BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1484.p (863 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspi... 1474 0.0 emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) ... 1469 0.0 ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]... 1381 0.0 ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC... 1350 0.0 ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subun... 1338 0.0 >ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae SmR1] gb|ADJ63610.1| ATP-dependent Clp protease subunit (heat-shock) protein [Herbaspirillum seropedicae SmR1] Length = 861 Score = 1474 bits (3815), Expect = 0.0, Method: Composition-based stats. Identities = 839/860 (97%), Positives = 846/860 (98%), Gaps = 1/860 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQ+DGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 STALQPAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLADDKS 120 S ALQ AVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGL DDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAIKAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAI AVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKS+AQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEKALETQNKQDAASEQTVGKPRLVRTQVGAE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELE ALE QNK+DAA +T KP+LVRTQVGAE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKT-EKPKLVRTQVGAE 539 Query: 541 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 600 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP Sbjct: 540 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 599 Query: 601 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 660 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 600 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 659 Query: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 660 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 719 Query: 721 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 780 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA Sbjct: 720 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 779 Query: 781 KIQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 840 KIQLRILEQRLAKLEIGL+ISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA Sbjct: 780 KIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 839 Query: 841 GKFGPKDVVHVSVKNGALSF 860 GKFGPKDVV V V +G LSF Sbjct: 840 GKFGPKDVVRVDVDHGQLSF 859 >emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) protein [Herbaspirillum seropedicae] Length = 861 Score = 1469 bits (3804), Expect = 0.0, Method: Composition-based stats. Identities = 837/860 (97%), Positives = 844/860 (98%), Gaps = 1/860 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQ+DGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 STALQPAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLADDKS 120 S ALQ AVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGL DDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAIKAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAI AVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAG AEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGYAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALAR ELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARAELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKS+AQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEKALETQNKQDAASEQTVGKPRLVRTQVGAE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELE ALE QNK+DAA +T KP+LVRTQVGAE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKT-EKPKLVRTQVGAE 539 Query: 541 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 600 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP Sbjct: 540 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 599 Query: 601 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 660 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 600 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 659 Query: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 660 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 719 Query: 721 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 780 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA Sbjct: 720 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 779 Query: 781 KIQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 840 KIQLRILEQRLAKLEIGL+ISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA Sbjct: 780 KIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 839 Query: 841 GKFGPKDVVHVSVKNGALSF 860 GKFGPKDVV V V +G LSF Sbjct: 840 GKFGPKDVVRVDVDHGQLSF 859 >ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331] gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331] Length = 867 Score = 1381 bits (3574), Expect = 0.0, Method: Composition-based stats. Identities = 753/864 (87%), Positives = 814/864 (94%), Gaps = 3/864 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MR DKLTTKLQEA+ADAQSQAVG+DNQYI+PVH ++ALLNQDDG A SLLQRAGVNV L Sbjct: 1 MRFDKLTTKLQEAIADAQSQAVGNDNQYIDPVHALIALLNQDDGSATSLLQRAGVNVAAL 60 Query: 61 STALQPAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLADDKS 120 T L+ A++RLP+VSG GGEVQ+GREL+ALLNLADKEAQK GDQF+ASEM+LL L DDKS Sbjct: 61 ETGLKAALERLPKVSGAGGEVQIGRELLALLNLADKEAQKRGDQFIASEMLLLALLDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAIKAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGR ARENGLTRK+LEAAI AVRGGA+V+SQ EGQREALKKYTLDLTERAR GKLDPV Sbjct: 121 DAGRLARENGLTRKALEAAITAVRGGANVASQDGEGQREALKKYTLDLTERARLGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAK+RGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKFRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGV+ITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA+KIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREAV+REKDEASQKR LIEEEIEKL REYADLEEIWK+EK++AQG + LKEEIE Sbjct: 421 QLKIEREAVRREKDEASQKRFSLIEEEIEKLSREYADLEEIWKSEKASAQGSKHLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEKALETQNKQD---AASEQTVGKPRLVRTQV 537 K+RLQ++EATR SDWQKVSELKYGKL ELEKALETQ++QD AA G+P+LVRTQV Sbjct: 481 KLRLQIDEATRNSDWQKVSELKYGKLNELEKALETQSRQDALAAAHPDPDGRPQLVRTQV 540 Query: 538 GAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGL 597 GA+EIAEIV+RATGIPVS+M+QGER+KL+ MED LH+RVVGQ+EAIVAVSDAIRRSRAGL Sbjct: 541 GADEIAEIVSRATGIPVSKMLQGERDKLVKMEDELHKRVVGQNEAIVAVSDAIRRSRAGL 600 Query: 598 GDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPP 657 DP +PYGSFMFLGPTGVGKTELCKALA +LFD+ +A+IRIDMSEFMEKHSVARLIGAPP Sbjct: 601 SDPDRPYGSFMFLGPTGVGKTELCKALAGFLFDSTDALIRIDMSEFMEKHSVARLIGAPP 660 Query: 658 GYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN 717 GYVGYEEGGYLTE VRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN Sbjct: 661 GYVGYEEGGYLTELVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN 720 Query: 718 TVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIG 777 TVIVMTSNLGSH+IQ+ME SDPA+VK+ VMAEVR HFRPEFINR+DEIVVFHALD KNIG Sbjct: 721 TVIVMTSNLGSHRIQAMEGSDPAVVKMEVMAEVRNHFRPEFINRIDEIVVFHALDEKNIG 780 Query: 778 AIAKIQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQ 837 +IAKIQL+ILEQRLAK+++GL ISEAGLQKIAEAGFDPVYGARPLKRAIQQ+IENPLSK Sbjct: 781 SIAKIQLKILEQRLAKMDMGLVISEAGLQKIAEAGFDPVYGARPLKRAIQQQIENPLSKL 840 Query: 838 ILAGKFGPKDVVHVSVKNGALSFE 861 IL GKFGPKD+VH++V NG + F+ Sbjct: 841 ILEGKFGPKDIVHINVNNGEIVFK 864 >ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30751.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480] Length = 867 Score = 1350 bits (3494), Expect = 0.0, Method: Composition-based stats. Identities = 730/860 (84%), Positives = 810/860 (94%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEAL+DAQS AVG+DN YIEP HL++ALLNQDDGGA SLLQRAG N+ GL Sbjct: 1 MRLDKLTTKLQEALSDAQSLAVGNDNPYIEPAHLLVALLNQDDGGASSLLQRAGANIGGL 60 Query: 61 STALQPAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLADDKS 120 + AL+ A++RLP+VSG GGEVQVGREL ALLN+ADKEAQK GDQF+ASEMVLLGL DDKS Sbjct: 61 TAALKSALERLPKVSGTGGEVQVGRELGALLNVADKEAQKRGDQFIASEMVLLGLTDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAIKAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+AARENGLTRK+LEAAI+AVRGGASV+S EGQREAL KYT+DLTERAR GKLDPV Sbjct: 121 EAGKAARENGLTRKALEAAIEAVRGGASVNSADSEGQREALAKYTIDLTERARLGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAAL+AGAKYRGEFEERLKAVLK++A+DEGQTIVFIDELHTMVGAGKA+GAMDAGNMLK Sbjct: 241 DMAALVAGAKYRGEFEERLKAVLKDLAKDEGQTIVFIDELHTMVGAGKADGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKILV EPSVEATIAILRGLQE+YEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVAEPSVEATIAILRGLQERYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA+K+KIEIDS+PEVMDKLDRR I Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKVKIEIDSRPEVMDKLDRRTI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREA+K+EKDEASQ+RL LIEEEI + EREYADLEEIW+AEK+ QG Q +KEEIE Sbjct: 421 QLKIEREAIKKEKDEASQRRLALIEEEILRSEREYADLEEIWRAEKAAVQGSQHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEKALETQNKQDAASEQTVGKPRLVRTQVGAE 540 +VRLQM+EATRKSDW+ VSEL+YGKL ELEKALE Q++QD +++ KPRL+RTQVGAE Sbjct: 481 EVRLQMDEATRKSDWKTVSELQYGKLPELEKALEAQSRQDEQADKANTKPRLLRTQVGAE 540 Query: 541 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 600 EIAEIV+RATGIPVS+MMQGER+KL+HMED LH+RV+GQ EAIVAVSDAIRRSRAGL DP Sbjct: 541 EIAEIVSRATGIPVSKMMQGERDKLVHMEDFLHQRVIGQHEAIVAVSDAIRRSRAGLSDP 600 Query: 601 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 660 ++PYGSFMFLGPTGVGKTELCKALA +LFDTEE+MIRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 601 NRPYGSFMFLGPTGVGKTELCKALAGFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYV 660 Query: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 GY+EGG+LTEAVRR+PYSVILLDE+EKAH DVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 661 GYDEGGFLTEAVRRRPYSVILLDEVEKAHQDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 Query: 721 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 780 VMTSNLGSHKIQ+ME+S+PA+VK+AVMAEVR HFRPEFINR+DEIVVFHALD K+IGAIA Sbjct: 721 VMTSNLGSHKIQAMEESEPAVVKMAVMAEVRQHFRPEFINRIDEIVVFHALDEKHIGAIA 780 Query: 781 KIQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 840 +IQL+ILEQRL K+E+ L I++A LQKIAEAGFDPVYGARPLKRAIQQ+IENPLSKQIL Sbjct: 781 RIQLKILEQRLGKMEMRLDITDAALQKIAEAGFDPVYGARPLKRAIQQQIENPLSKQILE 840 Query: 841 GKFGPKDVVHVSVKNGALSF 860 GK+GPKD++ + V +G L+F Sbjct: 841 GKYGPKDLILIDVVSGELTF 860 >ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Janthinobacterium sp. Marseille] gb|ABR88285.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Janthinobacterium sp. Marseille] Length = 859 Score = 1338 bits (3463), Expect = 0.0, Method: Composition-based stats. Identities = 723/860 (84%), Positives = 796/860 (92%), Gaps = 4/860 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQDDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQS AVG+DNQYIEPVH+++ALL+QDD RSLLQRAG N+NG+ Sbjct: 1 MRLDKLTTKLQEALADAQSHAVGNDNQYIEPVHVLVALLSQDDSSTRSLLQRAGANINGM 60 Query: 61 STALQPAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLADDKS 120 +TAL+ A+ RLP+VSG GGEVQ+GR+L +LLNLADKE+Q HGDQF+A+EMVLL L +DKS Sbjct: 61 TTALRSALDRLPKVSGTGGEVQIGRDLSSLLNLADKESQMHGDQFIATEMVLLALTEDKS 120 Query: 121 DAGRAARENGLTRKSLEAAIKAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+ ARENGLTRK+LEAAIKAVRG + V S EGQREALKKYTLDLTERAR GKLDPV Sbjct: 121 EAGKIARENGLTRKALEAAIKAVRGSSKVDSADGEGQREALKKYTLDLTERARIGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLK KRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMA+LLAGAKYRGEFEERLKAVL E+A+DEGQTIVFIDE+HT+VGAGKAEGAMDAGNMLK Sbjct: 241 DMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKI+V EP+VEATIAILRGLQEKYE+H Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVAEPTVEATIAILRGLQEKYELH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIE+DSKPEVMDKLDRR+I Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRVI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIE 480 QLKIEREA+K+EKDEASQKRL LIEEEIE+L REYADLEEIWKAEKS+AQG Q +KEEIE Sbjct: 421 QLKIEREAIKKEKDEASQKRLALIEEEIERLGREYADLEEIWKAEKSSAQGSQHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEKALETQNKQDAASEQTVGKPRLVRTQVGAE 540 KVRLQMEEATRKSDWQ+VSEL+Y L +LE L K E + GKP+LVRTQVGAE Sbjct: 481 KVRLQMEEATRKSDWQRVSELQYSTLPQLEAQL----KNAVKGEVSAGKPQLVRTQVGAE 536 Query: 541 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 600 EIAE+V+RATGIPVSRMM GEREKLL MED LH+RVVGQ EAIVAVSDAIRRSRAGLGDP Sbjct: 537 EIAEVVSRATGIPVSRMMTGEREKLLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDP 596 Query: 601 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 660 +PYGSFMFLGPTGVGKTELCKALAS++FDTE+++IRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 597 DRPYGSFMFLGPTGVGKTELCKALASFMFDTEDSLIRIDMSEFMEKHSVARLIGAPPGYV 656 Query: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 GYEEGGYLTEAVRRKPY VILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 657 GYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 716 Query: 721 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 780 VMTSNLGSHKIQSME ++PAL+K+AVMAEV+ HFRPEFINR+DEIV FHALD KNIG+IA Sbjct: 717 VMTSNLGSHKIQSMEGNEPALIKMAVMAEVQGHFRPEFINRIDEIVAFHALDEKNIGSIA 776 Query: 781 KIQLRILEQRLAKLEIGLQISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 840 KIQL++LE+RLA++++ + +SE LQKIAEAGFDPVYGARPLKRAIQ +IENPLSK IL Sbjct: 777 KIQLQVLEKRLARMDMSMDVSEDALQKIAEAGFDPVYGARPLKRAIQHQIENPLSKAILE 836 Query: 841 GKFGPKDVVHVSVKNGALSF 860 GKFGPKDV+ + V++G L F Sbjct: 837 GKFGPKDVISLDVQDGELVF 856