BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1470.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02891316.1| protein of unknown function DUF817 [Burkholde... 398 e-109 ref|ZP_08529508.1| hypothetical protein AGRO_3511 [Agrobacterium... 397 e-108 gb|EGP56679.1| hypothetical protein Agau_C200615 [Agrobacterium ... 395 e-108 ref|NP_354897.2| hypothetical protein Atu1921 [Agrobacterium tum... 393 e-107 ref|YP_004279174.1| hypothetical protein AGROH133_07113 [Agrobac... 392 e-107 >ref|ZP_02891316.1| protein of unknown function DUF817 [Burkholderia ambifaria IOP40-10] gb|EDT03105.1| protein of unknown function DUF817 [Burkholderia ambifaria IOP40-10] Length = 271 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 206/269 (76%), Positives = 238/269 (88%) Query: 10 LSSSIPSEATGWRRFVLEFLMFGLKEARCCLFAGLFFAAVFLMPRAGLFGIPRYDALLLF 69 ++ +P G+ RFV EF FGLKEAR CLFAGLFF AVF PRAGL+G+PRYD LL+ Sbjct: 1 MAPPLPGRLDGFSRFVREFFFFGLKEARSCLFAGLFFLAVFATPRAGLWGVPRYDVLLIA 60 Query: 70 ALLVQVWMVSTRIETIAELKAISVFHVVGFALEVFKTSGAIQSWSYPDFAYTKLFGVPLF 129 ALL+QV MV T +ET+ ELK IS+FH VGFALEVFKTSG+IQSW+YPD AYTKL+GVPLF Sbjct: 61 ALLIQVAMVCTHLETLDELKVISLFHCVGFALEVFKTSGSIQSWAYPDPAYTKLWGVPLF 120 Query: 130 SGFMYAAVGSYIIQAWRLFDLRIQHHPPYWMATLIALLIYVNFFTHHYIGDYRWYLAACA 189 SGFMYAAVGSYIIQAWRLFDL I+HHPP+WMA LIA+LIYVNFFTHHYIGDYRWYLAACA Sbjct: 121 SGFMYAAVGSYIIQAWRLFDLHIRHHPPHWMAALIAVLIYVNFFTHHYIGDYRWYLAACA 180 Query: 190 LGLYARSTVLFRPLDRDRKMPLLLAFLLIGFFIWLAENISTFFGIWRYPNQMGAWSTVHL 249 LGLYAR+TV+FRPLDR+ +MPLLLAF+LIG FIWLAENISTF G+WRYPNQ+GAWS VH+ Sbjct: 181 LGLYARTTVVFRPLDRNYQMPLLLAFVLIGGFIWLAENISTFAGVWRYPNQIGAWSAVHV 240 Query: 250 GKWSAWSLLVMMTFTIVVHLKHIRSKIHI 278 GKWS+WS+LV+MTFTIV +LKHI+ +IH+ Sbjct: 241 GKWSSWSMLVIMTFTIVANLKHIKQRIHV 269 >ref|ZP_08529508.1| hypothetical protein AGRO_3511 [Agrobacterium sp. ATCC 31749] gb|EGL63442.1| hypothetical protein AGRO_3511 [Agrobacterium sp. ATCC 31749] Length = 298 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 198/278 (71%), Positives = 243/278 (87%), Gaps = 1/278 (0%) Query: 2 RLAKIDQYLSSSIP-SEATGWRRFVLEFLMFGLKEARCCLFAGLFFAAVFLMPRAGLFGI 60 RL+ +D L + P E G RRFV+EFL FG+KEAR CLFAGLFF ++F++P GLFG+ Sbjct: 19 RLSVLDNLLCDTYPWGELKGIRRFVIEFLYFGIKEARACLFAGLFFISIFVVPHGGLFGV 78 Query: 61 PRYDALLLFALLVQVWMVSTRIETIAELKAISVFHVVGFALEVFKTSGAIQSWSYPDFAY 120 PRYD LL+ AL +Q +M+ +R+ET+ E KAI +FH+VGFALEVFKTS AIQSWSYPDFAY Sbjct: 79 PRYDVLLIIALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAY 138 Query: 121 TKLFGVPLFSGFMYAAVGSYIIQAWRLFDLRIQHHPPYWMATLIALLIYVNFFTHHYIGD 180 +K+ GVPLFSGFMYAAVGSYIIQAWRL D+RI+H+P YWMATLI + IY NFFTHH+IGD Sbjct: 139 SKVLGVPLFSGFMYAAVGSYIIQAWRLLDVRIRHYPTYWMATLIGIAIYANFFTHHFIGD 198 Query: 181 YRWYLAACALGLYARSTVLFRPLDRDRKMPLLLAFLLIGFFIWLAENISTFFGIWRYPNQ 240 YRWY+AACA+GLY+R+TV++RP DRDRKMPLLL+F+LIGFF+WLAENISTFFGIW+YP+Q Sbjct: 199 YRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENISTFFGIWKYPDQ 258 Query: 241 MGAWSTVHLGKWSAWSLLVMMTFTIVVHLKHIRSKIHI 278 +GAWS VH+GKWS+WSLLV+MTFTIV LKHI+++IH+ Sbjct: 259 IGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHV 296 >gb|EGP56679.1| hypothetical protein Agau_C200615 [Agrobacterium tumefaciens F2] Length = 290 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 199/278 (71%), Positives = 242/278 (87%), Gaps = 1/278 (0%) Query: 2 RLAKIDQYLSSSIP-SEATGWRRFVLEFLMFGLKEARCCLFAGLFFAAVFLMPRAGLFGI 60 RL+ +D L + P E G RRF++EFL FG+KEAR C+FAGLFF ++F++P G+ GI Sbjct: 11 RLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACMFAGLFFVSIFVVPHGGVLGI 70 Query: 61 PRYDALLLFALLVQVWMVSTRIETIAELKAISVFHVVGFALEVFKTSGAIQSWSYPDFAY 120 PRYD LL+ AL +Q +M+ +R+ET+ E KAI +FH+VGFALEVFKTS AIQSWSYPDFAY Sbjct: 71 PRYDVLLIIALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAY 130 Query: 121 TKLFGVPLFSGFMYAAVGSYIIQAWRLFDLRIQHHPPYWMATLIALLIYVNFFTHHYIGD 180 TK+ GVPLFSGFMYAAVGSYIIQAWRL D+RI+H+P YWMATLI + IY NFFTHH+IGD Sbjct: 131 TKVLGVPLFSGFMYAAVGSYIIQAWRLLDVRIRHYPTYWMATLIGIAIYANFFTHHFIGD 190 Query: 181 YRWYLAACALGLYARSTVLFRPLDRDRKMPLLLAFLLIGFFIWLAENISTFFGIWRYPNQ 240 YRWY+AACA+GLY+R+TV+FRP DRDRKMPLLLAF+LIGFF+WLAENISTFFGIW+YP+Q Sbjct: 191 YRWYIAACAIGLYSRATVIFRPYDRDRKMPLLLAFILIGFFVWLAENISTFFGIWKYPDQ 250 Query: 241 MGAWSTVHLGKWSAWSLLVMMTFTIVVHLKHIRSKIHI 278 +GAWS VH+GKWS+WSLLV+MTFTIV HLKHI+ +IH+ Sbjct: 251 LGAWSVVHIGKWSSWSLLVIMTFTIVAHLKHIKRRIHV 288 >ref|NP_354897.2| hypothetical protein Atu1921 [Agrobacterium tumefaciens str. C58] gb|AAK87682.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 290 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 198/278 (71%), Positives = 243/278 (87%), Gaps = 1/278 (0%) Query: 2 RLAKIDQYLSSSIP-SEATGWRRFVLEFLMFGLKEARCCLFAGLFFAAVFLMPRAGLFGI 60 RL+ +D L + P E G RRF++EFL FG+KEAR CLFAGLFF ++F++P GLFGI Sbjct: 11 RLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIFVVPHGGLFGI 70 Query: 61 PRYDALLLFALLVQVWMVSTRIETIAELKAISVFHVVGFALEVFKTSGAIQSWSYPDFAY 120 PRYD LL+ AL +Q +M+ +R+ET+ E KAI +FH+VGFALEVFKTS AIQSWSYPDFAY Sbjct: 71 PRYDVLLIIALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAY 130 Query: 121 TKLFGVPLFSGFMYAAVGSYIIQAWRLFDLRIQHHPPYWMATLIALLIYVNFFTHHYIGD 180 +K+ GVPLFSGFMYAAVGSYIIQAWRL D+RI+H+P YWMATLI + IY NFFTHH+IGD Sbjct: 131 SKVLGVPLFSGFMYAAVGSYIIQAWRLLDVRIRHYPTYWMATLIGIAIYANFFTHHFIGD 190 Query: 181 YRWYLAACALGLYARSTVLFRPLDRDRKMPLLLAFLLIGFFIWLAENISTFFGIWRYPNQ 240 YRWY+AACA+GLY+R+TV++RP DRDRKMPLLL+F+LIGFF+WLAENISTFFGIW+YP+Q Sbjct: 191 YRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENISTFFGIWKYPDQ 250 Query: 241 MGAWSTVHLGKWSAWSLLVMMTFTIVVHLKHIRSKIHI 278 +GAWS VH+GKWS+WSLLV+MTFTIV LKHI+++IH+ Sbjct: 251 IGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHV 288 >ref|YP_004279174.1| hypothetical protein AGROH133_07113 [Agrobacterium sp. H13-3] gb|ADY64854.1| hypothetical protein AGROH133_07113 [Agrobacterium sp. H13-3] Length = 290 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 198/278 (71%), Positives = 242/278 (87%), Gaps = 1/278 (0%) Query: 2 RLAKIDQYLSSSIP-SEATGWRRFVLEFLMFGLKEARCCLFAGLFFAAVFLMPRAGLFGI 60 RL+ +D L + P E G RRFV+EFL FG+KEAR CLFAGLFF ++F++P G+FGI Sbjct: 11 RLSVLDNLLCDTYPWGELKGIRRFVIEFLYFGIKEARACLFAGLFFISIFVVPHGGVFGI 70 Query: 61 PRYDALLLFALLVQVWMVSTRIETIAELKAISVFHVVGFALEVFKTSGAIQSWSYPDFAY 120 PRYD LL+ AL +Q +M+ +R+ET+ E KAI +FH+VGFALEVFKTS AIQSWSYPDFAY Sbjct: 71 PRYDVLLIVALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAY 130 Query: 121 TKLFGVPLFSGFMYAAVGSYIIQAWRLFDLRIQHHPPYWMATLIALLIYVNFFTHHYIGD 180 +K+ GVPLFSGFMYAAVGSYIIQAWRL DLRI+++P YWMATLI + IY NFFTHH+IGD Sbjct: 131 SKVLGVPLFSGFMYAAVGSYIIQAWRLLDLRIRNYPTYWMATLIGIAIYANFFTHHFIGD 190 Query: 181 YRWYLAACALGLYARSTVLFRPLDRDRKMPLLLAFLLIGFFIWLAENISTFFGIWRYPNQ 240 YRWY+AACA+GLY+R+TV++RP DRDRKMPLLL+F+LIGFF+WLAENISTFFGIW+YP+Q Sbjct: 191 YRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENISTFFGIWKYPDQ 250 Query: 241 MGAWSTVHLGKWSAWSLLVMMTFTIVVHLKHIRSKIHI 278 +GAWS VH+GKWS+WSLLV+MTFTIV LKHI+ +IH+ Sbjct: 251 IGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKGRIHV 288