BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1483.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775517.1| integral membrane protein [Herbaspirillum se...   189   9e-47
ref|YP_001353007.1| camphor resistance CrcB protein [Janthinobac...   141   4e-32
ref|YP_001100405.1| hypothetical protein HEAR2145 [Herminiimonas...   137   5e-31
ref|ZP_04576325.1| camphor resistance CrcB protein [Oxalobacter ...   123   8e-27
ref|ZP_04579106.1| camphor resistance CrcB protein [Oxalobacter ...   121   4e-26

>ref|YP_003775517.1| integral membrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63609.1| integral membrane protein [Herbaspirillum seropedicae SmR1]
          Length = 124

 Score =  189 bits (481), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 115/124 (92%), Positives = 117/124 (94%)

Query: 1   MAWLAVGMGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALA 60
           M WLAVGMGA LGAWLRWRISVVWNV GHFVPLGTLAANWIGA VIGFLVAYFEQHP L 
Sbjct: 1   MGWLAVGMGATLGAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLP 60

Query: 61  PEWRLFAVTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYR 120
           PEWRLFAVTG LGGLTTFSTFSAE+MILLQRGDYLWAIGHSGLHLLGS+VLCVAGFASYR
Sbjct: 61  PEWRLFAVTGFLGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGFASYR 120

Query: 121 ALAG 124
           ALAG
Sbjct: 121 ALAG 124


>ref|YP_001353007.1| camphor resistance CrcB protein [Janthinobacterium sp. Marseille]
 gb|ABR90362.1| camphor resistance CrcB protein [Janthinobacterium sp. Marseille]
          Length = 124

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 80/124 (64%), Positives = 102/124 (82%)

Query: 1   MAWLAVGMGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALA 60
           M+WLAVG+GAALGAWLRW +S+ +N   + VP+GTLAAN +G  ++G  VA+F  HP + 
Sbjct: 1   MSWLAVGLGAALGAWLRWGLSIWFNAVNNHVPVGTLAANLVGGYLVGLAVAFFSGHPGVP 60

Query: 61  PEWRLFAVTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYR 120
           PEWRLFAVTG LGGLTTFSTFSAE+++LLQRGDY+WA+ H+ LHL+GS+  C+AGFA+YR
Sbjct: 61  PEWRLFAVTGFLGGLTTFSTFSAEAVLLLQRGDYMWALAHTALHLIGSIACCIAGFATYR 120

Query: 121 ALAG 124
           A A 
Sbjct: 121 AFAA 124


>ref|YP_001100405.1| hypothetical protein HEAR2145 [Herminiimonas arsenicoxydans]
 emb|CAL62282.1| Protein CrcB homolog [Herminiimonas arsenicoxydans]
          Length = 130

 Score =  137 bits (345), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 100/122 (81%)

Query: 1   MAWLAVGMGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALA 60
           ++WLA+G GAALGAWLRW +SV +N     +PLGTL AN  G  ++G  VA+F  HP + 
Sbjct: 8   VSWLAIGFGAALGAWLRWGLSVWFNPLNANIPLGTLMANLGGGYLVGIAVAFFTGHPDVP 67

Query: 61  PEWRLFAVTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYR 120
           PEWRLFAVTG+LGGLTTFSTFSAE+++LLQRGDYLWA+GH+ LHLLGS++ C+AGFA+Y+
Sbjct: 68  PEWRLFAVTGILGGLTTFSTFSAEAVLLLQRGDYLWALGHTMLHLLGSILFCIAGFATYK 127

Query: 121 AL 122
           A 
Sbjct: 128 AF 129


>ref|ZP_04576325.1| camphor resistance CrcB protein [Oxalobacter formigenes HOxBLS]
 gb|EEO27287.1| camphor resistance CrcB protein [Oxalobacter formigenes HOxBLS]
          Length = 125

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 72/124 (58%), Positives = 95/124 (76%)

Query: 1   MAWLAVGMGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALA 60
           M+WLAVG+GAA+GAWLRW + ++ N     +PLGTL AN  G  VIG  +A+F  H  ++
Sbjct: 1   MSWLAVGLGAAIGAWLRWGLGMLMNSIHQHIPLGTLVANLSGGYVIGLAMAFFYGHNGIS 60

Query: 61  PEWRLFAVTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYR 120
           PEWRLFA+TG LGGLTTFSTFSAE++++LQRG+YLWA     LH+ G+++LC+ GFASYR
Sbjct: 61  PEWRLFAITGFLGGLTTFSTFSAETVLMLQRGEYLWAGLQVVLHVAGAILLCMGGFASYR 120

Query: 121 ALAG 124
             +G
Sbjct: 121 YFSG 124


>ref|ZP_04579106.1| camphor resistance CrcB protein [Oxalobacter formigenes OXCC13]
 gb|EEO30079.1| camphor resistance CrcB protein [Oxalobacter formigenes OXCC13]
          Length = 125

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 69/123 (56%), Positives = 93/123 (75%)

Query: 1   MAWLAVGMGAALGAWLRWRISVVWNVDGHFVPLGTLAANWIGAGVIGFLVAYFEQHPALA 60
           M+WLAVG+GAA+GAW RW + +  N     +PLGTL AN +G  +IG   ++F  H  L+
Sbjct: 1   MSWLAVGLGAAIGAWSRWCLGMWMNNIHQHIPLGTLVANLVGGFIIGMATSFFFWHNNLS 60

Query: 61  PEWRLFAVTGVLGGLTTFSTFSAESMILLQRGDYLWAIGHSGLHLLGSVVLCVAGFASYR 120
           PEWRLF +TG LGGLTTFSTFSAE++++LQRG+YLWA     LH+ GS+++C+AGFA+YR
Sbjct: 61  PEWRLFIITGFLGGLTTFSTFSAETVLMLQRGEYLWASVQILLHVAGSILMCIAGFAAYR 120

Query: 121 ALA 123
            L+
Sbjct: 121 YLS 123