BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1465.p (436 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775502.1| homoserine dehydrogenase [Herbaspirillum ser... 732 0.0 ref|YP_004753107.1| homoserine dehydrogenase [Collimonas fungivo... 685 0.0 ref|YP_001353002.1| homoserine dehydrogenase [Janthinobacterium ... 665 0.0 ref|ZP_08275666.1| Homoserine dehydrogenase [Oxalobacteraceae ba... 650 0.0 ref|YP_001100410.1| homoserine dehydrogenase [Herminiimonas arse... 647 0.0 >ref|YP_003775502.1| homoserine dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ63594.1| homoserine dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 436 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 409/436 (93%), Positives = 421/436 (96%) Query: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIARRAGRGIEITMVAARNTARATELTQGEVKV 60 MKSIKVGLLGIGTVGSGTFNVLKRNQ+EIARRAGRGIEITMVA NT RATELT GEVKV Sbjct: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQEEIARRAGRGIEITMVADLNTERATELTNGEVKV 60 Query: 61 VNDGNLVVNDPEIDIVVELIGGDDIARDLVLKAIANGKHVVTANKALIAKHGNEIFKAAQ 120 VND NLVV++P+IDIV+ELIGG IA+DLVLKAIANGKHVVTANKALIA HGNEIFKAAQ Sbjct: 61 VNDANLVVSNPDIDIVIELIGGYGIAKDLVLKAIANGKHVVTANKALIATHGNEIFKAAQ 120 Query: 121 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQWVAGIINGTTNFILSEMRDKGLDFDVVL 180 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQW+AGIINGTTNFILSEMRDKGLDFDVVL Sbjct: 121 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQWIAGIINGTTNFILSEMRDKGLDFDVVL 180 Query: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE 240 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE Sbjct: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE 240 Query: 241 KLGYRIKLLGITRQTAKGIELRVHPTLIPASRLIANVEGAMNAVVVRGDAVGEALYYGKG 300 +LGYRIKLLGITRQTAKGIELRVHPTLIPA+RLIANVEGAMNAVVVRGDAVGE LYYGKG Sbjct: 241 QLGYRIKLLGITRQTAKGIELRVHPTLIPAARLIANVEGAMNAVVVRGDAVGETLYYGKG 300 Query: 301 AGSEPTASAVIADLVDITRLATADPEHHVPSLAFQLNAMADTPVLPMSEVVTSYYLRIRV 360 AGSEPTASAVIADLVDITRLATADPEH VP LAFQ NAMADTPVLPMSEV TSYYLR+RV Sbjct: 301 AGSEPTASAVIADLVDITRLATADPEHRVPYLAFQPNAMADTPVLPMSEVSTSYYLRMRV 360 Query: 361 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL 420 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL Sbjct: 361 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL 420 Query: 421 ATVVGQVTKIRLEELS 436 TV+G VTKIRLEEL+ Sbjct: 421 TTVMGTVTKIRLEELA 436 >ref|YP_004753107.1| homoserine dehydrogenase [Collimonas fungivorans Ter331] gb|AEK62284.1| Homoserine dehydrogenase [Collimonas fungivorans Ter331] Length = 436 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 380/435 (87%), Positives = 405/435 (93%) Query: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIARRAGRGIEITMVAARNTARATELTQGEVKV 60 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIA RAGR IEITMVA + RA +LT G+V V Sbjct: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIAARAGRAIEITMVADLDVERARQLTSGDVAV 60 Query: 61 VNDGNLVVNDPEIDIVVELIGGDDIARDLVLKAIANGKHVVTANKALIAKHGNEIFKAAQ 120 VND LVVN+P+IDIV+ELIGG IA+DLVL+AIANGKHVVTANKALIA HGNEIFKAAQ Sbjct: 61 VNDAKLVVNNPDIDIVIELIGGYGIAKDLVLQAIANGKHVVTANKALIATHGNEIFKAAQ 120 Query: 121 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQWVAGIINGTTNFILSEMRDKGLDFDVVL 180 EKGV+VAFEAAVAGGIPIIKALREGLTAN IQW+AGIINGTTNFILSEMRDKGLDFDVVL Sbjct: 121 EKGVIVAFEAAVAGGIPIIKALREGLTANSIQWIAGIINGTTNFILSEMRDKGLDFDVVL 180 Query: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE 240 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQF KAHVEGITKLQA+DI YAE Sbjct: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFSKAHVEGITKLQATDIRYAE 240 Query: 241 KLGYRIKLLGITRQTAKGIELRVHPTLIPASRLIANVEGAMNAVVVRGDAVGEALYYGKG 300 +LGYRIKLLGIT++TA GIELRVHPTLIP+ RLIANVEGAMNAV+VRGDAVG+ LYYGKG Sbjct: 241 QLGYRIKLLGITKRTAGGIELRVHPTLIPSKRLIANVEGAMNAVLVRGDAVGDTLYYGKG 300 Query: 301 AGSEPTASAVIADLVDITRLATADPEHHVPSLAFQLNAMADTPVLPMSEVVTSYYLRIRV 360 AG+EPTASAVIADLVDITRLATADPEH VP LAFQ NAMADTP+LPM+E+ TSYYLR+ V Sbjct: 301 AGAEPTASAVIADLVDITRLATADPEHRVPHLAFQPNAMADTPILPMAEITTSYYLRMHV 360 Query: 361 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL 420 ADQ GVLADVTRILADS+ISIDAMLQKEPA GE +TDIIMLTHQTQEKN+EAAI KIEAL Sbjct: 361 ADQPGVLADVTRILADSSISIDAMLQKEPAAGETRTDIIMLTHQTQEKNVEAAIVKIEAL 420 Query: 421 ATVVGQVTKIRLEEL 435 ATVVG VTKIRLEEL Sbjct: 421 ATVVGTVTKIRLEEL 435 >ref|YP_001353002.1| homoserine dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR88471.1| homoserine dehydrogenase [Janthinobacterium sp. Marseille] Length = 436 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 364/436 (83%), Positives = 398/436 (91%) Query: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIARRAGRGIEITMVAARNTARATELTQGEVKV 60 MK+IKVGLLGIGTVG+GTFNVLKRNQ+EI+RRAG GIEI MVA + ARA EL +V Sbjct: 1 MKTIKVGLLGIGTVGAGTFNVLKRNQEEISRRAGHGIEIVMVADLDVARAKELVGSHCEV 60 Query: 61 VNDGNLVVNDPEIDIVVELIGGDDIARDLVLKAIANGKHVVTANKALIAKHGNEIFKAAQ 120 VNDGNLVV++PE+DIVVELIGG IA+DLVLKAIANGKHVVTANKAL+A HG+EIF+AAQ Sbjct: 61 VNDGNLVVSNPEVDIVVELIGGYGIAKDLVLKAIANGKHVVTANKALLATHGDEIFQAAQ 120 Query: 121 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQWVAGIINGTTNFILSEMRDKGLDFDVVL 180 KGVMVA+EAAVAGGIPIIKALREGLTANRI+W+AGIINGTTNFILSEMRDKGLDFD VL Sbjct: 121 NKGVMVAYEAAVAGGIPIIKALREGLTANRIEWIAGIINGTTNFILSEMRDKGLDFDTVL 180 Query: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE 240 KEAQRLGYAEADPTFDIEGVDAAHK T+MA+IAFGIPVQFDKAHVEGITKL+A DI YAE Sbjct: 181 KEAQRLGYAEADPTFDIEGVDAAHKATLMAAIAFGIPVQFDKAHVEGITKLEAVDIRYAE 240 Query: 241 KLGYRIKLLGITRQTAKGIELRVHPTLIPASRLIANVEGAMNAVVVRGDAVGEALYYGKG 300 +LGYRIKLLGI ++T++GIELRVHPTLIPA RLIANVEGAMNAV+V+GDAVG LYYGKG Sbjct: 241 QLGYRIKLLGIAKRTSQGIELRVHPTLIPAKRLIANVEGAMNAVLVQGDAVGATLYYGKG 300 Query: 301 AGSEPTASAVIADLVDITRLATADPEHHVPSLAFQLNAMADTPVLPMSEVVTSYYLRIRV 360 AG+EPTASAVIADLVDI RLA ADP H VP LAFQ NAMADTP+LP+SEV TSYYLR+ V Sbjct: 301 AGAEPTASAVIADLVDIARLADADPAHRVPHLAFQPNAMADTPILPISEVTTSYYLRMHV 360 Query: 361 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL 420 AD+ GVLA+VT ILADSTISIDAMLQKEPA GE QTDIIMLTHQTQEKN+EAAI KIEAL Sbjct: 361 ADKLGVLANVTSILADSTISIDAMLQKEPALGETQTDIIMLTHQTQEKNVEAAIKKIEAL 420 Query: 421 ATVVGQVTKIRLEELS 436 TV+GQVTKIRLE LS Sbjct: 421 PTVMGQVTKIRLEHLS 436 >ref|ZP_08275666.1| Homoserine dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30871.1| Homoserine dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 436 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 354/435 (81%), Positives = 391/435 (89%) Query: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIARRAGRGIEITMVAARNTARATELTQGEVKV 60 MK IKVGLLGIGTVG+GTFNVLKRN +EI RRAGR IEI MVA N RA LT E +V Sbjct: 1 MKPIKVGLLGIGTVGAGTFNVLKRNAEEITRRAGRRIEIAMVADLNVERARALTNNECEV 60 Query: 61 VNDGNLVVNDPEIDIVVELIGGDDIARDLVLKAIANGKHVVTANKALIAKHGNEIFKAAQ 120 V+D NLVVN P+IDIV+ELIGG IA+ LVL+AIANGKHVVTANKAL+A HGNEIFKAAQ Sbjct: 61 VDDANLVVNHPDIDIVIELIGGYGIAKSLVLQAIANGKHVVTANKALLALHGNEIFKAAQ 120 Query: 121 EKGVMVAFEAAVAGGIPIIKALREGLTANRIQWVAGIINGTTNFILSEMRDKGLDFDVVL 180 EKGV+VAFEAAVAGGIPIIK+LREGLTANRIQW+AGIINGTTNFILSEMRD+GLDF+ L Sbjct: 121 EKGVIVAFEAAVAGGIPIIKSLREGLTANRIQWIAGIINGTTNFILSEMRDRGLDFNTAL 180 Query: 181 KEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYAE 240 EAQ+LGYAEADPTFDIEG+DAAHK T+MASIAFGIPVQFDKAHVEGIT+LQA DI+YAE Sbjct: 181 LEAQQLGYAEADPTFDIEGIDAAHKATLMASIAFGIPVQFDKAHVEGITQLQAIDISYAE 240 Query: 241 KLGYRIKLLGITRQTAKGIELRVHPTLIPASRLIANVEGAMNAVVVRGDAVGEALYYGKG 300 +LGYRIKLLGIT++T GIELRVHPTLIPA RLIANVEGAMNAVVV+GDAVG LYYGKG Sbjct: 241 QLGYRIKLLGITKRTPLGIELRVHPTLIPAKRLIANVEGAMNAVVVQGDAVGATLYYGKG 300 Query: 301 AGSEPTASAVIADLVDITRLATADPEHHVPSLAFQLNAMADTPVLPMSEVVTSYYLRIRV 360 AG+EPTASAVIADLVDITRL TA+P H VP LAFQ +AM DTP+LPMSE+ TSYYLR+ V Sbjct: 301 AGAEPTASAVIADLVDITRLFTAEPGHRVPHLAFQPDAMTDTPILPMSEITTSYYLRLHV 360 Query: 361 ADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEAL 420 AD+ GVLA VTRILADS ISIDAMLQKEPA+GE QTDIIMLTHQTQEK ++ AIA+IEAL Sbjct: 361 ADKLGVLAAVTRILADSDISIDAMLQKEPADGETQTDIIMLTHQTQEKRVDVAIARIEAL 420 Query: 421 ATVVGQVTKIRLEEL 435 ATV+G+VT+IRLEEL Sbjct: 421 ATVIGKVTRIRLEEL 435 >ref|YP_001100410.1| homoserine dehydrogenase [Herminiimonas arsenicoxydans] emb|CAL62287.1| Homoserine dehydrogenase [Herminiimonas arsenicoxydans] Length = 437 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 355/437 (81%), Positives = 392/437 (89%), Gaps = 1/437 (0%) Query: 1 MKSIKVGLLGIGTVGSGTFNVLKRNQQEIARRAGRGIEITMVAARNTARATELT-QGEVK 59 MKSIKVGLLG GTVG+GTFN+LKRNQ+EI+RRAG IEI MVA + ARA EL E + Sbjct: 1 MKSIKVGLLGAGTVGAGTFNILKRNQEEISRRAGHKIEIVMVADLDLARAKELVGSAECE 60 Query: 60 VVNDGNLVVNDPEIDIVVELIGGDDIARDLVLKAIANGKHVVTANKALIAKHGNEIFKAA 119 VVNDGNLVVN P+I+IVVELIGG IA+DLVLKAIANGKHVVTANKAL+A HG+EIFKAA Sbjct: 61 VVNDGNLVVNHPDIEIVVELIGGYGIAKDLVLKAIANGKHVVTANKALLAVHGDEIFKAA 120 Query: 120 QEKGVMVAFEAAVAGGIPIIKALREGLTANRIQWVAGIINGTTNFILSEMRDKGLDFDVV 179 Q+KGVMVA+EAAVAGGIPIIKALREGLTANRI+W+AGIINGTTNFILSEMRDKGLDFD V Sbjct: 121 QDKGVMVAYEAAVAGGIPIIKALREGLTANRIEWIAGIINGTTNFILSEMRDKGLDFDTV 180 Query: 180 LKEAQRLGYAEADPTFDIEGVDAAHKLTIMASIAFGIPVQFDKAHVEGITKLQASDITYA 239 LKEAQRLGYAEADPTFDIEGVDAAHK T+MASIAFGIPVQFDKAH+EGITKL+A DI YA Sbjct: 181 LKEAQRLGYAEADPTFDIEGVDAAHKATLMASIAFGIPVQFDKAHIEGITKLEAIDIRYA 240 Query: 240 EKLGYRIKLLGITRQTAKGIELRVHPTLIPASRLIANVEGAMNAVVVRGDAVGEALYYGK 299 E+LGYRIKLLGI ++T +GIELRVHPTLIPA RLIANVEGAMNAVVV+GDAVG LYYGK Sbjct: 241 EQLGYRIKLLGIAKRTPQGIELRVHPTLIPAKRLIANVEGAMNAVVVQGDAVGATLYYGK 300 Query: 300 GAGSEPTASAVIADLVDITRLATADPEHHVPSLAFQLNAMADTPVLPMSEVVTSYYLRIR 359 GAG+EPT SAVIADLVDI RLA ADP H VP LAFQ NAM+ P+LP+SEV TSYYLR+ Sbjct: 301 GAGAEPTGSAVIADLVDIARLADADPAHRVPHLAFQPNAMSALPILPISEVTTSYYLRLH 360 Query: 360 VADQAGVLADVTRILADSTISIDAMLQKEPAEGEQQTDIIMLTHQTQEKNIEAAIAKIEA 419 V+D+ GVLA+VT ILA+STIS+DAMLQKEP GE QTDII+LTHQTQEKN+EAAI+KIEA Sbjct: 361 VSDKLGVLANVTSILAESTISVDAMLQKEPELGESQTDIIILTHQTQEKNVEAAISKIEA 420 Query: 420 LATVVGQVTKIRLEELS 436 L TV G+VTKIRLE LS Sbjct: 421 LPTVHGKVTKIRLEHLS 437