BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1455.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775492.1| xylanase/chitin deacetylase [Herbaspirillum ... 578 e-163 ref|YP_004753116.1| polymyxin resistance protein PmrJ deacetylas... 471 e-131 ref|ZP_08275949.1| Polymyxin resistance protein [Oxalobacteracea... 461 e-128 ref|YP_004029063.1| Chitooligosaccharide deacetylase [Burkholder... 398 e-109 ref|ZP_03588093.1| polysaccharide deacetylase family protein [Bu... 389 e-106 >ref|YP_003775492.1| xylanase/chitin deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ63584.1| xylanase/chitin deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 273/313 (87%), Positives = 291/313 (92%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQIFRPGFFSK 75 +P++TLKIDADTYRGTR GVPNL+ QL RH A ATFLFSLGPDHTGWALKQIFRPGFFSK Sbjct: 1 MPKLTLKIDADTYRGTRVGVPNLISQLRRHGAGATFLFSLGPDHTGWALKQIFRPGFFSK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRSARDAGFECGIHTWDHRVWQDDVRT 135 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMR A AGFECGIHTWDHRVWQD+VRT Sbjct: 61 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRQAHAAGFECGIHTWDHRVWQDNVRT 120 Query: 136 ADAQWTVETMHKSHARYREIFGEAPRTHGAAGWQMNDHAFVQLDQFGMAYSSDGRSQLRE 195 ADAQWT ETM +++ RY +IFG APRTHGAAGWQMNDHAFVQLDQFG+AYSSDGRSQLRE Sbjct: 121 ADAQWTTETMQQAYGRYHDIFGHAPRTHGAAGWQMNDHAFVQLDQFGIAYSSDGRSQLRE 180 Query: 196 NGRLADADAGPHRLSAFGKPLSCVQLPTTLPTLDEILGREIGGKMIDAGNAAEFLLQLTK 255 +G LAD DAGPHRLS FGKPLSCVQLPTTLPTLDEILGR I GK+IDAGNAAE LL+LTK Sbjct: 181 DGSLADQDAGPHRLSVFGKPLSCVQLPTTLPTLDEILGRTIRGKLIDAGNAAELLLELTK 240 Query: 256 EPRDHVFTLHAELEGQKLGPIFEQLLTGWRAQGYELVSMGDYYQSIKNDVLPILPIAWGE 315 PRDHVFTLHAELEGQKL PIFE+LL GWRAQGYELVSMGDYYQSI+NDVLPILPI+WGE Sbjct: 241 TPRDHVFTLHAELEGQKLAPIFERLLAGWRAQGYELVSMGDYYQSIQNDVLPILPISWGE 300 Query: 316 LPGRSGEMIVQAM 328 LPGRSG+MI+QAM Sbjct: 301 LPGRSGDMILQAM 313 >ref|YP_004753116.1| polymyxin resistance protein PmrJ deacetylase [Collimonas fungivorans Ter331] gb|AEK62293.1| Polymyxin resistance protein PmrJ, putative deacetylase [Collimonas fungivorans Ter331] Length = 315 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 219/312 (70%), Positives = 258/312 (82%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQIFRPGFFSK 75 +P +TLKIDADTYRGTREGVPNLV+ L ++ A ATFLFSLG DHTGWALKQ+FRPGFF K Sbjct: 1 MPLLTLKIDADTYRGTREGVPNLVRLLSKYQARATFLFSLGHDHTGWALKQVFRPGFFQK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRSARDAGFECGIHTWDHRVWQDDVRT 135 VSRTSVVEHYG+KTLMYG LLPAPDIGKTCA++M++ RDAGFECG+HTWDHRVWQD VR Sbjct: 61 VSRTSVVEHYGLKTLMYGVLLPAPDIGKTCANYMQAVRDAGFECGVHTWDHRVWQDHVRQ 120 Query: 136 ADAQWTVETMHKSHARYREIFGEAPRTHGAAGWQMNDHAFVQLDQFGMAYSSDGRSQLRE 195 A WT + M +S R+ +IFG+AP THGAAGWQMN +AF QL++FG+AY+SDGR+ L + Sbjct: 121 RGADWTSQQMQRSFDRFTQIFGQAPNTHGAAGWQMNPYAFEQLEKFGIAYASDGRAMLAD 180 Query: 196 NGRLADADAGPHRLSAFGKPLSCVQLPTTLPTLDEILGREIGGKMIDAGNAAEFLLQLTK 255 +G LAD AGPHRL GK L+C+QLPTTLPTLDE+LGR GG + N A +L LT Sbjct: 181 DGALADQAAGPHRLQVNGKTLACIQLPTTLPTLDELLGRSFGGVELTPANIAAHILALTA 240 Query: 256 EPRDHVFTLHAELEGQKLGPIFEQLLTGWRAQGYELVSMGDYYQSIKNDVLPILPIAWGE 315 PRDHVFTLHAELEGQKL PIFEQLL W+AQGY+LV+M DYY+ +K+ LP +P+AW E Sbjct: 241 TPRDHVFTLHAELEGQKLAPIFEQLLQAWKAQGYDLVAMEDYYRQVKDQQLPTVPLAWAE 300 Query: 316 LPGRSGEMIVQA 327 LPGRSGEMI+QA Sbjct: 301 LPGRSGEMIMQA 312 >ref|ZP_08275949.1| Polymyxin resistance protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30573.1| Polymyxin resistance protein [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 215/312 (68%), Positives = 255/312 (81%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQIFRPGFFSK 75 +P ITLKID DT+RGTREGVPNLV+ L +HDA+ATFLFSLGPDHTGWAL++ FRPGFF K Sbjct: 1 MPLITLKIDVDTFRGTREGVPNLVRMLQKHDAHATFLFSLGPDHTGWALRRAFRPGFFQK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRSARDAGFECGIHTWDHRVWQDDVRT 135 VSRTSV+EHYG+KTLMYG LLPAPDIG+ CA +R+ AGFECGIHTWDH VWQD VR Sbjct: 61 VSRTSVLEHYGLKTLMYGVLLPAPDIGQLCATQLRAVHQAGFECGIHTWDHVVWQDHVRQ 120 Query: 136 ADAQWTVETMHKSHARYREIFGEAPRTHGAAGWQMNDHAFVQLDQFGMAYSSDGRSQLRE 195 DA WT + M +SH R+ IFG AP+THGAAGWQMN HAF QLD FG+AY+SD R+QL + Sbjct: 121 QDAAWTQDLMQRSHERFVAIFGHAPQTHGAAGWQMNPHAFRQLDAFGIAYASDERAQLND 180 Query: 196 NGRLADADAGPHRLSAFGKPLSCVQLPTTLPTLDEILGREIGGKMIDAGNAAEFLLQLTK 255 +G L ADAGPHRLS G+ LSC+Q+PTTLPTLDE+LGR I G+++ N A LL+LT Sbjct: 181 DGSLLHADAGPHRLSVDGQTLSCIQMPTTLPTLDELLGRTIDGELVTTANIAALLLRLTA 240 Query: 256 EPRDHVFTLHAELEGQKLGPIFEQLLTGWRAQGYELVSMGDYYQSIKNDVLPILPIAWGE 315 PRDHV+TLHAELEGQKL PIF++LL+GWRAQGY L SM DY+Q+I LP+ PI WG Sbjct: 241 SPRDHVYTLHAELEGQKLAPIFDELLSGWRAQGYTLASMADYHQAIGQRALPVNPIDWGT 300 Query: 316 LPGRSGEMIVQA 327 LPGRSG++++QA Sbjct: 301 LPGRSGDLLLQA 312 >ref|YP_004029063.1| Chitooligosaccharide deacetylase [Burkholderia rhizoxinica HKI 454] emb|CBW74919.1| Chitooligosaccharide deacetylase (EC 3.5.1.-) [Burkholderia rhizoxinica HKI 454] Length = 301 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 198/310 (63%), Positives = 234/310 (75%), Gaps = 17/310 (5%) Query: 18 QITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQIFRPGFFSKVS 77 +I LKID DT RGTREGVPNLV+ L A ATFLFSLGPDHTGWAL+++FRPGF KVS Sbjct: 6 RIVLKIDVDTLRGTREGVPNLVRMLRHAGAGATFLFSLGPDHTGWALRRVFRPGFLRKVS 65 Query: 78 RTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRSARDAGFECGIHTWDHRVWQDDVRTAD 137 RTSV+EHYG+KTL YG LLP PDIG A MR+ RDAGFE GIHTWDH WQD+VRT + Sbjct: 66 RTSVLEHYGLKTLAYGVLLPGPDIGARAAAQMRATRDAGFEVGIHTWDHVYWQDNVRTRE 125 Query: 138 AQWTVETMHKSHARYREIFGEAPRTHGAAGWQMNDHAFVQLDQFGMAYSSDGRSQLRENG 197 WT+ M KSHAR+ E+FGEAPRTHGAAGWQMNDHAF QLD +G+ Y+SDGR Sbjct: 126 RAWTIAQMAKSHARFVEVFGEAPRTHGAAGWQMNDHAFHQLDAWGIRYASDGRGH----- 180 Query: 198 RLADADAGPHRLSAFGKPLSCVQLPTTLPTLDEILGREIGGKMIDAGNAAEFLLQLTK-E 256 GP+R + G PL+ VQLPTTLPTLDE+LG + G +D N A++LL LT+ + Sbjct: 181 -------GPYRPTVNGMPLAHVQLPTTLPTLDEVLG--LDGLSVD--NVADYLLSLTRHD 229 Query: 257 PRDHVFTLHAELEGQKLGPIFEQLLTGWRAQGYELVSMGDYYQSIKNDVLPILPIAWGEL 316 DHVFTLHAELEGQKL P+ E+LL GWR QG+ LVSM DYY ++ D LP P+AWGE+ Sbjct: 230 GVDHVFTLHAELEGQKLAPVLERLLAGWRVQGHTLVSMADYYATLDLDSLPSYPVAWGEV 289 Query: 317 PGRSGEMIVQ 326 PGR+GE+I+Q Sbjct: 290 PGRAGELIIQ 299 >ref|ZP_03588093.1| polysaccharide deacetylase family protein [Burkholderia multivorans CGD1] gb|EED97541.1| polysaccharide deacetylase family protein [Burkholderia multivorans CGD1] Length = 298 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 192/312 (61%), Positives = 224/312 (71%), Gaps = 17/312 (5%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQIFRPGFFSK 75 + +I LKID DT RGTREGVPNL + R +A ATFLFSLGPDHTGWAL+++FRPGF K Sbjct: 1 MARIVLKIDVDTLRGTREGVPNLARIFDRFNARATFLFSLGPDHTGWALRRVFRPGFLKK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRSARDAGFECGIHTWDHRVWQDDVRT 135 VSRTSVVEHYG+K LMYG LLP PDIG+ MR+ +AGFECGIHTWDH WQD+VR Sbjct: 61 VSRTSVVEHYGVKQLMYGVLLPGPDIGRRAIADMRAIHEAGFECGIHTWDHVYWQDNVRV 120 Query: 136 ADAQWTVETMHKSHARYREIFGEAPRTHGAAGWQMNDHAFVQLDQFGMAYSSDGRSQLRE 195 D WTV M KSHAR+ EIFG P THGAAGWQMND AF Q+D +GM Y+SDGR Sbjct: 121 RDRDWTVREMQKSHARFAEIFGAPPVTHGAAGWQMNDAAFEQIDAWGMRYASDGRGH--- 177 Query: 196 NGRLADADAGPHRLSAFGKPLSCVQLPTTLPTLDEILGREIGGKMIDAGNAAEFLLQLTK 255 P+ G+ LS VQ+PTTLPTLDE+LG + ID N A +LQ T+ Sbjct: 178 ---------SPYLPVVRGRTLSHVQMPTTLPTLDEVLGVD----GIDMHNVAAHILQFTE 224 Query: 256 -EPRDHVFTLHAELEGQKLGPIFEQLLTGWRAQGYELVSMGDYYQSIKNDVLPILPIAWG 314 P D VFTLHAELEGQKL P+FEQLL GWRAQG+ +MGDY+ ++ D LP P+AWG Sbjct: 225 TNPHDQVFTLHAELEGQKLAPVFEQLLAGWRAQGHTFATMGDYHATLDRDSLPSYPVAWG 284 Query: 315 ELPGRSGEMIVQ 326 E+PGRSGE+IVQ Sbjct: 285 EIPGRSGELIVQ 296