFED 180 Query: 204 QLASVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 263 QLASVKKCGHMGGKVLVPTREA KL AARLAADV G TLVIARTDAEAADL+TSDVD Sbjct: 181 QLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVSGVPTLVIARTDAEAADLVTSDVDE 240 Query: 264 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 323 D+PFL+GERTVEGFF++ PGI+Q+I+R LAYAE AD+VWCETGKPDL FAK FA+A+HA Sbjct: 241 RDQPFLTGERTVEGFFRSKPGIEQSIARALAYAEVADLVWCETGKPDLEFAKRFAQAVHA 300 Query: 324 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 383 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQ+ELGAMGYKFQFITLAGFH+LNYSMFNLAH Sbjct: 301 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNYSMFNLAH 360 Query: 384 GYARNQMSAFVELQEAEFAAASKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 443 GYARNQMSAFVELQEAEFAAA KGFTAVKHQREVGTGYFDAVTQ I+ GQSSTTAL GST Sbjct: 361 GYARNQMSAFVELQEAEFAAAEKGFTAVKHQREVGTGYFDAVTQTIEGGQSSTTALKGST 420 Query: 444 EDEQFFDDK 452 EDEQFF+ K Sbjct: 421 EDEQFFEKK 429